RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 NIPSNAP1Q9BPW8 284 aa19.5■□□□□ 0.71
PTCD3-203ENST00000409783 PLA2G12AQ9BZM1 189 aa19.5■□□□□ 0.71
PTCD3-203ENST00000409783 NOX3Q9HBY0 568 aa19.5■□□□□ 0.71
PTCD3-203ENST00000409783 RNF115Q9Y4L5 304 aa19.5■□□□□ 0.71
PTCD3-203ENST00000409783 AP4S1Q9Y587 144 aa19.5■□□□□ 0.71
PTCD3-203ENST00000409783 SLC22A23A1A5C7 686 aa19.49■□□□□ 0.71
PTCD3-203ENST00000409783 PRSS37A4D1T9 235 aa19.49■□□□□ 0.71
PTCD3-203ENST00000409783 M0R1B8 84 aa19.49■□□□□ 0.71
PTCD3-203ENST00000409783 IMPA2O14732 288 aa19.49■□□□□ 0.71
PTCD3-203ENST00000409783 AHCYL1O43865 530 aa19.49■□□□□ 0.71
PTCD3-203ENST00000409783 IGKV3-15P01624 115 aa19.49■□□□□ 0.71
PTCD3-203ENST00000409783 IGLV1-44P01699 117 aa19.49■□□□□ 0.71
PTCD3-203ENST00000409783 CD3EP07766 207 aa19.49■□□□□ 0.71
PTCD3-203ENST00000409783 NR2C1P13056 603 aa19.49■□□□□ 0.71
PTCD3-203ENST00000409783 CBR1P16152 277 aa19.49■□□□□ 0.71
PTCD3-203ENST00000409783 PAX7P23759 505 aa19.49■□□□□ 0.71
PTCD3-203ENST00000409783 PTAFRP25105 342 aa19.49■□□□□ 0.71
PTCD3-203ENST00000409783 RPS6KA3P51812 740 aa19.49■□□□□ 0.71
PTCD3-203ENST00000409783 ACTR3P61158 418 aa19.49■□□□□ 0.71
PTCD3-203ENST00000409783 ADAM5Q6NVV9 412 aa19.49■□□□□ 0.71
PTCD3-203ENST00000409783 KLHL17Q6TDP4 642 aa19.49■□□□□ 0.71
PTCD3-203ENST00000409783 TMEM108Q6UXF1 575 aa19.49■□□□□ 0.71
PTCD3-203ENST00000409783 SKA3Q8IX90 412 aa19.49■□□□□ 0.71
PTCD3-203ENST00000409783 SLC22A24Q8N4F4 322 aa19.49■□□□□ 0.71
PTCD3-203ENST00000409783 FGFBP3Q8TAT2 258 aa19.49■□□□□ 0.71
PTCD3-203ENST00000409783 FNDC8Q8TC99 324 aa19.49■□□□□ 0.71
PTCD3-203ENST00000409783 NABP1Q96AH0 204 aa19.49■□□□□ 0.71
PTCD3-203ENST00000409783 ZNF75AQ96N20 296 aa19.49■□□□□ 0.71
PTCD3-203ENST00000409783 RBP7Q96R05 134 aa19.49■□□□□ 0.71
PTCD3-203ENST00000409783 PDP1Q9P0J1 537 aaPredicted RBP19.49■□□□□ 0.71
PTCD3-203ENST00000409783 IGHV1-18A0A0C4DH31 117 aa19.48■□□□□ 0.71
PTCD3-203ENST00000409783 SHISA9B4DS77 424 aa19.48■□□□□ 0.71
PTCD3-203ENST00000409783 DEAF1O75398 565 aaPredicted RBP19.48■□□□□ 0.71
PTCD3-203ENST00000409783 HLA-HP01893 362 aa19.48■□□□□ 0.71
PTCD3-203ENST00000409783 IGFBP1P08833 259 aaPredicted RBP19.48■□□□□ 0.71
PTCD3-203ENST00000409783 GSTM3P21266 225 aa19.48■□□□□ 0.71
PTCD3-203ENST00000409783 CDKN2AP42771 156 aaKnown RBP19.48■□□□□ 0.71
PTCD3-203ENST00000409783 ZNF84P51523 738 aa19.48■□□□□ 0.71
PTCD3-203ENST00000409783 SPOCK1Q08629 439 aa19.48■□□□□ 0.71
PTCD3-203ENST00000409783 KPNB1Q14974 876 aaKnown RBP19.48■□□□□ 0.71
PTCD3-203ENST00000409783 ATP6AP1Q15904 470 aa19.48■□□□□ 0.71
PTCD3-203ENST00000409783 C3orf36Q3SXR2 165 aa19.48■□□□□ 0.71
PTCD3-203ENST00000409783 NRN1LQ496H8 165 aa19.48■□□□□ 0.71
PTCD3-203ENST00000409783 FOXL2NBQ6ZUU3 175 aa19.48■□□□□ 0.71
PTCD3-203ENST00000409783 MDP1Q86V88 176 aa19.48■□□□□ 0.71
PTCD3-203ENST00000409783 MYPOPQ86VE0 399 aaPredicted RBP19.48■□□□□ 0.71
PTCD3-203ENST00000409783 KBTBD8Q8NFY9 601 aa19.48■□□□□ 0.71
PTCD3-203ENST00000409783 ERMAPQ96PL5 475 aaPredicted RBP19.48■□□□□ 0.71
PTCD3-203ENST00000409783 VSX1Q9NZR4 365 aaPredicted RBP19.48■□□□□ 0.71
PTCD3-203ENST00000409783 REV1Q9UBZ9 1251 aa19.48■□□□□ 0.71
PTCD3-203ENST00000409783 PLCE1Q9P212 2302 aa19.48■□□□□ 0.71
PTCD3-203ENST00000409783 BHLHE40O14503 412 aa19.47■□□□□ 0.71
PTCD3-203ENST00000409783 SOCS2O14508 198 aa19.47■□□□□ 0.71
PTCD3-203ENST00000409783 XKRYO14609 159 aa19.47■□□□□ 0.71
PTCD3-203ENST00000409783 ABCD4O14678 606 aa19.47■□□□□ 0.71
PTCD3-203ENST00000409783 E2F6O75461 281 aa19.47■□□□□ 0.71
PTCD3-203ENST00000409783 OR8G3PP0DMU2 310 aa19.47■□□□□ 0.71
PTCD3-203ENST00000409783 PRKACGP22612 351 aa19.47■□□□□ 0.71
PTCD3-203ENST00000409783 CDAP32320 146 aa19.47■□□□□ 0.71
PTCD3-203ENST00000409783 MRPS34P82930 218 aaKnown RBP19.47■□□□□ 0.71
PTCD3-203ENST00000409783 RPL13AP3Q6NVV1 102 aa19.47■□□□□ 0.71
PTCD3-203ENST00000409783 PAMR1Q6UXH9 720 aa19.47■□□□□ 0.71
PTCD3-203ENST00000409783 ADCK1Q86TW2 530 aa19.47■□□□□ 0.71
PTCD3-203ENST00000409783 CDH24Q86UP0 819 aa19.47■□□□□ 0.71
PTCD3-203ENST00000409783 NSMAFQ92636 917 aa19.47■□□□□ 0.71
PTCD3-203ENST00000409783 NEUROG1Q92886 237 aa19.47■□□□□ 0.71
PTCD3-203ENST00000409783 SLC38A2Q96QD8 506 aa19.47■□□□□ 0.71
PTCD3-203ENST00000409783 IFT27Q9BW83 186 aa19.47■□□□□ 0.71
PTCD3-203ENST00000409783 SEC61A2Q9H9S3 476 aa19.47■□□□□ 0.71
PTCD3-203ENST00000409783 ST6GALNAC2Q9UJ37 374 aa19.47■□□□□ 0.71
PTCD3-203ENST00000409783 DSCAMO60469 2012 aa19.46■□□□□ 0.71
PTCD3-203ENST00000409783 CELA3BP08861 270 aa19.46■□□□□ 0.71
PTCD3-203ENST00000409783 CTLA4P16410 223 aa19.46■□□□□ 0.71
PTCD3-203ENST00000409783 COX10Q12887 443 aa19.46■□□□□ 0.71
PTCD3-203ENST00000409783 ETFDHQ16134 617 aa19.46■□□□□ 0.71
PTCD3-203ENST00000409783 CLEC12AQ5QGZ9 265 aa19.46■□□□□ 0.71
PTCD3-203ENST00000409783 SHQ1Q6PI26 577 aaKnown RBP19.46■□□□□ 0.71
PTCD3-203ENST00000409783 NRBF2Q96F24 287 aa19.46■□□□□ 0.71
PTCD3-203ENST00000409783 SH3GL3Q99963 347 aa19.46■□□□□ 0.71
PTCD3-203ENST00000409783 SYT4Q9H2B2 425 aa19.46■□□□□ 0.71
PTCD3-203ENST00000409783 MOV10Q9HCE1 1003 aaKnown RBP19.46■□□□□ 0.71
PTCD3-203ENST00000409783 HS3ST1O14792 307 aa19.45■□□□□ 0.7
PTCD3-203ENST00000409783 IDH3BO43837 385 aa19.45■□□□□ 0.7
PTCD3-203ENST00000409783 SOX14O95416 240 aa19.45■□□□□ 0.7
PTCD3-203ENST00000409783 CECR9P0C854 216 aa19.45■□□□□ 0.7
PTCD3-203ENST00000409783 PATE4P0C8F1 98 aa19.45■□□□□ 0.7
PTCD3-203ENST00000409783 HIST1H1CP16403 213 aaKnown RBP19.45■□□□□ 0.7
PTCD3-203ENST00000409783 FASP25445 335 aa19.45■□□□□ 0.7
PTCD3-203ENST00000409783 ARR3P36575 388 aa19.45■□□□□ 0.7
PTCD3-203ENST00000409783 CAPZA2P47755 286 aa19.45■□□□□ 0.7
PTCD3-203ENST00000409783 ZNF672Q499Z4 452 aaPredicted RBP19.45■□□□□ 0.7
PTCD3-203ENST00000409783 ZNF362Q5T0B9 420 aaPredicted RBP19.45■□□□□ 0.7
PTCD3-203ENST00000409783 LRTOMTQ8WZ04 291 aa19.45■□□□□ 0.7
PTCD3-203ENST00000409783 AKAP1Q92667 903 aaKnown RBP eCLIP19.45■□□□□ 0.7
PTCD3-203ENST00000409783 SNX18Q96RF0 628 aa19.45■□□□□ 0.7
PTCD3-203ENST00000409783 DENND2DQ9H6A0 471 aaPredicted RBP19.45■□□□□ 0.7
PTCD3-203ENST00000409783 UBTD1Q9HAC8 227 aa19.45■□□□□ 0.7
PTCD3-203ENST00000409783 SIAEQ9HAT2 523 aa19.45■□□□□ 0.7
PTCD3-203ENST00000409783 MGRN1O60291 552 aa19.44■□□□□ 0.7
PTCD3-203ENST00000409783 UBL3O95164 117 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms