RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 TSSK2Q96PF2 358 aa4.59□□□□□ -1.68
SSR1-202ENST00000397511 OR2M4Q96R27 311 aa4.59□□□□□ -1.68
SSR1-202ENST00000397511 TEAD3Q99594 435 aa4.59□□□□□ -1.68
SSR1-202ENST00000397511 ARHGDIGQ99819 225 aa4.59□□□□□ -1.68
SSR1-202ENST00000397511 PRSS27Q9BQR3 290 aa4.59□□□□□ -1.68
SSR1-202ENST00000397511 GGACTQ9BVM4 153 aa4.59□□□□□ -1.68
SSR1-202ENST00000397511 MTHFD2LQ9H903 347 aaPredicted RBP4.59□□□□□ -1.68
SSR1-202ENST00000397511 MEPEQ9NQ76 525 aaPredicted RBP4.59□□□□□ -1.68
SSR1-202ENST00000397511 DZANK1Q9NVP4 752 aa4.59□□□□□ -1.68
SSR1-202ENST00000397511 GFOD1Q9NXC2 390 aa4.59□□□□□ -1.68
SSR1-202ENST00000397511 RCE1Q9Y256 329 aa4.59□□□□□ -1.68
SSR1-202ENST00000397511 SLC17A4Q9Y2C5 497 aa4.59□□□□□ -1.68
SSR1-202ENST00000397511 AK6Q9Y3D8 172 aaKnown RBP4.59□□□□□ -1.68
SSR1-202ENST00000397511 FANCMQ8IYD8 2048 aa4.59□□□□□ -1.68
SSR1-202ENST00000397511 CABIN1Q9Y6J0 2220 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 C9orf170A2RU37 121 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 DUXAA6NLW8 204 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 COLCA2A8K830 154 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 NUDT19A8MXV4 375 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 J3KRW8 73 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 CTDSPLO15194 276 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 TCAPO15273 167 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 OR10H2O60403 315 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 TBX19O60806 448 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 RPP14O95059 124 aaKnown RBP4.58□□□□□ -1.68
SSR1-202ENST00000397511 CD2P06729 351 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 ZNF44P15621 663 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 PAX6P26367 422 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 BDKRB2P30411 391 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 AGTR1P30556 359 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 HTR1FP30939 366 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 TLX1P31314 330 aaPredicted RBP4.58□□□□□ -1.68
SSR1-202ENST00000397511 RPL4P36578 427 aaKnown RBP4.58□□□□□ -1.68
SSR1-202ENST00000397511 EMDP50402 254 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 CASP6P55212 293 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 PPIAP62937 165 aaKnown RBP4.58□□□□□ -1.68
SSR1-202ENST00000397511 DLX2Q07687 328 aaPredicted RBP4.58□□□□□ -1.68
SSR1-202ENST00000397511 LBHQ53QV2 105 aaPredicted RBP4.58□□□□□ -1.68
SSR1-202ENST00000397511 ZNF776Q68DI1 518 aaPredicted RBP4.58□□□□□ -1.68
SSR1-202ENST00000397511 LIN54Q6MZP7 749 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 FAAP20Q6NZ36 180 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 FIGLAQ6QHK4 219 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 CD300LDQ6UXZ3 194 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 TMEM64Q6YI46 380 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 RNF44Q7L0R7 432 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 OR2W3Q7Z3T1 314 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 OR1S2Q8NGQ3 325 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 THEM6Q8WUY1 208 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 ZNRF4Q8WWF5 429 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 ASB13Q8WXK3 278 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 THAP4Q8WY91 577 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 GHSRQ92847 366 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 RERGQ96A58 199 aaPredicted RBP4.58□□□□□ -1.68
SSR1-202ENST00000397511 MRPL38Q96DV4 380 aaKnown RBP4.58□□□□□ -1.68
SSR1-202ENST00000397511 WDR89Q96FK6 387 aaPredicted RBP4.58□□□□□ -1.68
SSR1-202ENST00000397511 MEGF10Q96KG7 1140 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 HS6ST2Q96MM7 605 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 OR2A5Q96R48 311 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 LMF1Q96S06 567 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 GAS2L1Q99501 681 aaPredicted RBP4.58□□□□□ -1.68
SSR1-202ENST00000397511 VRK1Q99986 396 aaPredicted RBP4.58□□□□□ -1.68
SSR1-202ENST00000397511 CCDC3Q9BQI4 270 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 ZNF649Q9BS31 505 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 SEC11CQ9BY50 192 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 TOLLIPQ9H0E2 274 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 SLC25A18Q9H1K4 315 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 TREM1Q9NP99 234 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 A0A0A6YYC8 382 aaPredicted RBP4.58□□□□□ -1.68
SSR1-202ENST00000397511 CDHR4A6H8M9 788 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 EPOPA6NHQ4 379 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 C17orf51A8MQB3 221 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 BLOC1S5-TXNDC5H3BN57 136 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 I3L1I5 382 aaPredicted RBP4.58□□□□□ -1.68
SSR1-202ENST00000397511 GOSR2O14653 212 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 KLF4O43474 513 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 ADH1BP00325 375 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 NGFRP08138 427 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 ANXA7P20073 488 aaKnown RBP4.58□□□□□ -1.68
SSR1-202ENST00000397511 HTR5AP47898 357 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 TRA2BP62995 288 aaKnown RBP4.58□□□□□ -1.68
SSR1-202ENST00000397511 SQSTM1Q13501 440 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 KCNAB1Q14722 419 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 DECR1Q16698 335 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 AKIRIN2Q53H80 203 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 ALG10BQ5I7T1 473 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 TCEAL6Q6IPX3 200 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 NIPAL3Q6P499 406 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 C11orf88Q6PI97 169 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 APOOLQ6UXV4 268 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 MEPCEQ7L2J0 689 aaKnown RBP4.58□□□□□ -1.68
SSR1-202ENST00000397511 SLC29A4Q7RTT9 530 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 DPPA2Q7Z7J5 298 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 CDK20Q8IZL9 346 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 C10orf53Q8N6V4 93 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 ZNF485Q8NCK3 441 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 OR52R1Q8NGF1 315 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 OR5M1Q8NGP8 315 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 ZPLD1Q8TCW7 415 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 SMPDL3BQ92485 455 aa4.58□□□□□ -1.68
SSR1-202ENST00000397511 ARL11Q969Q4 196 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms