RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 IL17RELQ6ZVW7 336 aa15.73■□□□□ 0.11
FXN-203ENST00000396366 CXXC5Q7LFL8 322 aaKnown RBP15.73■□□□□ 0.11
FXN-203ENST00000396366 SLC16A14Q7RTX9 510 aa15.73■□□□□ 0.11
FXN-203ENST00000396366 CLDN22Q8N7P3 220 aa15.73■□□□□ 0.11
FXN-203ENST00000396366 SLC30A7Q8NEW0 376 aa15.73■□□□□ 0.11
FXN-203ENST00000396366 UBASH3BQ8TF42 649 aa15.73■□□□□ 0.11
FXN-203ENST00000396366 HDAC2Q92769 488 aaKnown RBP15.73■□□□□ 0.11
FXN-203ENST00000396366 BEX2Q9BXY8 128 aa15.73■□□□□ 0.11
FXN-203ENST00000396366 CHODLQ9H9P2 273 aa15.73■□□□□ 0.11
FXN-203ENST00000396366 MAN2C1Q9NTJ4 1040 aa15.73■□□□□ 0.11
FXN-203ENST00000396366 DUSP13Q9UII6 198 aa15.73■□□□□ 0.11
FXN-203ENST00000396366 FBXO9Q9UK97 447 aaPredicted RBP15.73■□□□□ 0.11
FXN-203ENST00000396366 SLC22A2O15244 555 aa15.72■□□□□ 0.11
FXN-203ENST00000396366 SYNGR3O43761 229 aa15.72■□□□□ 0.11
FXN-203ENST00000396366 LMX1BO60663 402 aa15.72■□□□□ 0.11
FXN-203ENST00000396366 FARS2O95363 451 aaKnown RBP15.72■□□□□ 0.11
FXN-203ENST00000396366 IGFBP5P24593 272 aa15.72■□□□□ 0.11
FXN-203ENST00000396366 GIFP27352 417 aa15.72■□□□□ 0.11
FXN-203ENST00000396366 EVX1P49640 407 aa15.72■□□□□ 0.11
FXN-203ENST00000396366 DAP3P51398 398 aaKnown RBP15.72■□□□□ 0.11
FXN-203ENST00000396366 ERVS71-1P61550 626 aa15.72■□□□□ 0.11
FXN-203ENST00000396366 ST3GAL3Q11203 375 aa15.72■□□□□ 0.11
FXN-203ENST00000396366 TRIP10Q15642 601 aa15.72■□□□□ 0.11
FXN-203ENST00000396366 ALKBH6Q3KRA9 238 aa15.72■□□□□ 0.11
FXN-203ENST00000396366 HSP90B2PQ58FF3 399 aa15.72■□□□□ 0.11
FXN-203ENST00000396366 IGFN1Q86VF2 1251 aa15.72■□□□□ 0.11
FXN-203ENST00000396366 ZNF786Q8N393 782 aa15.72■□□□□ 0.11
FXN-203ENST00000396366 NMD3Q96D46 503 aaKnown RBP15.72■□□□□ 0.11
FXN-203ENST00000396366 BPIFA2Q96DR5 249 aa15.72■□□□□ 0.11
FXN-203ENST00000396366 PRRC1Q96M27 445 aa15.72■□□□□ 0.11
FXN-203ENST00000396366 CDC42EP3Q9UKI2 254 aa15.72■□□□□ 0.11
FXN-203ENST00000396366 UGT2A1Q9Y4X1 527 aa15.72■□□□□ 0.11
FXN-203ENST00000396366 M0R233 179 aa15.71■□□□□ 0.11
FXN-203ENST00000396366 CXCR6O00574 342 aa15.71■□□□□ 0.11
FXN-203ENST00000396366 LILRA1O75019 489 aa15.71■□□□□ 0.11
FXN-203ENST00000396366 ZNF682O95780 498 aa15.71■□□□□ 0.11
FXN-203ENST00000396366 CLPTM1O96005 669 aa15.71■□□□□ 0.11
FXN-203ENST00000396366 HPXP02790 462 aa15.71■□□□□ 0.11
FXN-203ENST00000396366 ERCC1P07992 297 aaPredicted RBP15.71■□□□□ 0.11
FXN-203ENST00000396366 MMP7P09237 267 aaPredicted RBP15.71■□□□□ 0.11
FXN-203ENST00000396366 NAT2P11245 290 aa15.71■□□□□ 0.11
FXN-203ENST00000396366 COL8A2P25067 703 aa15.71■□□□□ 0.11
FXN-203ENST00000396366 ZNF84P51523 738 aa15.71■□□□□ 0.11
FXN-203ENST00000396366 SLC7A2P52569 658 aa15.71■□□□□ 0.11
FXN-203ENST00000396366 ZNF133P52736 654 aaPredicted RBP15.71■□□□□ 0.11
FXN-203ENST00000396366 TOP3AQ13472 1001 aaPredicted RBP15.71■□□□□ 0.11
FXN-203ENST00000396366 SLC36A2Q495M3 483 aa15.71■□□□□ 0.11
FXN-203ENST00000396366 ALG10Q5BKT4 473 aa15.71■□□□□ 0.11
FXN-203ENST00000396366 C8orf82Q6P1X6 216 aaPredicted RBP15.71■□□□□ 0.11
FXN-203ENST00000396366 TMEM53Q6P2H8 277 aa15.71■□□□□ 0.11
FXN-203ENST00000396366 PODNL1Q6PEZ8 512 aa15.71■□□□□ 0.11
FXN-203ENST00000396366 TBPL2Q6SJ96 375 aa15.71■□□□□ 0.11
FXN-203ENST00000396366 CPEB3Q8NE35 698 aaKnown RBP15.71■□□□□ 0.11
FXN-203ENST00000396366 OR51A7Q8NH64 312 aa15.71■□□□□ 0.11
FXN-203ENST00000396366 NSMAFQ92636 917 aa15.71■□□□□ 0.11
FXN-203ENST00000396366 TXNIPQ9H3M7 391 aa15.71■□□□□ 0.11
FXN-203ENST00000396366 TMEM160Q9NX00 188 aa15.71■□□□□ 0.11
FXN-203ENST00000396366 SLC7A8Q9UHI5 535 aa15.71■□□□□ 0.11
FXN-203ENST00000396366 FBXL3Q9UKT7 428 aa15.71■□□□□ 0.11
FXN-203ENST00000396366 ZNF346Q9UL40 294 aaKnown RBP15.71■□□□□ 0.11
FXN-203ENST00000396366 HIF3AQ9Y2N7 669 aa15.71■□□□□ 0.11
FXN-203ENST00000396366 TRAV27A0A087WT01 109 aa15.7■□□□□ 0.1
FXN-203ENST00000396366 TGFAP01135 160 aa15.7■□□□□ 0.1
FXN-203ENST00000396366 FAM157CP0CG43 387 aa15.7■□□□□ 0.1
FXN-203ENST00000396366 LSP1P33241 339 aa15.7■□□□□ 0.1
FXN-203ENST00000396366 GSK3BP49841 420 aa15.7■□□□□ 0.1
FXN-203ENST00000396366 FHL1Q13642 323 aa15.7■□□□□ 0.1
FXN-203ENST00000396366 RIN1Q13671 783 aa15.7■□□□□ 0.1
FXN-203ENST00000396366 ELFN2Q5R3F8 820 aa15.7■□□□□ 0.1
FXN-203ENST00000396366 C10orf128Q5T292 105 aa15.7■□□□□ 0.1
FXN-203ENST00000396366 FAM166AQ6J272 317 aa15.7■□□□□ 0.1
FXN-203ENST00000396366 NRMQ8IXM6 262 aa15.7■□□□□ 0.1
FXN-203ENST00000396366 LRRC75AQ8NAA5 344 aa15.7■□□□□ 0.1
FXN-203ENST00000396366 ZNF540Q8NDQ6 660 aa15.7■□□□□ 0.1
FXN-203ENST00000396366 RBM15BQ8NDT2 890 aaKnown RBP15.7■□□□□ 0.1
FXN-203ENST00000396366 LZICQ8WZA0 190 aa15.7■□□□□ 0.1
FXN-203ENST00000396366 NABP1Q96AH0 204 aa15.7■□□□□ 0.1
FXN-203ENST00000396366 TSPAN32Q96QS1 320 aa15.7■□□□□ 0.1
FXN-203ENST00000396366 SNX18Q96RF0 628 aa15.7■□□□□ 0.1
FXN-203ENST00000396366 SHARPINQ9H0F6 387 aa15.7■□□□□ 0.1
FXN-203ENST00000396366 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.69■□□□□ 0.14e-6■■■■□ 20.1
FXN-203ENST00000396366 CENPBD1B2RD01 187 aa15.69■□□□□ 0.1
FXN-203ENST00000396366 GSTA4O15217 222 aa15.69■□□□□ 0.1
FXN-203ENST00000396366 SERPINA1P01009 418 aa15.69■□□□□ 0.1
FXN-203ENST00000396366 IFNA2P01563 188 aa15.69■□□□□ 0.1
FXN-203ENST00000396366 IFNW1P05000 195 aa15.69■□□□□ 0.1
FXN-203ENST00000396366 TACSTD2P09758 323 aa15.69■□□□□ 0.1
FXN-203ENST00000396366 NCK1P16333 377 aa15.69■□□□□ 0.1
FXN-203ENST00000396366 APEX1P27695 318 aaKnown RBP15.69■□□□□ 0.1
FXN-203ENST00000396366 CTXN1P60606 82 aa15.69■□□□□ 0.1
FXN-203ENST00000396366 RPS23P62266 143 aaKnown RBP15.69■□□□□ 0.1
FXN-203ENST00000396366 SGCAQ16586 387 aa15.69■□□□□ 0.1
FXN-203ENST00000396366 PABPC1L2AQ5JQF8 200 aa15.69■□□□□ 0.1
FXN-203ENST00000396366 FAM120AOSQ5T036 256 aa15.69■□□□□ 0.1
FXN-203ENST00000396366 RGS7BPQ6MZT1 257 aaPredicted RBP15.69■□□□□ 0.1
FXN-203ENST00000396366 SLC25A47Q6Q0C1 308 aa15.69■□□□□ 0.1
FXN-203ENST00000396366 CBLL1Q75N03 491 aa15.69■□□□□ 0.1
FXN-203ENST00000396366 TSEN54Q7Z6J9 526 aaKnown RBP15.69■□□□□ 0.1
FXN-203ENST00000396366 ARPINQ7Z6K5 226 aa15.69■□□□□ 0.1
FXN-203ENST00000396366 OFCC1Q8IZS5 231 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms