RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 TCF7L1Q9HCS4 588 aa14.53□□□□□ -0.08
CHMP1A-201ENST00000397901 OR5V1Q9UGF6 321 aa14.53□□□□□ -0.08
CHMP1A-201ENST00000397901 FBXL21Q9UKT6 434 aa14.53□□□□□ -0.08
CHMP1A-201ENST00000397901 FOXJ3Q9UPW0 622 aa14.53□□□□□ -0.08
CHMP1A-201ENST00000397901 PLEKHA6Q9Y2H5 1048 aa14.53□□□□□ -0.08
CHMP1A-201ENST00000397901 ENTPD2Q9Y5L3 495 aa14.53□□□□□ -0.08
CHMP1A-201ENST00000397901 TBC1D3DA0A087WVF3 549 aa14.52□□□□□ -0.08
CHMP1A-201ENST00000397901 TBC1D3IA0A087WXS9 549 aa14.52□□□□□ -0.08
CHMP1A-201ENST00000397901 TRAV14DV4A0A0A6YYC5 116 aa14.52□□□□□ -0.08
CHMP1A-201ENST00000397901 POM121BA6NF01 834 aa14.52□□□□□ -0.08
CHMP1A-201ENST00000397901 URADA6NGE7 173 aa14.52□□□□□ -0.08
CHMP1A-201ENST00000397901 TBC1D3LB9A6J9 549 aa14.52□□□□□ -0.08
CHMP1A-201ENST00000397901 BCL2L11O43521 198 aa14.52□□□□□ -0.08
CHMP1A-201ENST00000397901 ZFPL1O95159 310 aa14.52□□□□□ -0.08
CHMP1A-201ENST00000397901 TBC1D3HP0C7X1 549 aa14.52□□□□□ -0.08
CHMP1A-201ENST00000397901 CDK2P24941 298 aa14.52□□□□□ -0.08
CHMP1A-201ENST00000397901 GGTLC2Q14390 218 aa14.52□□□□□ -0.08
CHMP1A-201ENST00000397901 TBC1D3CQ6IPX1 549 aa14.52□□□□□ -0.08
CHMP1A-201ENST00000397901 ENPP7Q6UWV6 458 aa14.52□□□□□ -0.08
CHMP1A-201ENST00000397901 YAF2Q8IY57 180 aa14.52□□□□□ -0.08
CHMP1A-201ENST00000397901 TBC1D3Q8IZP1 549 aaPredicted RBP14.52□□□□□ -0.08
CHMP1A-201ENST00000397901 MUC20Q8N307 709 aaPredicted RBP14.52□□□□□ -0.08
CHMP1A-201ENST00000397901 OR1E3Q8WZA6 343 aa14.52□□□□□ -0.08
CHMP1A-201ENST00000397901 WNT2BQ93097 391 aa14.52□□□□□ -0.08
CHMP1A-201ENST00000397901 S100A16Q96FQ6 103 aaKnown RBP14.52□□□□□ -0.08
CHMP1A-201ENST00000397901 MYADMQ96S97 322 aa14.52□□□□□ -0.08
CHMP1A-201ENST00000397901 KXD1Q9BQD3 176 aa14.52□□□□□ -0.08
CHMP1A-201ENST00000397901 SEC11CQ9BY50 192 aa14.52□□□□□ -0.08
CHMP1A-201ENST00000397901 TRIM2Q9C040 744 aa14.52□□□□□ -0.08
CHMP1A-201ENST00000397901 LMAN2LQ9H0V9 348 aa14.52□□□□□ -0.08
CHMP1A-201ENST00000397901 STARD5Q9NSY2 213 aa14.52□□□□□ -0.08
CHMP1A-201ENST00000397901 ZNF281Q9Y2X9 895 aa14.52□□□□□ -0.08
CHMP1A-201ENST00000397901 V9GY05 133 aa14.52□□□□□ -0.08
CHMP1A-201ENST00000397901 H0YGG7 62 aa14.52□□□□□ -0.09
CHMP1A-201ENST00000397901 H3BSH0 61 aa14.52□□□□□ -0.09
CHMP1A-201ENST00000397901 ICOSLGO75144 302 aa14.52□□□□□ -0.09
CHMP1A-201ENST00000397901 OR2F2O95006 317 aa14.52□□□□□ -0.09
CHMP1A-201ENST00000397901 IGKV1D-16P01601 117 aa14.52□□□□□ -0.09
CHMP1A-201ENST00000397901 APODP05090 189 aa14.52□□□□□ -0.09
CHMP1A-201ENST00000397901 ZNF10P21506 573 aaPredicted RBP14.52□□□□□ -0.09
CHMP1A-201ENST00000397901 SOX2P48431 317 aa14.52□□□□□ -0.09
CHMP1A-201ENST00000397901 ARF3P61204 181 aaPredicted RBP14.52□□□□□ -0.09
CHMP1A-201ENST00000397901 SRSF5Q13243 272 aaKnown RBP14.52□□□□□ -0.09
CHMP1A-201ENST00000397901 OR2F1Q13607 317 aa14.52□□□□□ -0.09
CHMP1A-201ENST00000397901 ZNF345Q14585 488 aa14.52□□□□□ -0.09
CHMP1A-201ENST00000397901 PWWP2BQ6NUJ5 590 aa14.52□□□□□ -0.09
CHMP1A-201ENST00000397901 WDSUB1Q8N9V3 476 aa14.52□□□□□ -0.09
CHMP1A-201ENST00000397901 NPEPL1Q8NDH3 523 aa14.52□□□□□ -0.09
CHMP1A-201ENST00000397901 TSACCQ96A04 125 aaPredicted RBP14.52□□□□□ -0.09
CHMP1A-201ENST00000397901 CNTNAP3BQ96NU0 1288 aa14.52□□□□□ -0.09
CHMP1A-201ENST00000397901 CDCA3Q99618 268 aaPredicted RBP14.52□□□□□ -0.09
CHMP1A-201ENST00000397901 WDR13Q9H1Z4 485 aa14.52□□□□□ -0.09
CHMP1A-201ENST00000397901 TMEM138Q9NPI0 162 aa14.52□□□□□ -0.09
CHMP1A-201ENST00000397901 METTL1Q9UBP6 276 aaKnown RBP14.52□□□□□ -0.09
CHMP1A-201ENST00000397901 PILRAQ9UKJ1 303 aa14.52□□□□□ -0.09
CHMP1A-201ENST00000397901 DMRT1Q9Y5R6 373 aa14.52□□□□□ -0.09
CHMP1A-201ENST00000397901 A0A1B0GTQ1 180 aa14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 EPOPA6NHQ4 379 aa14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 COLCA2A8K830 154 aa14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 NUDT19A8MXV4 375 aa14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 C2orf74A8MZ97 194 aa14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 ACOT7O00154 380 aa14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 GPRIN2O60269 458 aa14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 AK1P00568 194 aa14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 TMIGD3P0DMS9 266 aaPredicted RBP14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 FAUP35544 74 aaKnown RBP14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 MAP3K8P41279 467 aa14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 ACTR1BP42025 376 aa14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 RBM34P42696 430 aaKnown RBP14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 UBE2MP61081 183 aaKnown RBP14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 ACTR1AP61163 376 aa14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 ACER2Q5QJU3 275 aa14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 RAB12Q6IQ22 244 aa14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 LIN54Q6MZP7 749 aa14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 SLC22A18Q96BI1 424 aa14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 ZDHHC12Q96GR4 267 aa14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 MNTQ99583 582 aa14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 SPACA6W5XKT8 324 aa14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 SPTBN5Q9NRC6 3674 aaKnown RBP14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 H0Y8X5 98 aa14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 CYR61O00622 381 aa14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 RLN1P04808 185 aa14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 SHHQ15465 462 aa14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 NNATQ16517 81 aa14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 SGCAQ16586 387 aa14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 CDNFQ49AH0 187 aa14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 ZCCHC12Q6PEW1 402 aa14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 RERGQ96A58 199 aaPredicted RBP14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 ZNF75AQ96N20 296 aa14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 ZNF471Q9BX82 626 aaPredicted RBP14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 UCK1Q9HA47 277 aa14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 LYRM4Q9HD34 91 aa14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 MKKSQ9NPJ1 570 aaPredicted RBP14.51□□□□□ -0.09
CHMP1A-201ENST00000397901 LINC01565O15544 149 aa14.5□□□□□ -0.09
CHMP1A-201ENST00000397901 NKX2-2O95096 273 aa14.5□□□□□ -0.09
CHMP1A-201ENST00000397901 F12P00748 615 aaPredicted RBP14.5□□□□□ -0.09
CHMP1A-201ENST00000397901 OR8G3PP0DMU2 310 aa14.5□□□□□ -0.09
CHMP1A-201ENST00000397901 GDI1P31150 447 aa14.5□□□□□ -0.09
CHMP1A-201ENST00000397901 OR2B11Q5JQS5 317 aa14.5□□□□□ -0.09
CHMP1A-201ENST00000397901 TEX30Q5JUR7 227 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms