RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 DEAF1O75398 565 aaPredicted RBP17.37■□□□□ 0.37
SNCA-203ENST00000394986 TP53P04637 393 aaPredicted RBP17.37■□□□□ 0.37
SNCA-203ENST00000394986 CD3EP07766 207 aa17.37■□□□□ 0.37
SNCA-203ENST00000394986 PATE4P0C8F1 98 aa17.37■□□□□ 0.37
SNCA-203ENST00000394986 CD40P25942 277 aa17.37■□□□□ 0.37
SNCA-203ENST00000394986 ZNF84P51523 738 aa17.37■□□□□ 0.37
SNCA-203ENST00000394986 ACTR3P61158 418 aa17.37■□□□□ 0.37
SNCA-203ENST00000394986 PIGFQ07326 219 aa17.37■□□□□ 0.37
SNCA-203ENST00000394986 DBPQ10586 325 aaPredicted RBP17.37■□□□□ 0.37
SNCA-203ENST00000394986 ATP6AP1Q15904 470 aa17.37■□□□□ 0.37
SNCA-203ENST00000394986 GPR139Q6DWJ6 353 aa17.37■□□□□ 0.37
SNCA-203ENST00000394986 KLHL17Q6TDP4 642 aa17.37■□□□□ 0.37
SNCA-203ENST00000394986 SSX8Q7RTT4 187 aa17.37■□□□□ 0.37
SNCA-203ENST00000394986 AMIGO2Q86SJ2 522 aa17.37■□□□□ 0.37
SNCA-203ENST00000394986 MDP1Q86V88 176 aa17.37■□□□□ 0.37
SNCA-203ENST00000394986 MYPOPQ86VE0 399 aaPredicted RBP17.37■□□□□ 0.37
SNCA-203ENST00000394986 SLC22A24Q8N4F4 322 aa17.37■□□□□ 0.37
SNCA-203ENST00000394986 LRTOMTQ8WZ04 291 aa17.37■□□□□ 0.37
SNCA-203ENST00000394986 RBP7Q96R05 134 aa17.37■□□□□ 0.37
SNCA-203ENST00000394986 UBTD1Q9HAC8 227 aa17.37■□□□□ 0.37
SNCA-203ENST00000394986 OBP2BQ9NPH6 170 aa17.37■□□□□ 0.37
SNCA-203ENST00000394986 IGHV1-18A0A0C4DH31 117 aa17.36■□□□□ 0.37
SNCA-203ENST00000394986 PRSS37A4D1T9 235 aa17.36■□□□□ 0.37
SNCA-203ENST00000394986 ARRDC5A6NEK1 342 aa17.36■□□□□ 0.37
SNCA-203ENST00000394986 TXNDC12O95881 172 aa17.36■□□□□ 0.37
SNCA-203ENST00000394986 CELA3BP08861 270 aa17.36■□□□□ 0.37
SNCA-203ENST00000394986 CD79AP11912 226 aa17.36■□□□□ 0.37
SNCA-203ENST00000394986 CDKN2AP42771 156 aaKnown RBP17.36■□□□□ 0.37
SNCA-203ENST00000394986 ETFDHQ16134 617 aa17.36■□□□□ 0.37
SNCA-203ENST00000394986 THEM4Q5T1C6 240 aa17.36■□□□□ 0.37
SNCA-203ENST00000394986 TMEM108Q6UXF1 575 aa17.36■□□□□ 0.37
SNCA-203ENST00000394986 YTHDF3Q7Z739 585 aaKnown RBP17.36■□□□□ 0.37
SNCA-203ENST00000394986 SKA3Q8IX90 412 aa17.36■□□□□ 0.37
SNCA-203ENST00000394986 LILRB1Q8NHL6 650 aaPredicted RBP17.36■□□□□ 0.37
SNCA-203ENST00000394986 FGFBP3Q8TAT2 258 aa17.36■□□□□ 0.37
SNCA-203ENST00000394986 FOXN4Q96NZ1 517 aa17.36■□□□□ 0.37
SNCA-203ENST00000394986 SYT4Q9H2B2 425 aa17.36■□□□□ 0.37
SNCA-203ENST00000394986 DENND2DQ9H6A0 471 aaPredicted RBP17.36■□□□□ 0.37
SNCA-203ENST00000394986 SMURF2Q9HAU4 748 aa17.36■□□□□ 0.37
SNCA-203ENST00000394986 TBC1D23Q9NUY8 699 aa17.36■□□□□ 0.37
SNCA-203ENST00000394986 IL20Q9NYY1 176 aa17.36■□□□□ 0.37
SNCA-203ENST00000394986 NR2C1P13056 603 aa17.35■□□□□ 0.37
SNCA-203ENST00000394986 HOXB1P14653 301 aaPredicted RBP17.35■□□□□ 0.37
SNCA-203ENST00000394986 CTLA4P16410 223 aa17.35■□□□□ 0.37
SNCA-203ENST00000394986 GSTM3P21266 225 aa17.35■□□□□ 0.37
SNCA-203ENST00000394986 FASP25445 335 aa17.35■□□□□ 0.37
SNCA-203ENST00000394986 NPRL3Q12980 569 aa17.35■□□□□ 0.37
SNCA-203ENST00000394986 SLC35F1Q5T1Q4 408 aa17.35■□□□□ 0.37
SNCA-203ENST00000394986 OR52L1Q8NGH7 329 aa17.35■□□□□ 0.37
SNCA-203ENST00000394986 OR4K13Q8NH42 304 aa17.35■□□□□ 0.37
SNCA-203ENST00000394986 NABP1Q96AH0 204 aa17.35■□□□□ 0.37
SNCA-203ENST00000394986 RERGLQ9H628 205 aa17.35■□□□□ 0.37
SNCA-203ENST00000394986 B3GNT2Q9NY97 397 aa17.35■□□□□ 0.37
SNCA-203ENST00000394986 MAST4O15021 2626 aa17.35■□□□□ 0.37
SNCA-203ENST00000394986 PDZD2O15018 2839 aa17.35■□□□□ 0.37
SNCA-203ENST00000394986 A0A1W2PPL8 197 aa17.34■□□□□ 0.37
SNCA-203ENST00000394986 BHLHE40O14503 412 aa17.34■□□□□ 0.37
SNCA-203ENST00000394986 ARPC3O15145 178 aa17.34■□□□□ 0.37
SNCA-203ENST00000394986 OR8G3PP0DMU2 310 aa17.34■□□□□ 0.37
SNCA-203ENST00000394986 APEHP13798 732 aaKnown RBP17.34■□□□□ 0.37
SNCA-203ENST00000394986 HIST1H1CP16403 213 aaKnown RBP17.34■□□□□ 0.37
SNCA-203ENST00000394986 PTAFRP25105 342 aa17.34■□□□□ 0.37
SNCA-203ENST00000394986 IDH3GP51553 393 aaPredicted RBP17.34■□□□□ 0.37
SNCA-203ENST00000394986 RPL13AP3Q6NVV1 102 aa17.34■□□□□ 0.37
SNCA-203ENST00000394986 LEG1Q6P5S2 330 aa17.34■□□□□ 0.37
SNCA-203ENST00000394986 SHQ1Q6PI26 577 aaKnown RBP17.34■□□□□ 0.37
SNCA-203ENST00000394986 ADCK1Q86TW2 530 aa17.34■□□□□ 0.37
SNCA-203ENST00000394986 CDH24Q86UP0 819 aa17.34■□□□□ 0.37
SNCA-203ENST00000394986 LRRC18Q8N456 261 aa17.34■□□□□ 0.37
SNCA-203ENST00000394986 SDR9C7Q8NEX9 313 aa17.34■□□□□ 0.37
SNCA-203ENST00000394986 OR4Q3Q8NH05 313 aa17.34■□□□□ 0.37
SNCA-203ENST00000394986 AKAP1Q92667 903 aaKnown RBP eCLIP17.34■□□□□ 0.37
SNCA-203ENST00000394986 SLC38A2Q96QD8 506 aa17.34■□□□□ 0.37
SNCA-203ENST00000394986 RAB3IPQ96QF0 476 aaPredicted RBP17.34■□□□□ 0.37
SNCA-203ENST00000394986 NMNAT3Q96T66 252 aa17.34■□□□□ 0.37
SNCA-203ENST00000394986 TSSK6Q9BXA6 273 aa17.34■□□□□ 0.37
SNCA-203ENST00000394986 TEX15Q9BXT5 2789 aa17.34■□□□□ 0.37
SNCA-203ENST00000394986 SEMA6AQ9H2E6 1030 aa17.34■□□□□ 0.37
SNCA-203ENST00000394986 VSX1Q9NZR4 365 aaPredicted RBP17.34■□□□□ 0.37
SNCA-203ENST00000394986 PLEKHA6Q9Y2H5 1048 aa17.34■□□□□ 0.37
SNCA-203ENST00000394986 SPG11Q96JI7 2443 aa17.34■□□□□ 0.37
SNCA-203ENST00000394986 SHISA9B4DS77 424 aa17.33■□□□□ 0.36
SNCA-203ENST00000394986 CECR9P0C854 216 aa17.33■□□□□ 0.36
SNCA-203ENST00000394986 CBR1P16152 277 aa17.33■□□□□ 0.36
SNCA-203ENST00000394986 NOS3P29474 1203 aa17.33■□□□□ 0.36
SNCA-203ENST00000394986 GIPRP48546 466 aa17.33■□□□□ 0.36
SNCA-203ENST00000394986 PTDSS1P48651 473 aaKnown RBP17.33■□□□□ 0.36
SNCA-203ENST00000394986 GABPB1Q06547 395 aaPredicted RBP17.33■□□□□ 0.36
SNCA-203ENST00000394986 SGCAQ16586 387 aa17.33■□□□□ 0.36
SNCA-203ENST00000394986 GSG1Q2KHT4 349 aa17.33■□□□□ 0.36
SNCA-203ENST00000394986 SLC36A3Q495N2 470 aa17.33■□□□□ 0.36
SNCA-203ENST00000394986 OTPQ5XKR4 325 aa17.33■□□□□ 0.36
SNCA-203ENST00000394986 CD300LDQ6UXZ3 194 aa17.33■□□□□ 0.36
SNCA-203ENST00000394986 JAZF1Q86VZ6 243 aa17.33■□□□□ 0.36
SNCA-203ENST00000394986 CCDC36Q8IYA8 594 aa17.33■□□□□ 0.36
SNCA-203ENST00000394986 OR5K1Q8NHB7 308 aa17.33■□□□□ 0.36
SNCA-203ENST00000394986 FNDC8Q8TC99 324 aa17.33■□□□□ 0.36
SNCA-203ENST00000394986 NANOS1Q8WY41 292 aaKnown RBP17.33■□□□□ 0.36
SNCA-203ENST00000394986 TSSK2Q96PF2 358 aa17.33■□□□□ 0.36
SNCA-203ENST00000394986 NUAK2Q9H093 628 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms