RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 EIF1AXP47813 144 aaKnown RBP18.72■□□□□ 0.59
TPM1-208ENST00000404484 GLO1Q04760 184 aa18.72■□□□□ 0.59
TPM1-208ENST00000404484 ERI1Q8IV48 349 aaKnown RBP18.72■□□□□ 0.59
TPM1-208ENST00000404484 UBQLNLQ8IYU4 475 aa18.72■□□□□ 0.59
TPM1-208ENST00000404484 OR10D3Q8NH80 312 aa18.72■□□□□ 0.59
TPM1-208ENST00000404484 UFD1Q92890 307 aa18.72■□□□□ 0.59
TPM1-208ENST00000404484 YIPF3Q9GZM5 350 aa18.72■□□□□ 0.59
TPM1-208ENST00000404484 MARCH7Q9H992 704 aa18.72■□□□□ 0.59
TPM1-208ENST00000404484 PAQR5Q9NXK6 330 aaPredicted RBP18.72■□□□□ 0.59
TPM1-208ENST00000404484 KLHL13Q9P2N7 655 aa18.72■□□□□ 0.59
TPM1-208ENST00000404484 CSAG2Q9Y5P2 127 aa18.72■□□□□ 0.59
TPM1-208ENST00000404484 TMEM14AQ9Y6G1 99 aa18.72■□□□□ 0.59
TPM1-208ENST00000404484 IGLV1-36A0A0B4J1U3 117 aa18.71■□□□□ 0.59
TPM1-208ENST00000404484 A0A1W2PQL4 384 aaPredicted RBP18.71■□□□□ 0.59
TPM1-208ENST00000404484 FAM171A2A8MVW0 826 aa18.71■□□□□ 0.59
TPM1-208ENST00000404484 ZNF670-ZNF695F2Z2N8 137 aa18.71■□□□□ 0.59
TPM1-208ENST00000404484 SELENOFO60613 162 aa18.71■□□□□ 0.59
TPM1-208ENST00000404484 TFP02787 698 aa18.71■□□□□ 0.59
TPM1-208ENST00000404484 STARP49675 285 aa18.71■□□□□ 0.59
TPM1-208ENST00000404484 CLRN1P58418 232 aa18.71■□□□□ 0.59
TPM1-208ENST00000404484 TAS2R43P59537 309 aa18.71■□□□□ 0.59
TPM1-208ENST00000404484 RPS3AP61247 264 aaKnown RBP18.71■□□□□ 0.59
TPM1-208ENST00000404484 TLE1Q04724 770 aa18.71■□□□□ 0.59
TPM1-208ENST00000404484 RUNX1T1Q06455 604 aa18.71■□□□□ 0.59
TPM1-208ENST00000404484 DBPQ10586 325 aaPredicted RBP18.71■□□□□ 0.59
TPM1-208ENST00000404484 TPBGQ13641 420 aa18.71■□□□□ 0.59
TPM1-208ENST00000404484 CTF1Q16619 201 aa18.71■□□□□ 0.59
TPM1-208ENST00000404484 PLEKHN1Q494U1 663 aaPredicted RBP18.71■□□□□ 0.59
TPM1-208ENST00000404484 THEM4Q5T1C6 240 aa18.71■□□□□ 0.59
TPM1-208ENST00000404484 EGFL6Q8IUX8 553 aa18.71■□□□□ 0.59
TPM1-208ENST00000404484 TIGD4Q8IY51 512 aa18.71■□□□□ 0.59
TPM1-208ENST00000404484 Q8NA96 180 aa18.71■□□□□ 0.59
TPM1-208ENST00000404484 NOXO1Q8NFA2 376 aa18.71■□□□□ 0.59
TPM1-208ENST00000404484 SPRYD4Q8WW59 207 aaPredicted RBP18.71■□□□□ 0.59
TPM1-208ENST00000404484 INTS14Q96SY0 518 aa18.71■□□□□ 0.59
TPM1-208ENST00000404484 SRXN1Q9BYN0 137 aa18.71■□□□□ 0.59
TPM1-208ENST00000404484 SLC6A15Q9H2J7 730 aa18.71■□□□□ 0.59
TPM1-208ENST00000404484 TRIM36Q9NQ86 728 aa18.71■□□□□ 0.59
TPM1-208ENST00000404484 NDUFB11Q9NX14 153 aa18.71■□□□□ 0.59
TPM1-208ENST00000404484 LUZP4Q9P127 313 aa18.71■□□□□ 0.59
TPM1-208ENST00000404484 MED12Q93074 2177 aa18.7■□□□□ 0.58
TPM1-208ENST00000404484 TRIM64BA6NI03 449 aa18.7■□□□□ 0.58
TPM1-208ENST00000404484 PYCARD-AS1I3L0S3 204 aa18.7■□□□□ 0.58
TPM1-208ENST00000404484 PHYHO14832 338 aa18.7■□□□□ 0.58
TPM1-208ENST00000404484 AIREO43918 545 aa18.7■□□□□ 0.58
TPM1-208ENST00000404484 CXCL13O43927 109 aa18.7■□□□□ 0.58
TPM1-208ENST00000404484 KHDRBS3O75525 346 aaKnown RBP18.7■□□□□ 0.58
TPM1-208ENST00000404484 CELA3AP09093 270 aa18.7■□□□□ 0.58
TPM1-208ENST00000404484 CTLA4P16410 223 aa18.7■□□□□ 0.58
TPM1-208ENST00000404484 LHX2P50458 406 aa18.7■□□□□ 0.58
TPM1-208ENST00000404484 ZNF85Q03923 595 aa18.7■□□□□ 0.58
TPM1-208ENST00000404484 SYS1Q8N2H4 156 aa18.7■□□□□ 0.58
TPM1-208ENST00000404484 ZNF511Q8NB15 262 aa18.7■□□□□ 0.58
TPM1-208ENST00000404484 SYT14Q8NB59 555 aa18.7■□□□□ 0.58
TPM1-208ENST00000404484 OR9K2Q8NGE7 335 aa18.7■□□□□ 0.58
TPM1-208ENST00000404484 ABTB1Q969K4 478 aaPredicted RBP18.7■□□□□ 0.58
TPM1-208ENST00000404484 MRPL13Q9BYD1 178 aaKnown RBP18.7■□□□□ 0.58
TPM1-208ENST00000404484 ZDHHC11Q9H8X9 412 aa18.7■□□□□ 0.58
TPM1-208ENST00000404484 B3GNT3Q9Y2A9 372 aa18.7■□□□□ 0.58
TPM1-208ENST00000404484 GCN1Q92616 2671 aaKnown RBP18.7■□□□□ 0.58
TPM1-208ENST00000404484 SLC35F4A4IF30 521 aa18.69■□□□□ 0.58
TPM1-208ENST00000404484 SMAD9O15198 467 aaKnown RBP18.69■□□□□ 0.58
TPM1-208ENST00000404484 RAMP1O60894 148 aa18.69■□□□□ 0.58
TPM1-208ENST00000404484 HLA-DQA2P01906 255 aa18.69■□□□□ 0.58
TPM1-208ENST00000404484 GADD45AP24522 165 aa18.69■□□□□ 0.58
TPM1-208ENST00000404484 PSMA1P25786 263 aaKnown RBP18.69■□□□□ 0.58
TPM1-208ENST00000404484 SUCLG1P53597 346 aaKnown RBP18.69■□□□□ 0.58
TPM1-208ENST00000404484 SLC17A1Q14916 467 aa18.69■□□□□ 0.58
TPM1-208ENST00000404484 SSX1Q16384 188 aa18.69■□□□□ 0.58
TPM1-208ENST00000404484 CREB3L2Q70SY1 520 aa18.69■□□□□ 0.58
TPM1-208ENST00000404484 SNX33Q8WV41 574 aa18.69■□□□□ 0.58
TPM1-208ENST00000404484 PNPLA2Q96AD5 504 aa18.69■□□□□ 0.58
TPM1-208ENST00000404484 UCN2Q96RP3 112 aa18.69■□□□□ 0.58
TPM1-208ENST00000404484 EMC6Q9BV81 110 aa18.69■□□□□ 0.58
TPM1-208ENST00000404484 WDR76Q9H967 626 aa18.69■□□□□ 0.58
TPM1-208ENST00000404484 BABAM2Q9NXR7 383 aa18.69■□□□□ 0.58
TPM1-208ENST00000404484 IGHV3-15A0A0B4J1V0 119 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 H0YC42 278 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 ATE1O95260 518 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 PGA4P0DJD7 388 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 PGA3P0DJD8 388 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 ZNF708P17019 499 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 CD79BP40259 229 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 GDPGP1Q6ZNW5 385 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 Q6ZS92 163 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 TRILQ7L0X0 811 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 ATCAYQ86WG3 371 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 PHC2Q8IXK0 858 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 NEIL3Q8TAT5 605 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 TSC22D3Q99576 134 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 LDAHQ9H6V9 325 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 KIAA1549Q9HCM3 1950 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 RELNP78509 3460 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 TRGV5A0A0B4J1U4 118 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 TTLL8A6PVC2 850 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 J3QKU1 62 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 TFECO14948 347 aaPredicted RBP18.68■□□□□ 0.58
TPM1-208ENST00000404484 ZNF24P17028 368 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 KLK2P20151 261 aa18.68■□□□□ 0.58
TPM1-208ENST00000404484 CLDN15P56746 228 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms