RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 RNPS1Q15287 305 aaKnown RBP24.37■■□□□ 1.49
CPNE1-203ENST00000397442 DNM1P34Q6PK57 102 aa24.37■■□□□ 1.49
CPNE1-203ENST00000397442 SLC25A47Q6Q0C1 308 aa24.37■■□□□ 1.49
CPNE1-203ENST00000397442 LHFPL3Q86UP9 236 aa24.37■■□□□ 1.49
CPNE1-203ENST00000397442 ACBD7Q8N6N7 88 aa24.37■■□□□ 1.49
CPNE1-203ENST00000397442 NANOGP1Q8N7R0 232 aa24.37■■□□□ 1.49
CPNE1-203ENST00000397442 FNDC8Q8TC99 324 aa24.37■■□□□ 1.49
CPNE1-203ENST00000397442 MRPL22Q9NWU5 206 aaKnown RBP24.37■■□□□ 1.49
CPNE1-203ENST00000397442 GLTPQ9NZD2 209 aa24.37■■□□□ 1.49
CPNE1-203ENST00000397442 A6NHS1 94 aa24.36■■□□□ 1.49
CPNE1-203ENST00000397442 ZNF724A8MTY0 619 aa24.36■■□□□ 1.49
CPNE1-203ENST00000397442 GPR171O14626 319 aa24.36■■□□□ 1.49
CPNE1-203ENST00000397442 KHDRBS3O75525 346 aaKnown RBP24.36■■□□□ 1.49
CPNE1-203ENST00000397442 MYL12AP19105 171 aa24.36■■□□□ 1.49
CPNE1-203ENST00000397442 CSNK1A1P48729 337 aa24.36■■□□□ 1.49
CPNE1-203ENST00000397442 ZNF133P52736 654 aaPredicted RBP24.36■■□□□ 1.49
CPNE1-203ENST00000397442 AAED1Q7RTV5 226 aa24.36■■□□□ 1.49
CPNE1-203ENST00000397442 TUSC5Q8IXB3 177 aa24.36■■□□□ 1.49
CPNE1-203ENST00000397442 C20orf196Q8IYI0 205 aa24.36■■□□□ 1.49
CPNE1-203ENST00000397442 OR10H4Q8NGA5 316 aa24.36■■□□□ 1.49
CPNE1-203ENST00000397442 OR5M11Q96RB7 305 aa24.36■■□□□ 1.49
CPNE1-203ENST00000397442 TBX5Q99593 518 aa24.36■■□□□ 1.49
CPNE1-203ENST00000397442 WDR76Q9H967 626 aa24.36■■□□□ 1.49
CPNE1-203ENST00000397442 ERGIC3Q9Y282 383 aa24.36■■□□□ 1.49
CPNE1-203ENST00000397442 GTF3C1Q12789 2109 aa24.36■■□□□ 1.49
CPNE1-203ENST00000397442 QDPRP09417 244 aa24.35■■□□□ 1.49
CPNE1-203ENST00000397442 CENPAP49450 140 aa24.35■■□□□ 1.49
CPNE1-203ENST00000397442 GP2P55259 537 aaKnown RBP24.35■■□□□ 1.49
CPNE1-203ENST00000397442 GLO1Q04760 184 aa24.35■■□□□ 1.49
CPNE1-203ENST00000397442 RAB39AQ14964 217 aa24.35■■□□□ 1.49
CPNE1-203ENST00000397442 SLC35F2Q8IXU6 374 aa24.35■■□□□ 1.49
CPNE1-203ENST00000397442 TEX19Q8NA77 164 aa24.35■■□□□ 1.49
CPNE1-203ENST00000397442 NSMAFQ92636 917 aa24.35■■□□□ 1.49
CPNE1-203ENST00000397442 RORBQ92753 470 aa24.35■■□□□ 1.49
CPNE1-203ENST00000397442 SLC25A18Q9H1K4 315 aa24.35■■□□□ 1.49
CPNE1-203ENST00000397442 EMC3Q9P0I2 261 aa24.35■■□□□ 1.49
CPNE1-203ENST00000397442 CLEC4AQ9UMR7 237 aa24.35■■□□□ 1.49
CPNE1-203ENST00000397442 ZNF99A8MXY4 864 aaPredicted RBP24.34■■□□□ 1.49
CPNE1-203ENST00000397442 GAAP10253 952 aa24.34■■□□□ 1.49
CPNE1-203ENST00000397442 PSKH1P11801 424 aa24.34■■□□□ 1.49
CPNE1-203ENST00000397442 CD79BP40259 229 aa24.34■■□□□ 1.49
CPNE1-203ENST00000397442 BLVRAP53004 296 aa24.34■■□□□ 1.49
CPNE1-203ENST00000397442 ZNF85Q03923 595 aa24.34■■□□□ 1.49
CPNE1-203ENST00000397442 SYT6Q5T7P8 510 aaPredicted RBP24.34■■□□□ 1.49
CPNE1-203ENST00000397442 OTPQ5XKR4 325 aa24.34■■□□□ 1.49
CPNE1-203ENST00000397442 SLC16A9Q7RTY1 509 aa24.34■■□□□ 1.49
CPNE1-203ENST00000397442 ERI1Q8IV48 349 aaKnown RBP24.34■■□□□ 1.49
CPNE1-203ENST00000397442 RFLNBQ8N5W9 214 aa24.34■■□□□ 1.49
CPNE1-203ENST00000397442 SLC26A10Q8NG04 563 aa24.34■■□□□ 1.49
CPNE1-203ENST00000397442 OR6N1Q8NGY5 312 aa24.34■■□□□ 1.49
CPNE1-203ENST00000397442 FCGR1BQ92637 280 aa24.34■■□□□ 1.49
CPNE1-203ENST00000397442 SNRNP40Q96DI7 357 aaKnown RBP24.34■■□□□ 1.49
CPNE1-203ENST00000397442 MAP1BP46821 2468 aaKnown RBP24.34■■□□□ 1.49
CPNE1-203ENST00000397442 ITPR1Q14643 2758 aa24.34■■□□□ 1.49
CPNE1-203ENST00000397442 A0A1W2PQL4 384 aaPredicted RBP24.34■■□□□ 1.49
CPNE1-203ENST00000397442 TMEM129A0AVI4 362 aa24.34■■□□□ 1.49
CPNE1-203ENST00000397442 MPZL1O95297 269 aa24.34■■□□□ 1.49
CPNE1-203ENST00000397442 OR2T7P0C7T2 308 aa24.34■■□□□ 1.49
CPNE1-203ENST00000397442 OR2G6Q5TZ20 316 aa24.34■■□□□ 1.49
CPNE1-203ENST00000397442 C19orf48Q6RUI8 117 aa24.34■■□□□ 1.49
CPNE1-203ENST00000397442 ZNF485Q8NCK3 441 aa24.34■■□□□ 1.49
CPNE1-203ENST00000397442 OR2T27Q8NH04 317 aa24.34■■□□□ 1.49
CPNE1-203ENST00000397442 INTS12Q96CB8 462 aaKnown RBP24.34■■□□□ 1.49
CPNE1-203ENST00000397442 INTS14Q96SY0 518 aa24.34■■□□□ 1.49
CPNE1-203ENST00000397442 SLX1AQ9BQ83 275 aa24.34■■□□□ 1.49
CPNE1-203ENST00000397442 MND1Q9BWT6 205 aa24.34■■□□□ 1.49
CPNE1-203ENST00000397442 INPP5EQ9NRR6 644 aa24.34■■□□□ 1.49
CPNE1-203ENST00000397442 COPS3Q9UNS2 423 aa24.34■■□□□ 1.49
CPNE1-203ENST00000397442 NOSIPQ9Y314 301 aaKnown RBP24.34■■□□□ 1.49
CPNE1-203ENST00000397442 PKD1L2Q7Z442 2459 aa24.33■■□□□ 1.49
CPNE1-203ENST00000397442 MED12LQ86YW9 2145 aa24.33■■□□□ 1.49
CPNE1-203ENST00000397442 AHRRA9YTQ3 701 aa24.33■■□□□ 1.49
CPNE1-203ENST00000397442 SLC43A1O75387 559 aa24.33■■□□□ 1.49
CPNE1-203ENST00000397442 YES1P07947 543 aa24.33■■□□□ 1.49
CPNE1-203ENST00000397442 FCGR2AP12318 317 aa24.33■■□□□ 1.49
CPNE1-203ENST00000397442 NR2C1P13056 603 aa24.33■■□□□ 1.49
CPNE1-203ENST00000397442 EDNRAP25101 427 aa24.33■■□□□ 1.49
CPNE1-203ENST00000397442 ACTC1P68032 377 aa24.33■■□□□ 1.49
CPNE1-203ENST00000397442 ACTA1P68133 377 aa24.33■■□□□ 1.49
CPNE1-203ENST00000397442 PRR30Q53SZ7 412 aaPredicted RBP24.33■■□□□ 1.49
CPNE1-203ENST00000397442 SSX6Q7RTT6 188 aa24.33■■□□□ 1.49
CPNE1-203ENST00000397442 GLB1L2Q8IW92 636 aa24.33■■□□□ 1.49
CPNE1-203ENST00000397442 TRIB1Q96RU8 372 aa24.33■■□□□ 1.49
CPNE1-203ENST00000397442 ACACBO00763 2458 aa24.33■■□□□ 1.49
CPNE1-203ENST00000397442 DAPL1A0PJW8 107 aa24.32■■□□□ 1.48
CPNE1-203ENST00000397442 MYL12BO14950 172 aa24.32■■□□□ 1.48
CPNE1-203ENST00000397442 SEC14L2O76054 403 aa24.32■■□□□ 1.48
CPNE1-203ENST00000397442 HLA-DQA2P01906 255 aa24.32■■□□□ 1.48
CPNE1-203ENST00000397442 HSF2Q03933 536 aa24.32■■□□□ 1.48
CPNE1-203ENST00000397442 GALEQ14376 348 aa24.32■■□□□ 1.48
CPNE1-203ENST00000397442 MEP1BQ16820 701 aa24.32■■□□□ 1.48
CPNE1-203ENST00000397442 ACSF3Q4G176 576 aaPredicted RBP24.32■■□□□ 1.48
CPNE1-203ENST00000397442 C10orf128Q5T292 105 aa24.32■■□□□ 1.48
CPNE1-203ENST00000397442 CDC20BQ86Y33 519 aa24.32■■□□□ 1.48
CPNE1-203ENST00000397442 OR13F1Q8NGS4 319 aa24.32■■□□□ 1.48
CPNE1-203ENST00000397442 CALHM2Q9HA72 323 aa24.32■■□□□ 1.48
CPNE1-203ENST00000397442 GP6Q9HCN6 339 aa24.32■■□□□ 1.48
CPNE1-203ENST00000397442 CHCHD3Q9NX63 227 aaKnown RBP24.32■■□□□ 1.48
CPNE1-203ENST00000397442 UGT2A1Q9Y4X1 527 aa24.32■■□□□ 1.48
CPNE1-203ENST00000397442 UPK3AO75631 287 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms