RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 ARFGEF1Q9Y6D6 1849 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 LGALS8O00214 317 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 CSNK1EP49674 416 aaKnown RBP11.12□□□□□ -0.63
SMCR8-201ENST00000406438 PHLDA2Q53GA4 152 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 WDR88Q6ZMY6 472 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 A4GALTQ9NPC4 353 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 TMED7-TICAM2A0A0A6YYA0 188 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 AQP7O14520 342 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 DOK2O60496 412 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 FURINP09958 794 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 CNR1P21554 472 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 BTN1A1Q13410 526 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 ZNF468Q5VIY5 522 aaPredicted RBP11.12□□□□□ -0.63
SMCR8-201ENST00000406438 NXNL2Q5VZ03 156 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 NEURL3Q96EH8 262 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 TMED7Q9Y3B3 224 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 NUPL2O15504 423 aaKnown RBP11.12□□□□□ -0.63
SMCR8-201ENST00000406438 DTYMKP23919 212 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 ALKBH1Q13686 389 aaKnown RBP11.12□□□□□ -0.63
SMCR8-201ENST00000406438 HENMT1Q5T8I9 393 aaKnown RBP11.12□□□□□ -0.63
SMCR8-201ENST00000406438 SFXN4Q6P4A7 337 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 CDC20BQ86Y33 519 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 METTL4Q8N3J2 472 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 NDFIP1Q9BT67 221 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 C20orf85Q9H1P6 137 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 CLDN24A6NM45 220 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 MT-ATP6P00846 226 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 MAKP20794 623 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 SEMA3BQ13214 749 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 LEXMQ3ZCV2 418 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 PHYHD1Q5SRE7 291 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 ZNF626Q68DY1 528 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 TAS1R1Q7RTX1 841 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 NAXDQ8IW45 347 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 OR6V1Q8N148 313 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 PRSS35Q8N3Z0 413 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 GON7Q9BXV9 100 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 TMEM31Q5JXX7 168 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 MKRN2Q9H000 416 aaKnown RBP11.11□□□□□ -0.63
SMCR8-201ENST00000406438 MTCH1Q9NZJ7 389 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 HCFC2Q9Y5Z7 792 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 H3BNC9 293 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 H7C1C5 153 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 GLCEO94923 617 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 ALPLP05186 524 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 CT45A10P0DMU9 189 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 WNT7BP56706 349 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 LCN6P62502 163 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 MEP1BQ16820 701 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.11□□□□□ -0.63
SMCR8-201ENST00000406438 ARHGAP11BQ3KRB8 267 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 STEAP1BQ6NZ63 245 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 LAX1Q8IWV1 398 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 SLC7A5P1Q8MH63 180 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 GOT1L1Q8NHS2 421 aaPredicted RBP11.11□□□□□ -0.63
SMCR8-201ENST00000406438 SLC25A21Q9BQT8 299 aaPredicted RBP11.11□□□□□ -0.63
SMCR8-201ENST00000406438 SOX7Q9BT81 388 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 THBS1P07996 1170 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 Q499Y3 187 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 ZNF836Q6ZNA1 936 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 CTRCQ99895 268 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 ZPBPQ9BS86 351 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 NMES1Q9C002 83 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 OBP2AQ9NY56 170 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 SLC2A8Q9NY64 477 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 NPFFR2Q9Y5X5 522 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 PRAMEF25A6NGN4 478 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 GLAP06280 429 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 GJA4P35212 333 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 RPL13AP40429 203 aaKnown RBP11.11□□□□□ -0.63
SMCR8-201ENST00000406438 C18orf63Q68DL7 685 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 ABHD4Q8TB40 342 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 A0A1B0GX78 115 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 ADAM10O14672 748 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 GJB3O75712 270 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 F10P00742 488 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 RELAQ04206 551 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 FGGYQ96C11 551 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 HS3ST2Q9Y278 367 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 RREB1Q92766 1687 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 DNAJC25-GNG10A0A024R161 153 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 ZFP92A6NM28 416 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 TPOP07202 933 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 RPS23P62266 143 aaKnown RBP11.11□□□□□ -0.63
SMCR8-201ENST00000406438 SLC35D3Q5M8T2 416 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 PXT1Q8NFP0 134 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 TMIGD2Q96BF3 282 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 APH1AQ96BI3 265 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 SLC29A1Q99808 456 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 LANCL2Q9NS86 450 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 CEPT1Q9Y6K0 416 aa11.11□□□□□ -0.63
SMCR8-201ENST00000406438 A0A1B0GTW7 788 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 GFRA2O00451 464 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 EFSO43281 561 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 TACR1P25103 407 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 MLF2Q15773 248 aaPredicted RBP11.1□□□□□ -0.63
SMCR8-201ENST00000406438 YOD1Q5VVQ6 348 aaPredicted RBP11.1□□□□□ -0.63
SMCR8-201ENST00000406438 LINC00346Q8IVM7 164 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 OR52I1Q8NGK6 324 aa11.1□□□□□ -0.63
SMCR8-201ENST00000406438 FBXO27Q8NI29 283 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms