RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 OR2G2Q8NGZ5 317 aa12.21□□□□□ -0.45
LIMS1-205ENST00000410093 ZNF671Q8TAW3 534 aa12.21□□□□□ -0.45
LIMS1-205ENST00000410093 RHBDD1Q8TEB9 315 aa12.21□□□□□ -0.45
LIMS1-205ENST00000410093 CREB3L1Q96BA8 519 aa12.21□□□□□ -0.45
LIMS1-205ENST00000410093 ZBTB8AQ96BR9 441 aa12.21□□□□□ -0.45
LIMS1-205ENST00000410093 CNTNAP3BQ96NU0 1288 aa12.21□□□□□ -0.45
LIMS1-205ENST00000410093 TSSK2Q96PF2 358 aa12.21□□□□□ -0.45
LIMS1-205ENST00000410093 CDC6Q99741 560 aa12.21□□□□□ -0.45
LIMS1-205ENST00000410093 PDCD1LG2Q9BQ51 273 aa12.21□□□□□ -0.45
LIMS1-205ENST00000410093 THAP7Q9BT49 309 aaPredicted RBP12.21□□□□□ -0.45
LIMS1-205ENST00000410093 CNTNAP3Q9BZ76 1288 aa12.21□□□□□ -0.45
LIMS1-205ENST00000410093 NOX4Q9NPH5 578 aa12.21□□□□□ -0.45
LIMS1-205ENST00000410093 KLHL9Q9P2J3 617 aa12.21□□□□□ -0.45
LIMS1-205ENST00000410093 IKZF2Q9UKS7 526 aa12.21□□□□□ -0.45
LIMS1-205ENST00000410093 NPIPA1Q9UND3 350 aa12.21□□□□□ -0.45
LIMS1-205ENST00000410093 NCOR2Q9Y618 2525 aa12.21□□□□□ -0.45
LIMS1-205ENST00000410093 PCNX3Q9H6A9 2034 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 OR4C45A6NMZ5 311 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 IFITM5A6NNB3 132 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 DCTN6O00399 190 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 ZNF593O00488 134 aaPredicted RBP12.21□□□□□ -0.46
LIMS1-205ENST00000410093 DVL2O14641 736 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 SLC16A7O60669 478 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 SLC43A1O75387 559 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 CCNKO75909 580 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 DKK1O94907 266 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 AKR7A3O95154 331 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 EIF4EP06730 217 aaKnown RBP12.21□□□□□ -0.46
LIMS1-205ENST00000410093 OR8G3PP0DMU2 310 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 NR2C1P13056 603 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 DDOSTP39656 456 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 PSMB10P40306 273 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 RAB25P57735 213 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 OR10A3P58181 314 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 NANOS3P60323 173 aaKnown RBP12.21□□□□□ -0.46
LIMS1-205ENST00000410093 GPR85P60893 370 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 BTG1P62324 171 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 TLE3Q04726 772 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 SLC17A1Q14916 467 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 PCOLCEQ15113 449 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 PLPPR5Q32ZL2 321 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 C3orf33Q6P1S2 294 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 CELF2-AS1Q8N7Q2 184 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 NLGN4YQ8NFZ3 816 aaPredicted RBP12.21□□□□□ -0.46
LIMS1-205ENST00000410093 RNF128Q8TEB7 428 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 THEM6Q8WUY1 208 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 DEDD2Q8WXF8 326 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 ASB10Q8WXI3 467 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 RNF166Q96A37 237 aaPredicted RBP12.21□□□□□ -0.46
LIMS1-205ENST00000410093 CMKLR1Q99788 373 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 KLHDC3Q9BQ90 382 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 MARVELD1Q9BSK0 173 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 HDHD2Q9H0R4 259 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 BRD7Q9NPI1 651 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 FRRS1LQ9P0K9 344 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 ZNF221Q9UK13 617 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 RPH3AQ9Y2J0 694 aaPredicted RBP12.21□□□□□ -0.46
LIMS1-205ENST00000410093 HDGFL3Q9Y3E1 203 aa12.21□□□□□ -0.46
LIMS1-205ENST00000410093 TRBV5-7A0A0A0MS05 114 aa12.2□□□□□ -0.46
LIMS1-205ENST00000410093 IGHV1-45A0A0A0MS14 117 aa12.2□□□□□ -0.46
LIMS1-205ENST00000410093 A0A0G2JMP0 313 aa12.2□□□□□ -0.46
LIMS1-205ENST00000410093 A0A0X1KG70 313 aa12.2□□□□□ -0.46
LIMS1-205ENST00000410093 LOC102725191A0A1B0GVB3 256 aa12.2□□□□□ -0.46
LIMS1-205ENST00000410093 LIPT2A6NK58 231 aa12.2□□□□□ -0.46
LIMS1-205ENST00000410093 FAM171A2A8MVW0 826 aa12.2□□□□□ -0.46
LIMS1-205ENST00000410093 MS4A18H0YCH9 400 aa12.2□□□□□ -0.46
LIMS1-205ENST00000410093 GMFGO60234 142 aa12.2□□□□□ -0.46
LIMS1-205ENST00000410093 KHDRBS3O75525 346 aaKnown RBP12.2□□□□□ -0.46
LIMS1-205ENST00000410093 OR2J2O76002 312 aa12.2□□□□□ -0.46
LIMS1-205ENST00000410093 LDOC1O95751 146 aaPredicted RBP12.2□□□□□ -0.46
LIMS1-205ENST00000410093 HLA-DQA2P01906 255 aa12.2□□□□□ -0.46
LIMS1-205ENST00000410093 IMPDH2P12268 514 aa12.2□□□□□ -0.46
LIMS1-205ENST00000410093 ICAM2P13598 275 aa12.2□□□□□ -0.46
LIMS1-205ENST00000410093 ZNF823P16415 610 aa12.2□□□□□ -0.46
LIMS1-205ENST00000410093 ATF1P18846 271 aa12.2□□□□□ -0.46
LIMS1-205ENST00000410093 MNDAP41218 407 aa12.2□□□□□ -0.46
LIMS1-205ENST00000410093 RIDAP52758 137 aaKnown RBP12.2□□□□□ -0.46
LIMS1-205ENST00000410093 INSM1Q01101 510 aaPredicted RBP12.2□□□□□ -0.46
LIMS1-205ENST00000410093 CBX3Q13185 183 aa12.2□□□□□ -0.46
LIMS1-205ENST00000410093 PCK2Q16822 640 aa12.2□□□□□ -0.46
LIMS1-205ENST00000410093 MS4A18Q3C1V0 323 aa12.2□□□□□ -0.46
LIMS1-205ENST00000410093 SLC25A35Q3KQZ1 300 aa12.2□□□□□ -0.46
LIMS1-205ENST00000410093 FAM69BQ5VUD6 431 aa12.2□□□□□ -0.46
LIMS1-205ENST00000410093 ZNF57Q68EA5 555 aaPredicted RBP12.2□□□□□ -0.46
LIMS1-205ENST00000410093 DBX2Q6ZNG2 339 aa12.2□□□□□ -0.46
LIMS1-205ENST00000410093 ARMC10Q8N2F6 343 aa12.2□□□□□ -0.46
LIMS1-205ENST00000410093 GHDCQ8N2G8 530 aa12.2□□□□□ -0.46
LIMS1-205ENST00000410093 ZNF676Q8N7Q3 588 aa12.2□□□□□ -0.46
LIMS1-205ENST00000410093 FADS6Q8N9I5 356 aa12.2□□□□□ -0.46
LIMS1-205ENST00000410093 OR4M2Q8NGB6 313 aa12.2□□□□□ -0.46
LIMS1-205ENST00000410093 OR2Y1Q8NGV0 311 aa12.2□□□□□ -0.46
LIMS1-205ENST00000410093 C4orf45Q96LM5 186 aa12.2□□□□□ -0.46
LIMS1-205ENST00000410093 NEDD4LQ96PU5 975 aa12.2□□□□□ -0.46
LIMS1-205ENST00000410093 RASL10BQ96S79 203 aa12.2□□□□□ -0.46
LIMS1-205ENST00000410093 ABCG5Q9H222 651 aa12.2□□□□□ -0.46
LIMS1-205ENST00000410093 APMAPQ9HDC9 416 aa12.2□□□□□ -0.46
LIMS1-205ENST00000410093 MED11Q9P086 117 aa12.2□□□□□ -0.46
LIMS1-205ENST00000410093 TRABD2BA6NFA1 517 aa12.19□□□□□ -0.46
LIMS1-205ENST00000410093 TVP23AA6NH52 213 aa12.19□□□□□ -0.46
LIMS1-205ENST00000410093 DCTDP32321 178 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms