RNA–Protein interactions for RNA: ENST00000394853.8

PPP3CA-202, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 3,604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-202ENST00000394853 ISYNA1Q9NPH2 558 aa12.65□□□□□ -0.38
PPP3CA-202ENST00000394853 EXOSC3Q9NQT5 275 aaKnown RBP12.65□□□□□ -0.38
PPP3CA-202ENST00000394853 LRFN1Q9P244 771 aa12.65□□□□□ -0.38
PPP3CA-202ENST00000394853 TMED7-TICAM2A0A0A6YYA0 188 aa12.65□□□□□ -0.38
PPP3CA-202ENST00000394853 SAGE2PA6NJ88 616 aa12.65□□□□□ -0.38
PPP3CA-202ENST00000394853 SMAD9O15198 467 aaKnown RBP12.65□□□□□ -0.38
PPP3CA-202ENST00000394853 NKX2-8O15522 239 aa12.65□□□□□ -0.38
PPP3CA-202ENST00000394853 LGALS3BPQ08380 585 aa12.65□□□□□ -0.38
PPP3CA-202ENST00000394853 CBFBQ13951 182 aa12.65□□□□□ -0.38
PPP3CA-202ENST00000394853 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.65□□□□□ -0.38
PPP3CA-202ENST00000394853 SDHCQ99643 169 aaPredicted RBP12.65□□□□□ -0.38
PPP3CA-202ENST00000394853 MIXL1Q9H2W2 232 aa12.65□□□□□ -0.38
PPP3CA-202ENST00000394853 TAS2R10Q9NYW0 307 aa12.65□□□□□ -0.38
PPP3CA-202ENST00000394853 KLHL21Q9UJP4 597 aa12.65□□□□□ -0.38
PPP3CA-202ENST00000394853 POLR1DQ9Y2S0 133 aa12.65□□□□□ -0.38
PPP3CA-202ENST00000394853 TMED7Q9Y3B3 224 aa12.65□□□□□ -0.38
PPP3CA-202ENST00000394853 FABP12A6NFH5 140 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 FADS1O60427 444 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 HPGDSO60760 199 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 OR10A3P58181 314 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 RPS4XP62701 263 aaKnown RBP12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 ARSKQ6UWY0 536 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 SPATC1Q76KD6 591 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 CCDC36Q8IYA8 594 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 ZNF441Q8N8Z8 693 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 OR11G2Q8NGC1 345 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 TSPAN32Q96QS1 320 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 TMEM43Q9BTV4 400 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 SLC19A3Q9BZV2 496 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 TGIF2Q9GZN2 237 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 HIF3AQ9Y2N7 669 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 A0A087WV48 116 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 ASAH2BP0C7U1 165 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 IL11P20809 199 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 NUP62P37198 522 aaPredicted RBP12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 SLC6A8P48029 635 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 P2RX1P51575 399 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 BAK1Q16611 211 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 ODF4Q2M2E3 257 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 ATP1A1-AS1Q5TC04 95 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 SLC6A19Q695T7 634 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 OR5M1Q8NGP8 315 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 WDR77Q9BQA1 342 aaPredicted RBP12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 MFRPQ9BY79 579 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 SLC6A5Q9Y345 797 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 TMEM72A0PK05 275 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 TO15178 435 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 RGS9O75916 674 aaPredicted RBP12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 RNF224P0DH78 156 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 GDF1P27539 372 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 KRR1Q13601 381 aaKnown RBP12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 DDI2Q5TDH0 399 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 TIPARPQ7Z3E1 657 aaKnown RBP12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 PM20D2Q8IYS1 436 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 NFAM1Q8NET5 270 aaPredicted RBP12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 IP6K3Q96PC2 410 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 B4GALT7Q9UBV7 327 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 HRH3Q9Y5N1 445 aa12.64□□□□□ -0.39
PPP3CA-202ENST00000394853 B4DXG7 233 aa12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 C9orf172C9J069 976 aa12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 CD46P15529 392 aa12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 FGF9P31371 208 aaPredicted RBP12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 MESTQ5EB52 335 aa12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 ETFRF1Q6IPR1 90 aa12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 CD200R1LQ6Q8B3 271 aa12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 NR2C2APQ86WQ0 139 aa12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 ADGRG3Q86Y34 549 aa12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 PELI1Q96FA3 418 aa12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 GPR87Q9BY21 358 aa12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 MYOTQ9UBF9 498 aa12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 V9GYH0 126 aa12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 IGLV3-12A0A075B6K2 115 aa12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 VSTM2BA6NLU5 285 aa12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 EDNRAP25101 427 aa12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 CASP6P55212 293 aa12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 GNG2P59768 71 aa12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 MELKQ14680 651 aa12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 PYDC2Q56P42 97 aa12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 OR10G3Q8NGC4 313 aa12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 ABHD4Q8TB40 342 aa12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 SFXN2Q96NB2 322 aa12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 TSPAN10Q9H1Z9 355 aaPredicted RBP12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 CHD8Q9HCK8 2581 aa12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 OR6C70A6NIJ9 312 aa12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 OR6C76A6NM76 312 aa12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 ARPC3O15145 178 aa12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 EIF4E2O60573 245 aaKnown RBP12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 SDHAP31040 664 aa12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 SQSTM1Q13501 440 aa12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 ZNF79Q15937 498 aa12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 ZNF181Q2M3W8 571 aa12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 AGAP7PQ5VUJ5 663 aa12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 TMEM225Q6GV28 225 aa12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 AGAP4Q96P64 663 aa12.63□□□□□ -0.39
PPP3CA-202ENST00000394853 TRBV2A0A0J9YWF9 115 aa12.62□□□□□ -0.39
PPP3CA-202ENST00000394853 TMEM200CA6NKL6 621 aa12.62□□□□□ -0.39
PPP3CA-202ENST00000394853 ID4P47928 161 aa12.62□□□□□ -0.39
PPP3CA-202ENST00000394853 ACSM3Q53FZ2 586 aa12.62□□□□□ -0.39
PPP3CA-202ENST00000394853 FAM122BQ7Z309 247 aa12.62□□□□□ -0.39
PPP3CA-202ENST00000394853 GPALPP1Q8IXQ4 340 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms