RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 CLUP10909 449 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 POU3F2P20265 443 aaPredicted RBP13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 OR7E24Q6IFN5 339 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 SLC16A9Q7RTY1 509 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 OR2W3Q7Z3T1 314 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 BAP18Q8IXM2 172 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 AMER3Q8N944 861 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 OR2A1Q8NGT9 310 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 FNDC9Q8TBE3 224 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 TOMM40LQ969M1 308 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 ADOQ96SZ5 270 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 ANKRD19PQ9H560 264 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 SMCO3A2RU48 225 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 IFNA2P01563 188 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 KCNJ3P48549 501 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 MECP2P51608 486 aaKnown RBP13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 PRPS1P60891 318 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 PLA2G7Q13093 441 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 DPY19L4Q7Z388 723 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 TRAPPC6BQ86SZ2 158 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 ZNF561Q8N587 486 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 SFT2D1Q8WV19 159 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 OR1F2PQ96R84 312 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 ELOVL3Q9HB03 270 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 CSAG2Q9Y5P2 127 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 WIF1Q9Y5W5 379 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 CACNA1IQ9P0X4 2223 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 OR5K3A6NET4 321 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 EFCAB7A8K855 629 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 KDM4EB2RXH2 506 aaPredicted RBP13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 H7C1C5 153 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 AQP8O94778 261 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 F13BP05160 661 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 NMBP08949 121 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 OR4E1P0C645 316 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 DRD1P21728 446 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 UBE2KP61086 200 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 LCN6P62502 163 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 FABP9Q0Z7S8 132 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 DUSP5Q16690 384 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 MANEAQ5SRI9 462 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 MFSD12Q6NUT3 480 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 SLC35D2Q76EJ3 337 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 PLPP7Q8NBV4 271 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 CCDC86Q9H6F5 360 aaKnown RBP13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 FN3KRPQ9HA64 309 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 CMC2Q9NRP2 79 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 SERGEFQ9UGK8 458 aa13.38□□□□□ -0.27
RPRD1A-202ENST00000399022 C17orf105B2RV13 164 aa13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 PRAMEF26H0Y7S4 382 aa13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 K7EPK0 472 aa13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 CD53P19397 219 aa13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 ARRB1P49407 418 aaPredicted RBP13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 CDK5R1Q15078 307 aa13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 FAM209BQ5JX69 171 aa13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 TMEM151BQ8IW70 566 aa13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 FAM71E2Q8N5Q1 922 aa13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 IL17RCQ8NAC3 791 aa13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 AVL9Q8NBF6 648 aa13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 OR1S2Q8NGQ3 325 aa13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 PLXNA1Q9UIW2 1896 aa13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 CKAP5Q14008 2032 aa13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 A0A0B4J293 547 aa13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 A0A1W2PS29 197 aa13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 DOK2O60496 412 aa13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 IL5P05113 134 aa13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 HERV-K104P61576 105 aa13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 RASGRP3Q8IV61 690 aa13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 ZNF547Q8IVP9 402 aa13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 SMIM19Q96E16 107 aa13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 CNRIP1Q96F85 164 aaPredicted RBP13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 TSPAN10Q9H1Z9 355 aaPredicted RBP13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 STEAP1Q9UHE8 339 aa13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 FAM74A7A6NL05 159 aa13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 FFAR1O14842 300 aa13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 GLULP15104 373 aa13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 ZNF44P15621 663 aa13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 SDHAP31040 664 aa13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 ADPRHP54922 357 aa13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 FAM74A3Q4VXF1 159 aa13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 LAMTOR1Q6IAA8 161 aa13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 LPCAT3Q6P1A2 487 aa13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 OR4D9Q8NGE8 314 aa13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 CD207Q9UJ71 328 aa13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 ICKQ9UPZ9 632 aa13.37□□□□□ -0.27
RPRD1A-202ENST00000399022 ZNF705FA8MVS1 300 aaPredicted RBP13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 PHYHO14832 338 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 IGF2P01344 180 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 ZNF705DP0CH99 300 aaPredicted RBP13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 ZNF705BP0CI00 300 aaPredicted RBP13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 GPR157Q5UAW9 335 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 SPRED2Q7Z698 418 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 OR5M9Q8NGP3 310 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 OR5B12Q96R08 314 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 PBX4Q9BYU1 374 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 SLC19A3Q9BZV2 496 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 METTL7AQ9H8H3 244 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 FBRSQ9HAH7 460 aa13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 FAM212BQ9NTI7 297 aaPredicted RBP13.36□□□□□ -0.27
RPRD1A-202ENST00000399022 KPTNQ9Y664 436 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms