RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 ZNF836Q6ZNA1 936 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 CCDC121Q6ZUS5 278 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 SLC26A11Q86WA9 606 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 CDKL3Q8IVW4 592 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 ST13P4Q8IZP2 240 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 ACOT4Q8N9L9 421 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 FBXL13Q8NEE6 735 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 BBS1Q8NFJ9 593 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 OR4A4PQ8NGN8 299 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 OR1S2Q8NGQ3 325 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 FGF14Q92915 247 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 STMN2Q93045 179 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 C8orf44Q96CB5 159 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 CHMP6Q96FZ7 201 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 SORT1Q99523 831 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 HIST1H4GQ99525 98 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 TMEM59Q9BXS4 323 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 DRC3Q9H069 523 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 LYRM4Q9HD34 91 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 B4GALT7Q9UBV7 327 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 UGT2A1Q9Y4X1 527 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 CACNG2Q9Y698 323 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 CPDO75976 1380 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 IGHV3OR16-13A0A075B7E8 117 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 TRBV9A0A0B4J1U6 114 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 ERICH2A1L162 156 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 GOLGA6L10A6NI86 522 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 SOX15O60248 233 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 TBL1XO60907 577 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 SRSF10O75494 262 aaKnown RBP3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 SERF1AO75920 110 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 TGM6O95932 706 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 IFNA14P01570 189 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 ANXA5P08758 320 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 GIG44P09565 113 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 CALM1P0DP23 149 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 CALM2P0DP24 149 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 CALM3P0DP25 149 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 CMA1P23946 247 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 CXCR2P25025 360 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 IRF8Q02556 426 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 CDC20Q12834 499 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 SELENBP1Q13228 472 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 HIKESHIQ53FT3 197 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 MARCH8Q5T0T0 291 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 ATAD3CQ5T2N8 411 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 TIGD3Q6B0B8 471 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 PTRHD1Q6GMV3 140 aaKnown RBP3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 C22orf42Q6IC83 251 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 MOB1BQ7L9L4 216 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 SLC16A14Q7RTX9 510 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 PLA2G4DQ86XP0 818 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 ZNF677Q86XU0 584 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 APOBEC3FQ8IUX4 373 aaKnown RBP3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 MICU2Q8IYU8 434 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 ASCC1Q8N9N2 400 aaKnown RBP3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 SNX31Q8N9S9 440 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 FNDC5Q8NAU1 212 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 OR10G3Q8NGC4 313 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 OR8J2Q8NGG1 315 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 OR8K1Q8NGG5 319 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 TEX47Q8TBZ9 253 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 LKAAEAR1Q8TD35 194 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 TNFRSF14Q92956 283 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 RAD51AP1Q96B01 352 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 FAM122AQ96E09 287 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 ZBED3Q96IU2 234 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 PRRC1Q96M27 445 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 TEKT3Q9BXF9 490 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 ACTR6Q9GZN1 396 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 TDRD3Q9H7E2 651 aaKnown RBP3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 FGF20Q9NP95 211 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 RPS10P5Q9NQ39 176 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 C12orf4Q9NQ89 552 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 INIPQ9NRY2 104 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 RHBDL2Q9NX52 303 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 PTTG3PQ9NZH4 202 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 CTSFQ9UBX1 484 aa3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 RAI1Q7Z5J4 1906 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P13-201ENST00000406019 A6NIZ1 184 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 SIRPB1O00241 398 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 MYO1DO94832 1006 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 CDK14O94921 469 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 LCA5LO95447 670 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 APOEP02649 317 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 GTF2E2P29084 291 aaKnown RBP3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 UQCRFS1P47985 274 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 NPBWR2P48146 333 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 TMED10P49755 219 aaKnown RBP3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 STX17P56962 302 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 RIPPLY3P57055 190 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 RAP1BP61224 184 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 ERVK-25P63136 954 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 SPCS2Q15005 226 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 ZNF239Q16600 458 aaKnown RBP3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 GSG1Q2KHT4 349 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 CCDC153Q494R4 210 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 NKAIN1Q4KMZ8 207 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 TMEM31Q5JXX7 168 aa3.62□□□□□ -1.83
HMGB1P13-201ENST00000406019 CDKL4Q5MAI5 379 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms