RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 TMEM251Q8N6I4 163 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 LFNGQ8NES3 379 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 OR6F1Q8NGZ6 308 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 ITFG1Q8TB96 612 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 NDRG1Q92597 394 aaKnown RBP4.17□□□□□ -1.74
GABPB1-204ENST00000396464 HGDQ93099 445 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 SCMH1Q96GD3 660 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 SNF8Q96H20 258 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 C2orf48Q96LS8 159 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 MCCC1Q96RQ3 725 aaPredicted RBP4.17□□□□□ -1.74
GABPB1-204ENST00000396464 LGMNQ99538 433 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 CIB1Q99828 191 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 TRIM51Q9BSJ1 452 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 KRTAP1-5Q9BYS1 174 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 ING2Q9H160 280 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 ADGRL4Q9HBW9 690 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 HRASLSQ9HDD0 168 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 MEPEQ9NQ76 525 aaPredicted RBP4.17□□□□□ -1.74
GABPB1-204ENST00000396464 CLN6Q9NWW5 311 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 THUMPD1Q9NXG2 353 aaKnown RBP4.17□□□□□ -1.74
GABPB1-204ENST00000396464 TAS2R16Q9NYV7 291 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 RALYQ9UKM9 306 aaKnown RBP4.17□□□□□ -1.74
GABPB1-204ENST00000396464 NTNG1Q9Y2I2 539 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 MRPS18BQ9Y676 258 aaKnown RBP4.17□□□□□ -1.74
GABPB1-204ENST00000396464 RAPGEF2Q9Y4G8 1499 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 CNTNAP1P78357 1384 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 FHAD1B1AJZ9 1412 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 TRAV8-7A0A075B6U6 113 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 A0A1B0GTH9 108 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.16□□□□□ -1.74
GABPB1-204ENST00000396464 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.16□□□□□ -1.74
GABPB1-204ENST00000396464 PDHXO00330 501 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 ENSAO43768 121 aaKnown RBP4.16□□□□□ -1.74
GABPB1-204ENST00000396464 SOX15O60248 233 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 CLDN11O75508 207 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 UGT2B17O75795 530 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 CEACAM4O75871 244 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 CLIC3O95833 236 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 CATP04040 527 aaKnown RBP4.16□□□□□ -1.74
GABPB1-204ENST00000396464 SERPINA5P05154 406 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 LGALS2P05162 132 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 TACSTD2P09758 323 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 MAGEA3P43357 314 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 RWDD2BP57060 319 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 OR2B8PP59922 312 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 HILS1P60008 231 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 HERV-K104P61576 105 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 DHODHQ02127 395 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 TLE4Q04727 773 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 CKAP4Q07065 602 aaKnown RBP4.16□□□□□ -1.74
GABPB1-204ENST00000396464 CDC20Q12834 499 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 FHL1Q13642 323 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 EMC2Q15006 297 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 DCST2Q5T1A1 773 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 SLC18B1Q6NT16 456 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 ZFP82Q8N141 532 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 TBC1D19Q8N5T2 526 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 EID2Q8N6I1 236 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 OR6K6Q8NGW6 343 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 RPLP0P6Q8NHW5 317 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 ZNF502Q8TBZ5 544 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 SPPL2AQ8TCT8 520 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 HPSE2Q8WWQ2 592 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 MRPS31Q92665 395 aaKnown RBP4.16□□□□□ -1.74
GABPB1-204ENST00000396464 RNF145Q96MT1 663 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 MS4A4EQ96PG1 132 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 CABLES2Q9BTV7 478 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 FAIM2Q9BWQ8 316 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 NAT10Q9H0A0 1025 aaKnown RBP4.16□□□□□ -1.74
GABPB1-204ENST00000396464 RNF41Q9H4P4 317 aaPredicted RBP4.16□□□□□ -1.74
GABPB1-204ENST00000396464 TMEM38AQ9H6F2 299 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 CWH43Q9H720 699 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 PLEKHA3Q9HB20 300 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 TMBIM4Q9HC24 238 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 IFT46Q9NQC8 304 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 BABAM2Q9NXR7 383 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 NUDT4Q9NZJ9 180 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 ERVW-1Q9UQF0 538 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 PPP1R3CQ9UQK1 317 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 SLC22A13Q9Y226 551 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 SELENOKQ9Y6D0 94 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 ABCB11O95342 1321 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 MROH7Q68CQ1 1323 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 ANKRD30BQ9BXX2 1392 aa4.16□□□□□ -1.74
GABPB1-204ENST00000396464 GRIN2AQ12879 1464 aa4.15□□□□□ -1.74
GABPB1-204ENST00000396464 A0A1B0GVT2 93 aa4.15□□□□□ -1.74
GABPB1-204ENST00000396464 SEC14L6B5MCN3 397 aa4.15□□□□□ -1.74
GABPB1-204ENST00000396464 TMEM238C9JI98 176 aa4.15□□□□□ -1.74
GABPB1-204ENST00000396464 H0Y980 276 aa4.15□□□□□ -1.74
GABPB1-204ENST00000396464 SPRY3O43610 288 aa4.15□□□□□ -1.74
GABPB1-204ENST00000396464 CYTH3O43739 400 aa4.15□□□□□ -1.74
GABPB1-204ENST00000396464 ALOX12BO75342 701 aa4.15□□□□□ -1.74
GABPB1-204ENST00000396464 EEDO75530 441 aaKnown RBP4.15□□□□□ -1.74
GABPB1-204ENST00000396464 ASS1P00966 412 aaKnown RBP4.15□□□□□ -1.74
GABPB1-204ENST00000396464 ORM1P02763 201 aa4.15□□□□□ -1.74
GABPB1-204ENST00000396464 RPLP0P05388 317 aaKnown RBP4.15□□□□□ -1.74
GABPB1-204ENST00000396464 SLC2A2P11168 524 aaPredicted RBP4.15□□□□□ -1.74
GABPB1-204ENST00000396464 CSNK2A2P19784 350 aaPredicted RBP4.15□□□□□ -1.74
GABPB1-204ENST00000396464 PEX3P56589 373 aa4.15□□□□□ -1.74
GABPB1-204ENST00000396464 C2orf54Q08AI8 447 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms