RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 EML6Q6ZMW3 1958 aa18.56■□□□□ 0.56
USP39-203ENST00000409470 A0A087WV48 116 aa18.56■□□□□ 0.56
USP39-203ENST00000409470 A0A1B0GTH9 108 aa18.56■□□□□ 0.56
USP39-203ENST00000409470 A0A1W2PNV4 684 aa18.56■□□□□ 0.56
USP39-203ENST00000409470 HSPB2A8KAH6 182 aa18.56■□□□□ 0.56
USP39-203ENST00000409470 BOLA2-SMG1P6H3BVE0 249 aa18.56■□□□□ 0.56
USP39-203ENST00000409470 PAHP00439 452 aa18.56■□□□□ 0.56
USP39-203ENST00000409470 RAB40ALP0C0E4 278 aa18.56■□□□□ 0.56
USP39-203ENST00000409470 ICAM2P13598 275 aa18.56■□□□□ 0.56
USP39-203ENST00000409470 MAGEB1P43366 347 aa18.56■□□□□ 0.56
USP39-203ENST00000409470 FMODQ06828 376 aa18.56■□□□□ 0.56
USP39-203ENST00000409470 HSPB2Q16082 182 aa18.56■□□□□ 0.56
USP39-203ENST00000409470 DRAXINQ8NBI3 349 aaPredicted RBP18.56■□□□□ 0.56
USP39-203ENST00000409470 OR2G2Q8NGZ5 317 aa18.56■□□□□ 0.56
USP39-203ENST00000409470 PAQR8Q8TEZ7 354 aa18.56■□□□□ 0.56
USP39-203ENST00000409470 JSRP1Q96MG2 331 aaPredicted RBP18.56■□□□□ 0.56
USP39-203ENST00000409470 OR8B4Q96RC9 309 aa18.56■□□□□ 0.56
USP39-203ENST00000409470 KCNK17Q96T54 332 aa18.56■□□□□ 0.56
USP39-203ENST00000409470 COMMD4Q9H0A8 199 aa18.56■□□□□ 0.56
USP39-203ENST00000409470 ELOVL3Q9HB03 270 aa18.56■□□□□ 0.56
USP39-203ENST00000409470 A0A087WZY1 265 aa18.55■□□□□ 0.56
USP39-203ENST00000409470 G3V3Y1 287 aa18.55■□□□□ 0.56
USP39-203ENST00000409470 PIN1P1O15428 100 aa18.55■□□□□ 0.56
USP39-203ENST00000409470 EPXP11678 715 aa18.55■□□□□ 0.56
USP39-203ENST00000409470 BIDP55957 195 aa18.55■□□□□ 0.56
USP39-203ENST00000409470 RPS15P62841 145 aaKnown RBP18.55■□□□□ 0.56
USP39-203ENST00000409470 EIF2B1Q14232 305 aaKnown RBP18.55■□□□□ 0.56
USP39-203ENST00000409470 SSPNQ14714 243 aa18.55■□□□□ 0.56
USP39-203ENST00000409470 TMEM176BQ3YBM2 270 aaPredicted RBP18.55■□□□□ 0.56
USP39-203ENST00000409470 CEP78Q5JTW2 689 aa18.55■□□□□ 0.56
USP39-203ENST00000409470 TRIQKQ629K1 86 aa18.55■□□□□ 0.56
USP39-203ENST00000409470 NRARPQ7Z6K4 114 aa18.55■□□□□ 0.56
USP39-203ENST00000409470 ZNF676Q8N7Q3 588 aa18.55■□□□□ 0.56
USP39-203ENST00000409470 ORAI1Q96D31 301 aa18.55■□□□□ 0.56
USP39-203ENST00000409470 LIN37Q96GY3 246 aaPredicted RBP18.55■□□□□ 0.56
USP39-203ENST00000409470 DERL3Q96Q80 235 aa18.55■□□□□ 0.56
USP39-203ENST00000409470 MPZL1O95297 269 aa18.54■□□□□ 0.56
USP39-203ENST00000409470 EIF4EP06730 217 aaKnown RBP18.54■□□□□ 0.56
USP39-203ENST00000409470 ZNF823P16415 610 aa18.54■□□□□ 0.56
USP39-203ENST00000409470 FKBP2P26885 142 aaKnown RBP18.54■□□□□ 0.56
USP39-203ENST00000409470 DPP4P27487 766 aa18.54■□□□□ 0.56
USP39-203ENST00000409470 KCTD18Q6PI47 426 aaPredicted RBP18.54■□□□□ 0.56
USP39-203ENST00000409470 SPATC1Q76KD6 591 aa18.54■□□□□ 0.56
USP39-203ENST00000409470 WDFY1Q8IWB7 410 aa18.54■□□□□ 0.56
USP39-203ENST00000409470 UEVLDQ8IX04 471 aa18.54■□□□□ 0.56
USP39-203ENST00000409470 OR1J4Q8NGS1 313 aa18.54■□□□□ 0.56
USP39-203ENST00000409470 GNRHR2Q96P88 292 aa18.54■□□□□ 0.56
USP39-203ENST00000409470 UBL7Q96S82 380 aaPredicted RBP18.54■□□□□ 0.56
USP39-203ENST00000409470 EMC6Q9BV81 110 aa18.54■□□□□ 0.56
USP39-203ENST00000409470 EDEM2Q9BV94 578 aa18.54■□□□□ 0.56
USP39-203ENST00000409470 MFRPQ9BY79 579 aa18.54■□□□□ 0.56
USP39-203ENST00000409470 SLC25A18Q9H1K4 315 aa18.54■□□□□ 0.56
USP39-203ENST00000409470 FANCFQ9NPI8 374 aa18.54■□□□□ 0.56
USP39-203ENST00000409470 CYSLTR2Q9NS75 346 aa18.54■□□□□ 0.56
USP39-203ENST00000409470 C9orf172C9J069 976 aa18.54■□□□□ 0.56
USP39-203ENST00000409470 PDCD5O14737 125 aa18.54■□□□□ 0.56
USP39-203ENST00000409470 ATF1P18846 271 aa18.54■□□□□ 0.56
USP39-203ENST00000409470 MAPK3P27361 379 aaPredicted RBP18.54■□□□□ 0.56
USP39-203ENST00000409470 RASGEF1BQ0VAM2 473 aa18.54■□□□□ 0.56
USP39-203ENST00000409470 SLC17A1Q14916 467 aa18.54■□□□□ 0.56
USP39-203ENST00000409470 Q499Y3 187 aa18.54■□□□□ 0.56
USP39-203ENST00000409470 KRT77Q7Z794 578 aa18.54■□□□□ 0.56
USP39-203ENST00000409470 GPAT4Q86UL3 456 aa18.54■□□□□ 0.56
USP39-203ENST00000409470 ZNF679Q8IYX0 411 aa18.54■□□□□ 0.56
USP39-203ENST00000409470 ADPRHL1Q8NDY3 354 aa18.54■□□□□ 0.56
USP39-203ENST00000409470 C19orf18Q8NEA5 215 aa18.54■□□□□ 0.56
USP39-203ENST00000409470 SH2D2AQ9NP31 389 aa18.54■□□□□ 0.56
USP39-203ENST00000409470 BRD7Q9NPI1 651 aa18.54■□□□□ 0.56
USP39-203ENST00000409470 B3GAT1Q9P2W7 334 aa18.54■□□□□ 0.56
USP39-203ENST00000409470 HDGFL3Q9Y3E1 203 aa18.54■□□□□ 0.56
USP39-203ENST00000409470 TMEM212A6NML5 194 aa18.53■□□□□ 0.56
USP39-203ENST00000409470 OR4C45A6NMZ5 311 aa18.53■□□□□ 0.56
USP39-203ENST00000409470 SNPHO15079 494 aa18.53■□□□□ 0.56
USP39-203ENST00000409470 KHDRBS3O75525 346 aaKnown RBP18.53■□□□□ 0.56
USP39-203ENST00000409470 HPP00738 406 aa18.53■□□□□ 0.56
USP39-203ENST00000409470 NPR2P20594 1047 aa18.53■□□□□ 0.56
USP39-203ENST00000409470 SOX2P48431 317 aa18.53■□□□□ 0.56
USP39-203ENST00000409470 ASAH1Q13510 395 aa18.53■□□□□ 0.56
USP39-203ENST00000409470 RIN1Q13671 783 aa18.53■□□□□ 0.56
USP39-203ENST00000409470 GTPBP8Q8N3Z3 284 aaPredicted RBP18.53■□□□□ 0.56
USP39-203ENST00000409470 ZNF454Q8N9F8 522 aa18.53■□□□□ 0.56
USP39-203ENST00000409470 OR4M1Q8NGD0 313 aa18.53■□□□□ 0.56
USP39-203ENST00000409470 DCBLD2Q96PD2 775 aa18.53■□□□□ 0.56
USP39-203ENST00000409470 ABHD6Q9BV23 337 aa18.53■□□□□ 0.56
USP39-203ENST00000409470 ZCCHC4Q9H5U6 513 aa18.53■□□□□ 0.56
USP39-203ENST00000409470 PROK2Q9HC23 129 aa18.53■□□□□ 0.56
USP39-203ENST00000409470 TMEM9BQ9NQ34 198 aa18.53■□□□□ 0.56
USP39-203ENST00000409470 ABRACLQ9P1F3 81 aa18.53■□□□□ 0.56
USP39-203ENST00000409470 FZD7O75084 574 aa18.52■□□□□ 0.56
USP39-203ENST00000409470 ZNF432O94892 652 aa18.52■□□□□ 0.56
USP39-203ENST00000409470 ZNF806P0C7X5 589 aa18.52■□□□□ 0.56
USP39-203ENST00000409470 LIFP15018 202 aa18.52■□□□□ 0.56
USP39-203ENST00000409470 Q0VFX4 171 aa18.52■□□□□ 0.56
USP39-203ENST00000409470 ODF4Q2M2E3 257 aa18.52■□□□□ 0.56
USP39-203ENST00000409470 TMEM164Q5U3C3 297 aa18.52■□□□□ 0.56
USP39-203ENST00000409470 ZNF468Q5VIY5 522 aaPredicted RBP18.52■□□□□ 0.56
USP39-203ENST00000409470 CDCP2Q5VXM1 449 aa18.52■□□□□ 0.56
USP39-203ENST00000409470 TMEM225Q6GV28 225 aa18.52■□□□□ 0.56
USP39-203ENST00000409470 ARMC10Q8N2F6 343 aa18.52■□□□□ 0.56
USP39-203ENST00000409470 PRSS35Q8N3Z0 413 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms