RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 AP3M1Q9Y2T2 418 aa16.59■□□□□ 0.25
SMARCB1-204ENST00000407422 IGKV1D-43A0A0B4J1Z2 117 aa16.58■□□□□ 0.24
SMARCB1-204ENST00000407422 LYNX1G3V0Z9 82 aa16.58■□□□□ 0.24
SMARCB1-204ENST00000407422 SYNGR3O43761 229 aa16.58■□□□□ 0.24
SMARCB1-204ENST00000407422 ZNF682O95780 498 aa16.58■□□□□ 0.24
SMARCB1-204ENST00000407422 ERCC1P07992 297 aaPredicted RBP16.58■□□□□ 0.24
SMARCB1-204ENST00000407422 LYNX1P0DP58 116 aa16.58■□□□□ 0.24
SMARCB1-204ENST00000407422 APEHP13798 732 aaKnown RBP16.58■□□□□ 0.24
SMARCB1-204ENST00000407422 MAKP20794 623 aa16.58■□□□□ 0.24
SMARCB1-204ENST00000407422 CDAP32320 146 aa16.58■□□□□ 0.24
SMARCB1-204ENST00000407422 ALDH3B1P43353 468 aa16.58■□□□□ 0.24
SMARCB1-204ENST00000407422 ZNF84P51523 738 aa16.58■□□□□ 0.24
SMARCB1-204ENST00000407422 ZNF133P52736 654 aaPredicted RBP16.58■□□□□ 0.24
SMARCB1-204ENST00000407422 SEC24CP53992 1094 aa16.58■□□□□ 0.24
SMARCB1-204ENST00000407422 FMODQ06828 376 aa16.58■□□□□ 0.24
SMARCB1-204ENST00000407422 TOP3AQ13472 1001 aaPredicted RBP16.58■□□□□ 0.24
SMARCB1-204ENST00000407422 MAD2L1BPQ15013 274 aaPredicted RBP16.58■□□□□ 0.24
SMARCB1-204ENST00000407422 LRRC18Q8N456 261 aa16.58■□□□□ 0.24
SMARCB1-204ENST00000407422 ARIH2OSQ8N7S6 290 aa16.58■□□□□ 0.24
SMARCB1-204ENST00000407422 NMD3Q96D46 503 aaKnown RBP16.58■□□□□ 0.24
SMARCB1-204ENST00000407422 MSI2Q96DH6 328 aaKnown RBP16.58■□□□□ 0.24
SMARCB1-204ENST00000407422 REV1Q9UBZ9 1251 aa16.58■□□□□ 0.24
SMARCB1-204ENST00000407422 HIF3AQ9Y2N7 669 aa16.58■□□□□ 0.24
SMARCB1-204ENST00000407422 LRP5LA4QPB2 252 aa16.57■□□□□ 0.24
SMARCB1-204ENST00000407422 CENPBD1B2RD01 187 aa16.57■□□□□ 0.24
SMARCB1-204ENST00000407422 M0R233 179 aa16.57■□□□□ 0.24
SMARCB1-204ENST00000407422 ENTPD5O75356 428 aa16.57■□□□□ 0.24
SMARCB1-204ENST00000407422 IFNW1P05000 195 aa16.57■□□□□ 0.24
SMARCB1-204ENST00000407422 FAM157BP0CG42 384 aa16.57■□□□□ 0.24
SMARCB1-204ENST00000407422 TCN1P20061 433 aaPredicted RBP16.57■□□□□ 0.24
SMARCB1-204ENST00000407422 GIFP27352 417 aa16.57■□□□□ 0.24
SMARCB1-204ENST00000407422 GSK3BP49841 420 aa16.57■□□□□ 0.24
SMARCB1-204ENST00000407422 GZMKP49863 264 aa16.57■□□□□ 0.24
SMARCB1-204ENST00000407422 SLC36A2Q495M3 483 aa16.57■□□□□ 0.24
SMARCB1-204ENST00000407422 NRN1LQ496H8 165 aa16.57■□□□□ 0.24
SMARCB1-204ENST00000407422 ALG10Q5BKT4 473 aa16.57■□□□□ 0.24
SMARCB1-204ENST00000407422 C10orf128Q5T292 105 aa16.57■□□□□ 0.24
SMARCB1-204ENST00000407422 TMEM53Q6P2H8 277 aa16.57■□□□□ 0.24
SMARCB1-204ENST00000407422 HDDC2Q7Z4H3 204 aa16.57■□□□□ 0.24
SMARCB1-204ENST00000407422 IGFN1Q86VF2 1251 aa16.57■□□□□ 0.24
SMARCB1-204ENST00000407422 NRMQ8IXM6 262 aa16.57■□□□□ 0.24
SMARCB1-204ENST00000407422 ZNF786Q8N393 782 aa16.57■□□□□ 0.24
SMARCB1-204ENST00000407422 CLDN22Q8N7P3 220 aa16.57■□□□□ 0.24
SMARCB1-204ENST00000407422 ZNF540Q8NDQ6 660 aa16.57■□□□□ 0.24
SMARCB1-204ENST00000407422 UBASH3BQ8TF42 649 aa16.57■□□□□ 0.24
SMARCB1-204ENST00000407422 HOPXQ9BPY8 73 aaPredicted RBP16.57■□□□□ 0.24
SMARCB1-204ENST00000407422 SOX7Q9BT81 388 aa16.57■□□□□ 0.24
SMARCB1-204ENST00000407422 OR51B6Q9H340 312 aa16.57■□□□□ 0.24
SMARCB1-204ENST00000407422 TXNIPQ9H3M7 391 aa16.57■□□□□ 0.24
SMARCB1-204ENST00000407422 EFCAB1Q9HAE3 211 aa16.57■□□□□ 0.24
SMARCB1-204ENST00000407422 SLC7A8Q9UHI5 535 aa16.57■□□□□ 0.24
SMARCB1-204ENST00000407422 DUSP13Q9UII6 198 aa16.57■□□□□ 0.24
SMARCB1-204ENST00000407422 UGT2A1Q9Y4X1 527 aa16.57■□□□□ 0.24
SMARCB1-204ENST00000407422 GSTA4O15217 222 aa16.56■□□□□ 0.24
SMARCB1-204ENST00000407422 MMP7P09237 267 aaPredicted RBP16.56■□□□□ 0.24
SMARCB1-204ENST00000407422 ZNF23P17027 643 aa16.56■□□□□ 0.24
SMARCB1-204ENST00000407422 LSP1P33241 339 aa16.56■□□□□ 0.24
SMARCB1-204ENST00000407422 NUDT2P50583 147 aa16.56■□□□□ 0.24
SMARCB1-204ENST00000407422 CBLL1Q75N03 491 aa16.56■□□□□ 0.24
SMARCB1-204ENST00000407422 OFCC1Q8IZS5 231 aa16.56■□□□□ 0.24
SMARCB1-204ENST00000407422 NSMAFQ92636 917 aa16.56■□□□□ 0.24
SMARCB1-204ENST00000407422 FNDC11Q9BVV2 318 aa16.56■□□□□ 0.24
SMARCB1-204ENST00000407422 CDC42EP3Q9UKI2 254 aa16.56■□□□□ 0.24
SMARCB1-204ENST00000407422 STAB1Q9NY15 2570 aa16.56■□□□□ 0.24
SMARCB1-204ENST00000407422 TRAV27A0A087WT01 109 aa16.56■□□□□ 0.24
SMARCB1-204ENST00000407422 LOC100289279A0A1B0GTE1 492 aa16.56■□□□□ 0.24
SMARCB1-204ENST00000407422 NPIPB13A6NJU9 1138 aa16.56■□□□□ 0.24
SMARCB1-204ENST00000407422 NPIPB4C9JG80 1138 aa16.56■□□□□ 0.24
SMARCB1-204ENST00000407422 LMX1BO60663 402 aa16.56■□□□□ 0.24
SMARCB1-204ENST00000407422 SERPINA1P01009 418 aa16.56■□□□□ 0.24
SMARCB1-204ENST00000407422 SAGP10523 405 aaPredicted RBP16.56■□□□□ 0.24
SMARCB1-204ENST00000407422 IFNA8P32881 189 aa16.56■□□□□ 0.24
SMARCB1-204ENST00000407422 RPS23P62266 143 aaKnown RBP16.56■□□□□ 0.24
SMARCB1-204ENST00000407422 CD47Q08722 323 aa16.56■□□□□ 0.24
SMARCB1-204ENST00000407422 FHL1Q13642 323 aa16.56■□□□□ 0.24
SMARCB1-204ENST00000407422 DPPA2Q7Z7J5 298 aa16.56■□□□□ 0.24
SMARCB1-204ENST00000407422 LRRC75AQ8NAA5 344 aa16.56■□□□□ 0.24
SMARCB1-204ENST00000407422 RBM15BQ8NDT2 890 aaKnown RBP16.56■□□□□ 0.24
SMARCB1-204ENST00000407422 OR51A7Q8NH64 312 aa16.56■□□□□ 0.24
SMARCB1-204ENST00000407422 GEMIN6Q8WXD5 167 aaKnown RBP16.56■□□□□ 0.24
SMARCB1-204ENST00000407422 NABP1Q96AH0 204 aa16.56■□□□□ 0.24
SMARCB1-204ENST00000407422 HSH2DQ96JZ2 352 aa16.56■□□□□ 0.24
SMARCB1-204ENST00000407422 ELAC2Q9BQ52 826 aaKnown RBP16.56■□□□□ 0.24
SMARCB1-204ENST00000407422 CHODLQ9H9P2 273 aa16.56■□□□□ 0.24
SMARCB1-204ENST00000407422 TMEM160Q9NX00 188 aa16.56■□□□□ 0.24
SMARCB1-204ENST00000407422 ZNF346Q9UL40 294 aaKnown RBP16.56■□□□□ 0.24
SMARCB1-204ENST00000407422 LILRA1O75019 489 aa16.55■□□□□ 0.24
SMARCB1-204ENST00000407422 PRSS23O95084 383 aa16.55■□□□□ 0.24
SMARCB1-204ENST00000407422 NCK1P16333 377 aa16.55■□□□□ 0.24
SMARCB1-204ENST00000407422 IGFBP5P24593 272 aa16.55■□□□□ 0.24
SMARCB1-204ENST00000407422 IL2RGP31785 369 aa16.55■□□□□ 0.24
SMARCB1-204ENST00000407422 ERVS71-1P61550 626 aa16.55■□□□□ 0.24
SMARCB1-204ENST00000407422 MRPS34P82930 218 aaKnown RBP16.55■□□□□ 0.24
SMARCB1-204ENST00000407422 PRKCDQ05655 676 aa16.55■□□□□ 0.24
SMARCB1-204ENST00000407422 RIN1Q13671 783 aa16.55■□□□□ 0.24
SMARCB1-204ENST00000407422 TRAM2Q15035 370 aa16.55■□□□□ 0.24
SMARCB1-204ENST00000407422 IFI44LQ53G44 452 aa16.55■□□□□ 0.24
SMARCB1-204ENST00000407422 TBPL2Q6SJ96 375 aa16.55■□□□□ 0.24
SMARCB1-204ENST00000407422 FKBP9P1Q75LS8 142 aa16.55■□□□□ 0.24
SMARCB1-204ENST00000407422 TSEN54Q7Z6J9 526 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms