RNA–Protein interactions for RNA: ENST00000407144.6

CUEDC1-202, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUEDC1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-202ENST00000407144 FAHD2BQ6P2I3 314 aaPredicted RBP20.31■□□□□ 0.84
CUEDC1-202ENST00000407144 TMCO2Q7Z6W1 182 aaPredicted RBP20.31■□□□□ 0.84
CUEDC1-202ENST00000407144 ETFBKMTQ8IXQ9 262 aa20.31■□□□□ 0.84
CUEDC1-202ENST00000407144 WBP2Q969T9 261 aa20.31■□□□□ 0.84
CUEDC1-202ENST00000407144 FAHD2AQ96GK7 314 aa20.31■□□□□ 0.84
CUEDC1-202ENST00000407144 RBM18Q96H35 190 aaKnown RBP20.31■□□□□ 0.84
CUEDC1-202ENST00000407144 IP6K3Q96PC2 410 aa20.31■□□□□ 0.84
CUEDC1-202ENST00000407144 RGCCQ9H4X1 137 aa20.31■□□□□ 0.84
CUEDC1-202ENST00000407144 ZDHHC4Q9NPG8 344 aa20.31■□□□□ 0.84
CUEDC1-202ENST00000407144 CDV3Q9UKY7 258 aaKnown RBP20.31■□□□□ 0.84
CUEDC1-202ENST00000407144 DENND4CQ5VZ89 1909 aa20.31■□□□□ 0.84
CUEDC1-202ENST00000407144 TRBV5-5A0A0J9YX44 114 aa20.31■□□□□ 0.84
CUEDC1-202ENST00000407144 AK1P00568 194 aa20.31■□□□□ 0.84
CUEDC1-202ENST00000407144 IRF1P10914 325 aa20.31■□□□□ 0.84
CUEDC1-202ENST00000407144 RAB4AP20338 218 aa20.31■□□□□ 0.84
CUEDC1-202ENST00000407144 ZNF136P52737 540 aa20.31■□□□□ 0.84
CUEDC1-202ENST00000407144 CASP6P55212 293 aa20.31■□□□□ 0.84
CUEDC1-202ENST00000407144 CYCSP99999 105 aaKnown RBP20.31■□□□□ 0.84
CUEDC1-202ENST00000407144 CCINQ13939 588 aa20.31■□□□□ 0.84
CUEDC1-202ENST00000407144 MORN1Q5T089 497 aa20.31■□□□□ 0.84
CUEDC1-202ENST00000407144 RANBP3LQ86VV4 465 aaPredicted RBP20.31■□□□□ 0.84
CUEDC1-202ENST00000407144 TRAM1L1Q8N609 369 aa20.31■□□□□ 0.84
CUEDC1-202ENST00000407144 BPIFA2Q96DR5 249 aa20.31■□□□□ 0.84
CUEDC1-202ENST00000407144 RNF126Q9BV68 326 aa20.31■□□□□ 0.84
CUEDC1-202ENST00000407144 MRPL37Q9BZE1 423 aaKnown RBP20.31■□□□□ 0.84
CUEDC1-202ENST00000407144 MEIS3P1A6NDR6 274 aa20.3■□□□□ 0.84
CUEDC1-202ENST00000407144 LRG1P02750 347 aa20.3■□□□□ 0.84
CUEDC1-202ENST00000407144 CTSHP09668 335 aa20.3■□□□□ 0.84
CUEDC1-202ENST00000407144 RABIFP47224 123 aa20.3■□□□□ 0.84
CUEDC1-202ENST00000407144 SULT1A2P50226 295 aa20.3■□□□□ 0.84
CUEDC1-202ENST00000407144 NANOS3P60323 173 aaKnown RBP20.3■□□□□ 0.84
CUEDC1-202ENST00000407144 SNRPD1P62314 119 aaKnown RBP20.3■□□□□ 0.84
CUEDC1-202ENST00000407144 SRSF5Q13243 272 aaKnown RBP20.3■□□□□ 0.84
CUEDC1-202ENST00000407144 GRB14Q14449 540 aa20.3■□□□□ 0.84
CUEDC1-202ENST00000407144 PRRT3Q5FWE3 981 aa20.3■□□□□ 0.84
CUEDC1-202ENST00000407144 WDR88Q6ZMY6 472 aa20.3■□□□□ 0.84
CUEDC1-202ENST00000407144 UBAC2Q8NBM4 344 aa20.3■□□□□ 0.84
CUEDC1-202ENST00000407144 OR1J1Q8NGS3 322 aa20.3■□□□□ 0.84
CUEDC1-202ENST00000407144 OR13C8Q8NGS7 320 aa20.3■□□□□ 0.84
CUEDC1-202ENST00000407144 LYPD6BQ8NI32 183 aa20.3■□□□□ 0.84
CUEDC1-202ENST00000407144 ASB17Q8WXJ9 295 aa20.3■□□□□ 0.84
CUEDC1-202ENST00000407144 PMM1Q92871 262 aa20.3■□□□□ 0.84
CUEDC1-202ENST00000407144 SCAMP4Q969E2 229 aa20.3■□□□□ 0.84
CUEDC1-202ENST00000407144 ZNF689Q96CS4 500 aaPredicted RBP20.3■□□□□ 0.84
CUEDC1-202ENST00000407144 TCTN2Q96GX1 697 aa20.3■□□□□ 0.84
CUEDC1-202ENST00000407144 KLF16Q9BXK1 252 aaPredicted RBP20.3■□□□□ 0.84
CUEDC1-202ENST00000407144 SLC2A8Q9NY64 477 aa20.3■□□□□ 0.84
CUEDC1-202ENST00000407144 GDF2Q9UK05 429 aaPredicted RBP20.3■□□□□ 0.84
CUEDC1-202ENST00000407144 PADI3Q9ULW8 664 aa20.3■□□□□ 0.84
CUEDC1-202ENST00000407144 FLVCR1Q9Y5Y0 555 aa20.3■□□□□ 0.84
CUEDC1-202ENST00000407144 COL4A3Q01955 1670 aa20.3■□□□□ 0.84
CUEDC1-202ENST00000407144 RPL36A-HNRNPH2H7BZ11 118 aa20.29■□□□□ 0.84
CUEDC1-202ENST00000407144 CDC40O60508 579 aaKnown RBP eCLIP20.29■□□□□ 0.84
CUEDC1-202ENST00000407144 LYL1P12980 280 aa20.29■□□□□ 0.84
CUEDC1-202ENST00000407144 PTNP21246 168 aa20.29■□□□□ 0.84
CUEDC1-202ENST00000407144 SULT1A1P50225 295 aa20.29■□□□□ 0.84
CUEDC1-202ENST00000407144 CCL14Q16627 93 aa20.29■□□□□ 0.84
CUEDC1-202ENST00000407144 ZNF585AQ6P3V2 769 aa20.29■□□□□ 0.84
CUEDC1-202ENST00000407144 HEPN1Q6WQI6 88 aa20.29■□□□□ 0.84
CUEDC1-202ENST00000407144 ZNF280BQ86YH2 543 aa20.29■□□□□ 0.84
CUEDC1-202ENST00000407144 TGIF2LXQ8IUE1 241 aa20.29■□□□□ 0.84
CUEDC1-202ENST00000407144 YPEL4Q96NS1 127 aa20.29■□□□□ 0.84
CUEDC1-202ENST00000407144 SYT4Q9H2B2 425 aa20.29■□□□□ 0.84
CUEDC1-202ENST00000407144 LYPD3O95274 346 aa20.29■□□□□ 0.84
CUEDC1-202ENST00000407144 ZIC2O95409 532 aaPredicted RBP20.29■□□□□ 0.84
CUEDC1-202ENST00000407144 DCNP07585 359 aaKnown RBP20.29■□□□□ 0.84
CUEDC1-202ENST00000407144 ELNP15502 786 aa20.29■□□□□ 0.84
CUEDC1-202ENST00000407144 CD1CP29017 333 aa20.29■□□□□ 0.84
CUEDC1-202ENST00000407144 NAA10P41227 235 aaPredicted RBP20.29■□□□□ 0.84
CUEDC1-202ENST00000407144 CX3CR1P49238 355 aa20.29■□□□□ 0.84
CUEDC1-202ENST00000407144 NUTF2P61970 127 aaKnown RBP20.29■□□□□ 0.84
CUEDC1-202ENST00000407144 EIPR1Q53HC9 387 aa20.29■□□□□ 0.84
CUEDC1-202ENST00000407144 C19orf47Q8N9M1 422 aaKnown RBP20.29■□□□□ 0.84
CUEDC1-202ENST00000407144 LMNTD1Q8N9Z9 388 aa20.29■□□□□ 0.84
CUEDC1-202ENST00000407144 ZSCAN4Q8NAM6 433 aaPredicted RBP20.29■□□□□ 0.84
CUEDC1-202ENST00000407144 SECTM1Q8WVN6 248 aa20.29■□□□□ 0.84
CUEDC1-202ENST00000407144 SEH1LQ96EE3 360 aa20.29■□□□□ 0.84
CUEDC1-202ENST00000407144 GPR174Q9BXC1 333 aa20.29■□□□□ 0.84
CUEDC1-202ENST00000407144 BCO1Q9HAY6 547 aa20.29■□□□□ 0.84
CUEDC1-202ENST00000407144 SMAD9O15198 467 aaKnown RBP20.28■□□□□ 0.84
CUEDC1-202ENST00000407144 MED6O75586 246 aa20.28■□□□□ 0.84
CUEDC1-202ENST00000407144 F10P00742 488 aa20.28■□□□□ 0.84
CUEDC1-202ENST00000407144 PLGP00747 810 aaPredicted RBP20.28■□□□□ 0.84
CUEDC1-202ENST00000407144 F3P13726 295 aa20.28■□□□□ 0.84
CUEDC1-202ENST00000407144 SLC6A6P31641 620 aa20.28■□□□□ 0.84
CUEDC1-202ENST00000407144 CTNNB1P35222 781 aa20.28■□□□□ 0.84
CUEDC1-202ENST00000407144 EFNB2P52799 333 aa20.28■□□□□ 0.84
CUEDC1-202ENST00000407144 RSU1Q15404 277 aa20.28■□□□□ 0.84
CUEDC1-202ENST00000407144 ZNF658BQ4V348 819 aaPredicted RBP20.28■□□□□ 0.84
CUEDC1-202ENST00000407144 ZNF574Q6ZN55 896 aaPredicted RBP20.28■□□□□ 0.84
CUEDC1-202ENST00000407144 ZDHHC22Q8N966 263 aa20.28■□□□□ 0.84
CUEDC1-202ENST00000407144 ZNF417Q8TAU3 575 aa20.28■□□□□ 0.84
CUEDC1-202ENST00000407144 RAB24Q969Q5 203 aa20.28■□□□□ 0.84
CUEDC1-202ENST00000407144 RNF166Q96A37 237 aaPredicted RBP20.28■□□□□ 0.84
CUEDC1-202ENST00000407144 RRNAD1Q96FB5 475 aaKnown RBP20.28■□□□□ 0.84
CUEDC1-202ENST00000407144 MTHFD2LQ9H903 347 aaPredicted RBP20.28■□□□□ 0.84
CUEDC1-202ENST00000407144 PELI2Q9HAT8 420 aa20.28■□□□□ 0.84
CUEDC1-202ENST00000407144 KCNG2Q9UJ96 466 aa20.28■□□□□ 0.84
CUEDC1-202ENST00000407144 TMED3Q9Y3Q3 217 aa20.28■□□□□ 0.84
CUEDC1-202ENST00000407144 C5AR1P21730 350 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms