RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 SNAP29O95721 258 aa12.66□□□□□ -0.38
CBX3-203ENST00000409747 F13BP05160 661 aa12.66□□□□□ -0.38
CBX3-203ENST00000409747 ARFIP2P53365 341 aa12.66□□□□□ -0.38
CBX3-203ENST00000409747 UGT2B15P54855 530 aa12.66□□□□□ -0.38
CBX3-203ENST00000409747 CDH15P55291 814 aa12.66□□□□□ -0.38
CBX3-203ENST00000409747 NKPD1Q17RQ9 610 aa12.66□□□□□ -0.38
CBX3-203ENST00000409747 RBM15BQ8NDT2 890 aaKnown RBP12.66□□□□□ -0.38
CBX3-203ENST00000409747 PFN4Q8NHR9 129 aa12.66□□□□□ -0.38
CBX3-203ENST00000409747 FGFBP3Q8TAT2 258 aa12.66□□□□□ -0.38
CBX3-203ENST00000409747 TMEM255BQ8WV15 326 aa12.66□□□□□ -0.38
CBX3-203ENST00000409747 LIPHQ8WWY8 451 aa12.66□□□□□ -0.38
CBX3-203ENST00000409747 SOX7Q9BT81 388 aa12.66□□□□□ -0.38
CBX3-203ENST00000409747 MRPL13Q9BYD1 178 aaKnown RBP12.66□□□□□ -0.38
CBX3-203ENST00000409747 KCNN2Q9H2S1 579 aa12.66□□□□□ -0.38
CBX3-203ENST00000409747 SMURF2Q9HAU4 748 aa12.66□□□□□ -0.38
CBX3-203ENST00000409747 FZR1Q9UM11 496 aa12.66□□□□□ -0.38
CBX3-203ENST00000409747 MED31Q9Y3C7 131 aa12.66□□□□□ -0.38
CBX3-203ENST00000409747 FAM220BPB1ANY3 271 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 ACADSP16219 412 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 IL2RGP31785 369 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 RAD52P43351 418 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 GPR6P46095 362 aaPredicted RBP12.65□□□□□ -0.38
CBX3-203ENST00000409747 KLF3P57682 345 aaPredicted RBP12.65□□□□□ -0.38
CBX3-203ENST00000409747 KLF10Q13118 480 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 MAD2L1BPQ15013 274 aaPredicted RBP12.65□□□□□ -0.38
CBX3-203ENST00000409747 TRIP10Q15642 601 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 ELFN2Q5R3F8 820 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 C10orf128Q5T292 105 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 LRP11Q86VZ4 500 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 NKAIN4Q8IVV8 208 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 SNX33Q8WV41 574 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 C1orf159Q96HA4 380 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 ZNF347Q96SE7 839 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 ZNF416Q9BWM5 594 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 BCL2L14Q9BZR8 327 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 SLCO1C1Q9NYB5 712 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 LYNX1G3V0Z9 82 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 TRMUO75648 421 aaKnown RBP12.65□□□□□ -0.38
CBX3-203ENST00000409747 FAM157BP0CG42 384 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 LYNX1P0DP58 116 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 TCN1P20061 433 aaPredicted RBP12.65□□□□□ -0.38
CBX3-203ENST00000409747 TNFRSF1BP20333 461 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 AQP2P41181 271 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 ZNF133P52736 654 aaPredicted RBP12.65□□□□□ -0.38
CBX3-203ENST00000409747 DVL1P1P54792 670 aaPredicted RBP12.65□□□□□ -0.38
CBX3-203ENST00000409747 HSF2Q03933 536 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 PIN1Q13526 163 aaPredicted RBP12.65□□□□□ -0.38
CBX3-203ENST00000409747 TAF11Q15544 211 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 MOGQ16653 247 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 PCGF3Q3KNV8 242 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 LRRC23Q53EV4 343 aaPredicted RBP12.65□□□□□ -0.38
CBX3-203ENST00000409747 CYBRD1Q53TN4 286 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 SYT14Q8NB59 555 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 ZNF519Q8TB69 540 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 SYNPRQ8TBG9 265 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 C10orf82Q8WW14 230 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 C11orf40Q8WZ69 217 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 ZNF583Q96ND8 569 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 SAR1AQ9NR31 198 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 C20orf141Q9NUB4 165 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 MYEF2Q9P2K5 600 aaKnown RBP12.65□□□□□ -0.38
CBX3-203ENST00000409747 TMEFF2Q9UIK5 374 aaPredicted RBP12.65□□□□□ -0.38
CBX3-203ENST00000409747 AP3M1Q9Y2T2 418 aa12.65□□□□□ -0.38
CBX3-203ENST00000409747 B4DSR2 109 aa12.64□□□□□ -0.39
CBX3-203ENST00000409747 TFP02787 698 aa12.64□□□□□ -0.39
CBX3-203ENST00000409747 HPXP02790 462 aa12.64□□□□□ -0.39
CBX3-203ENST00000409747 MT-ND5P03915 603 aa12.64□□□□□ -0.39
CBX3-203ENST00000409747 LCKP06239 509 aa12.64□□□□□ -0.39
CBX3-203ENST00000409747 TSPAN19P0C672 248 aa12.64□□□□□ -0.39
CBX3-203ENST00000409747 SAGP10523 405 aaPredicted RBP12.64□□□□□ -0.39
CBX3-203ENST00000409747 NAT2P11245 290 aa12.64□□□□□ -0.39
CBX3-203ENST00000409747 ZNF250P15622 560 aa12.64□□□□□ -0.39
CBX3-203ENST00000409747 APLNRP35414 380 aa12.64□□□□□ -0.39
CBX3-203ENST00000409747 SRP14P37108 136 aaKnown RBP12.64□□□□□ -0.39
CBX3-203ENST00000409747 OR1E2P47887 323 aa12.64□□□□□ -0.39
CBX3-203ENST00000409747 SEC24CP53992 1094 aa12.64□□□□□ -0.39
CBX3-203ENST00000409747 TMEM33P57088 247 aa12.64□□□□□ -0.39
CBX3-203ENST00000409747 MRPS34P82930 218 aaKnown RBP12.64□□□□□ -0.39
CBX3-203ENST00000409747 MYBPC1Q00872 1141 aa12.64□□□□□ -0.39
CBX3-203ENST00000409747 RUNX1T1Q06455 604 aa12.64□□□□□ -0.39
CBX3-203ENST00000409747 ST3GAL3Q11203 375 aa12.64□□□□□ -0.39
CBX3-203ENST00000409747 CCNIQ14094 377 aa12.64□□□□□ -0.39
CBX3-203ENST00000409747 KRTAP24-1Q3LI83 254 aa12.64□□□□□ -0.39
CBX3-203ENST00000409747 LIPNQ5VXI9 398 aa12.64□□□□□ -0.39
CBX3-203ENST00000409747 TMEM154Q6P9G4 183 aa12.64□□□□□ -0.39
CBX3-203ENST00000409747 UNQ6126/PRO20091Q6UXV3 157 aa12.64□□□□□ -0.39
CBX3-203ENST00000409747 OR2T12Q8NG77 320 aa12.64□□□□□ -0.39
CBX3-203ENST00000409747 FNDC8Q8TC99 324 aa12.64□□□□□ -0.39
CBX3-203ENST00000409747 LZICQ8WZA0 190 aa12.64□□□□□ -0.39
CBX3-203ENST00000409747 PRRC1Q96M27 445 aa12.64□□□□□ -0.39
CBX3-203ENST00000409747 SIAEQ9HAT2 523 aa12.64□□□□□ -0.39
CBX3-203ENST00000409747 CCNB1IP1Q9NPC3 277 aa12.64□□□□□ -0.39
CBX3-203ENST00000409747 FGFR1OP2Q9NVK5 253 aa12.64□□□□□ -0.39
CBX3-203ENST00000409747 TAAR3PQ9P1P4 343 aa12.64□□□□□ -0.39
CBX3-203ENST00000409747 IGLV3-9A0A075B6K5 115 aa12.63□□□□□ -0.39
CBX3-203ENST00000409747 SLC22A2O15244 555 aa12.63□□□□□ -0.39
CBX3-203ENST00000409747 SHOX2O60902 331 aaPredicted RBP12.63□□□□□ -0.39
CBX3-203ENST00000409747 CCL2P13500 99 aa12.63□□□□□ -0.39
CBX3-203ENST00000409747 KDELR2P33947 212 aa12.63□□□□□ -0.39
CBX3-203ENST00000409747 UCP2P55851 309 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms