RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 TIGD4Q8IY51 512 aa10.61□□□□□ -0.71
COL25A1-202ENST00000399127 YIPF7Q8N8F6 280 aa10.61□□□□□ -0.71
COL25A1-202ENST00000399127 OR2T4Q8NH00 348 aa10.61□□□□□ -0.71
COL25A1-202ENST00000399127 ZNF417Q8TAU3 575 aa10.61□□□□□ -0.71
COL25A1-202ENST00000399127 KIAA1143Q96AT1 154 aaPredicted RBP10.61□□□□□ -0.71
COL25A1-202ENST00000399127 ZNF587Q96SQ5 575 aaPredicted RBP10.61□□□□□ -0.71
COL25A1-202ENST00000399127 IFT46Q9NQC8 304 aa10.61□□□□□ -0.71
COL25A1-202ENST00000399127 MRM2Q9UI43 246 aaKnown RBP10.61□□□□□ -0.71
COL25A1-202ENST00000399127 LAMP5Q9UJQ1 280 aa10.61□□□□□ -0.71
COL25A1-202ENST00000399127 KLF2Q9Y5W3 355 aaPredicted RBP10.61□□□□□ -0.71
COL25A1-202ENST00000399127 AUP1Q9Y679 476 aa10.61□□□□□ -0.71
COL25A1-202ENST00000399127 GPR179Q6PRD1 2367 aa10.61□□□□□ -0.71
COL25A1-202ENST00000399127 A8MVM7 634 aa10.61□□□□□ -0.71
COL25A1-202ENST00000399127 SLC19A2O60779 497 aa10.61□□□□□ -0.71
COL25A1-202ENST00000399127 TXNDC12O95881 172 aa10.61□□□□□ -0.71
COL25A1-202ENST00000399127 RENP00797 406 aa10.61□□□□□ -0.71
COL25A1-202ENST00000399127 HLA-DOBP13765 273 aa10.61□□□□□ -0.71
COL25A1-202ENST00000399127 ZNF28P17035 718 aa10.61□□□□□ -0.71
COL25A1-202ENST00000399127 ATF1P18846 271 aa10.61□□□□□ -0.71
COL25A1-202ENST00000399127 KIR2DL3P43628 341 aa10.61□□□□□ -0.71
COL25A1-202ENST00000399127 BTN1A1Q13410 526 aa10.61□□□□□ -0.71
COL25A1-202ENST00000399127 SQSTM1Q13501 440 aa10.61□□□□□ -0.71
COL25A1-202ENST00000399127 ZNF528Q3MIS6 628 aa10.61□□□□□ -0.71
COL25A1-202ENST00000399127 LIPNQ5VXI9 398 aa10.61□□□□□ -0.71
COL25A1-202ENST00000399127 ZNF385CQ66K41 422 aaPredicted RBP10.61□□□□□ -0.71
COL25A1-202ENST00000399127 ESPNLQ6ZVH7 1005 aa10.61□□□□□ -0.71
COL25A1-202ENST00000399127 THEM6Q8WUY1 208 aa10.61□□□□□ -0.71
COL25A1-202ENST00000399127 ACOT12Q8WYK0 555 aa10.61□□□□□ -0.71
COL25A1-202ENST00000399127 AKAP1Q92667 903 aaKnown RBP eCLIP10.61□□□□□ -0.71
COL25A1-202ENST00000399127 RNF166Q96A37 237 aaPredicted RBP10.61□□□□□ -0.71
COL25A1-202ENST00000399127 ARL5BQ96KC2 179 aa10.61□□□□□ -0.71
COL25A1-202ENST00000399127 GFM1Q96RP9 751 aaKnown RBP10.61□□□□□ -0.71
COL25A1-202ENST00000399127 AMELYQ99218 206 aa10.61□□□□□ -0.71
COL25A1-202ENST00000399127 NOX4Q9NPH5 578 aa10.61□□□□□ -0.71
COL25A1-202ENST00000399127 KLRF1Q9NZS2 232 aa10.61□□□□□ -0.71
COL25A1-202ENST00000399127 ADAM30Q9UKF2 790 aa10.61□□□□□ -0.71
COL25A1-202ENST00000399127 FLRT2O43155 660 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 NPIPB7O75200 414 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 OR2J2O76002 312 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 SERPINA3P01011 423 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 OPN1LWP04000 364 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 CAPZA2P47755 286 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 ARHGDIBP52566 201 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 SLC26A5P58743 744 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 INPP5JQ15735 1006 aaPredicted RBP10.6□□□□□ -0.71
COL25A1-202ENST00000399127 ETFDHQ16134 617 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 KIF26BQ2KJY2 2108 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 HSD17B12Q53GQ0 312 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 RNASE12Q5GAN4 147 aaKnown RBP10.6□□□□□ -0.71
COL25A1-202ENST00000399127 ZNF684Q5T5D7 378 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 ZBTB37Q5TC79 503 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 SLC35D2Q76EJ3 337 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 CPEB2Q7Z5Q1 589 aaKnown RBP10.6□□□□□ -0.71
COL25A1-202ENST00000399127 TPRA1Q86W33 373 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 LIX1LQ8IVB5 337 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 RGP1Q92546 391 aaPredicted RBP10.6□□□□□ -0.71
COL25A1-202ENST00000399127 C12orf57Q99622 126 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 SLC39A1Q9NY26 324 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 SLC23A1Q9UHI7 598 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 MOKQ9UQ07 419 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 H3BML4 177 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 PIN1P1O15428 100 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 LANCL1O43813 399 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 OR6A2O95222 327 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 AHSA1O95433 338 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 SOX2P48431 317 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 INPP1P49441 399 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 GZMKP49863 264 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 TNK1Q13470 666 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 SGCBQ16585 318 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 EMC4Q5J8M3 183 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 EEF1A1P5Q5VTE0 462 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 METTL11BQ5VVY1 283 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 ZNF57Q68EA5 555 aaPredicted RBP10.6□□□□□ -0.71
COL25A1-202ENST00000399127 GPR139Q6DWJ6 353 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 ASB18Q6ZVZ8 466 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 FAM220AQ7Z4H9 259 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 LRRC28Q86X40 367 aaPredicted RBP10.6□□□□□ -0.71
COL25A1-202ENST00000399127 CDH26Q8IXH8 852 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 ZNF433Q8N7K0 673 aaPredicted RBP10.6□□□□□ -0.71
COL25A1-202ENST00000399127 ENKURQ8TC29 256 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 DERL3Q96Q80 235 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 HDHD2Q9H0R4 259 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 CYSLTR2Q9NS75 346 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 KCNG2Q9UJ96 466 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 EXPH5Q8NEV8 1989 aa10.6□□□□□ -0.71
COL25A1-202ENST00000399127 FREM3P0C091 2139 aa10.59□□□□□ -0.71
COL25A1-202ENST00000399127 SLC16A7O60669 478 aa10.59□□□□□ -0.71
COL25A1-202ENST00000399127 ARL6IP5O75915 188 aa10.59□□□□□ -0.71
COL25A1-202ENST00000399127 UCHL1P09936 223 aa10.59□□□□□ -0.71
COL25A1-202ENST00000399127 TFPIP10646 304 aa10.59□□□□□ -0.71
COL25A1-202ENST00000399127 EPXP11678 715 aa10.59□□□□□ -0.71
COL25A1-202ENST00000399127 CCL4P13236 92 aa10.59□□□□□ -0.71
COL25A1-202ENST00000399127 DUSP3P51452 185 aaPredicted RBP10.59□□□□□ -0.71
COL25A1-202ENST00000399127 MEP1BQ16820 701 aa10.59□□□□□ -0.71
COL25A1-202ENST00000399127 METAP1DQ6UB28 335 aaPredicted RBP10.59□□□□□ -0.71
COL25A1-202ENST00000399127 CDC20BQ86Y33 519 aa10.59□□□□□ -0.71
COL25A1-202ENST00000399127 RDH10Q8IZV5 341 aa10.59□□□□□ -0.71
COL25A1-202ENST00000399127 OR10G3Q8NGC4 313 aa10.59□□□□□ -0.71
COL25A1-202ENST00000399127 RHBDD1Q8TEB9 315 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms