RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 SRA1Q9HD15 236 aaKnown RBP20.79■□□□□ 0.92
TSPAN4-203ENST00000397397 HINT3Q9NQE9 182 aaKnown RBP20.79■□□□□ 0.92
TSPAN4-203ENST00000397397 RPL36A-HNRNPH2H7BZ11 118 aa20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 DHHO43323 396 aa20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 CLIC3O95833 236 aa20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 CTLA4P16410 223 aa20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 AGAP20933 346 aa20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 CRABP1P29762 137 aa20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 ZNF133P52736 654 aaPredicted RBP20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 FOXG1P55316 489 aaPredicted RBP20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 PLBD1Q6P4A8 553 aa20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 DNM1P34Q6PK57 102 aa20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 CXXC5Q7LFL8 322 aaKnown RBP20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 CPOQ8IVL8 374 aa20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 GABRG1Q8N1C3 465 aa20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 TMEM163Q8TC26 289 aa20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 TFAP2CQ92754 450 aa20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 UBE2FQ969M7 185 aa20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 ZNF837Q96EG3 531 aaPredicted RBP20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 B9D1Q9UPM9 204 aa20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 KHDRBS3O75525 346 aaKnown RBP20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 IGHV1-2P23083 117 aa20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 MPGP29372 298 aa20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 ASCL1P50553 236 aa20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 ZNF84P51523 738 aa20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 SLC25A1P53007 311 aa20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 EFNB1P98172 346 aa20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 DBPQ10586 325 aaPredicted RBP20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 CDSNQ15517 529 aa20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 ETFDHQ16134 617 aa20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 C10orf128Q5T292 105 aa20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 ZNF691Q5VV52 312 aa20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 OR6V1Q8N148 313 aa20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 OR8J1Q8NGP2 316 aa20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 HCAR1Q9BXC0 346 aa20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 NMNAT2Q9BZQ4 307 aa20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 ZNF226Q9NYT6 803 aa20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 FKBP7Q9Y680 259 aa20.78■□□□□ 0.92
TSPAN4-203ENST00000397397 NKX2-6A6NCS4 301 aa20.77■□□□□ 0.91
TSPAN4-203ENST00000397397 DCTN6O00399 190 aa20.77■□□□□ 0.91
TSPAN4-203ENST00000397397 AGFG2O95081 481 aa20.77■□□□□ 0.91
TSPAN4-203ENST00000397397 ITGA5P08648 1049 aa20.77■□□□□ 0.91
TSPAN4-203ENST00000397397 CXorf67Q86X51 503 aaPredicted RBP20.77■□□□□ 0.91
TSPAN4-203ENST00000397397 OR2T4Q8NH00 348 aa20.77■□□□□ 0.91
TSPAN4-203ENST00000397397 TRUB1Q8WWH5 349 aaKnown RBP20.77■□□□□ 0.91
TSPAN4-203ENST00000397397 PTP4A1Q93096 173 aa20.77■□□□□ 0.91
TSPAN4-203ENST00000397397 ZNF184Q99676 751 aaPredicted RBP20.77■□□□□ 0.91
TSPAN4-203ENST00000397397 KCNJ16Q9NPI9 418 aa20.77■□□□□ 0.91
TSPAN4-203ENST00000397397 GYPBP06028 91 aa20.76■□□□□ 0.91
TSPAN4-203ENST00000397397 CLUP10909 449 aa20.76■□□□□ 0.91
TSPAN4-203ENST00000397397 SPI1P17947 270 aa20.76■□□□□ 0.91
TSPAN4-203ENST00000397397 PYCR1P32322 319 aa20.76■□□□□ 0.91
TSPAN4-203ENST00000397397 CENPAP49450 140 aa20.76■□□□□ 0.91
TSPAN4-203ENST00000397397 ARF1P84077 181 aaKnown RBP20.76■□□□□ 0.91
TSPAN4-203ENST00000397397 IL5RAQ01344 420 aa20.76■□□□□ 0.91
TSPAN4-203ENST00000397397 IL18R1Q13478 541 aa20.76■□□□□ 0.91
TSPAN4-203ENST00000397397 P2RY6Q15077 328 aa20.76■□□□□ 0.91
TSPAN4-203ENST00000397397 STK11Q15831 433 aa20.76■□□□□ 0.91
TSPAN4-203ENST00000397397 ENTHD1Q8IYW4 607 aa20.76■□□□□ 0.91
TSPAN4-203ENST00000397397 SETD9Q8NE22 299 aa20.76■□□□□ 0.91
TSPAN4-203ENST00000397397 PROKR2Q8NFJ6 384 aa20.76■□□□□ 0.91
TSPAN4-203ENST00000397397 MUS81Q96NY9 551 aa20.76■□□□□ 0.91
TSPAN4-203ENST00000397397 OR51V1Q9H2C8 321 aa20.76■□□□□ 0.91
TSPAN4-203ENST00000397397 RASSF1Q9NS23 344 aa20.76■□□□□ 0.91
TSPAN4-203ENST00000397397 ELOVL5Q9NYP7 299 aa20.76■□□□□ 0.91
TSPAN4-203ENST00000397397 TAS2R16Q9NYV7 291 aa20.76■□□□□ 0.91
TSPAN4-203ENST00000397397 COA3Q9Y2R0 106 aaPredicted RBP20.76■□□□□ 0.91
TSPAN4-203ENST00000397397 IGLV1-36A0A0B4J1U3 117 aa20.75■□□□□ 0.91
TSPAN4-203ENST00000397397 A0A1W2PPL8 197 aa20.75■□□□□ 0.91
TSPAN4-203ENST00000397397 FAM171A2A8MVW0 826 aa20.75■□□□□ 0.91
TSPAN4-203ENST00000397397 LYZL6O75951 148 aa20.75■□□□□ 0.91
TSPAN4-203ENST00000397397 CLDN14O95500 239 aa20.75■□□□□ 0.91
TSPAN4-203ENST00000397397 GNAO1P09471 354 aa20.75■□□□□ 0.91
TSPAN4-203ENST00000397397 COX5AP20674 150 aa20.75■□□□□ 0.91
TSPAN4-203ENST00000397397 SNRPGP62308 76 aaKnown RBP20.75■□□□□ 0.91
TSPAN4-203ENST00000397397 BCDIN3DQ7Z5W3 292 aaKnown RBP20.75■□□□□ 0.91
TSPAN4-203ENST00000397397 ZBTB46Q86UZ6 589 aa20.75■□□□□ 0.91
TSPAN4-203ENST00000397397 FAM26EQ8N5C1 309 aa20.75■□□□□ 0.91
TSPAN4-203ENST00000397397 ZNF433Q8N7K0 673 aaPredicted RBP20.75■□□□□ 0.91
TSPAN4-203ENST00000397397 BBS1Q8NFJ9 593 aa20.75■□□□□ 0.91
TSPAN4-203ENST00000397397 OR51L1Q8NGJ5 315 aa20.75■□□□□ 0.91
TSPAN4-203ENST00000397397 FOXN4Q96NZ1 517 aa20.75■□□□□ 0.91
TSPAN4-203ENST00000397397 RACGAP1Q9H0H5 632 aa20.75■□□□□ 0.91
TSPAN4-203ENST00000397397 GALNT8Q9NY28 637 aa20.75■□□□□ 0.91
TSPAN4-203ENST00000397397 UGT2A1Q9Y4X1 527 aa20.75■□□□□ 0.91
TSPAN4-203ENST00000397397 CIB4A0PJX0 185 aa20.74■□□□□ 0.91
TSPAN4-203ENST00000397397 ZNF99A8MXY4 864 aaPredicted RBP20.74■□□□□ 0.91
TSPAN4-203ENST00000397397 MPZL2O60487 215 aa20.74■□□□□ 0.91
TSPAN4-203ENST00000397397 SEC14L2O76054 403 aa20.74■□□□□ 0.91
TSPAN4-203ENST00000397397 CD79BP40259 229 aa20.74■□□□□ 0.91
TSPAN4-203ENST00000397397 SH3BGRP55822 239 aaPredicted RBP20.74■□□□□ 0.91
TSPAN4-203ENST00000397397 TGFBR3Q03167 851 aa20.74■□□□□ 0.91
TSPAN4-203ENST00000397397 FAM27E3Q08E93 113 aa20.74■□□□□ 0.91
TSPAN4-203ENST00000397397 TSC22D1Q15714 1073 aa20.74■□□□□ 0.91
TSPAN4-203ENST00000397397 KLHL12Q53G59 568 aa20.74■□□□□ 0.91
TSPAN4-203ENST00000397397 SFRP5Q5T4F7 317 aa20.74■□□□□ 0.91
TSPAN4-203ENST00000397397 C8orf59Q8N0T1 100 aaPredicted RBP20.74■□□□□ 0.91
TSPAN4-203ENST00000397397 LRRC46Q96FV0 321 aa20.74■□□□□ 0.91
TSPAN4-203ENST00000397397 FOXB1Q99853 325 aa20.74■□□□□ 0.91
TSPAN4-203ENST00000397397 SEC61A2Q9H9S3 476 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms