RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 RBPJQ06330 500 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 TREML2Q5T2D2 321 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 DTWD1Q8N5C7 304 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 MS4A10Q96PG2 267 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 MAP1LC3CQ9BXW4 147 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 DLL4Q9NR61 685 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 MAGI3Q5TCQ9 1506 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 FAM171A2A8MVW0 826 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 ZNF264O43296 627 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 TBX19O60806 448 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 SDHBP21912 280 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 RGNQ15493 299 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 ZBTB44Q8NCP5 570 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 SERINC2Q96SA4 455 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 DDX31Q9H8H2 851 aaKnown RBP12.45□□□□□ -0.42
USP49-203ENST00000394253 PTPRMP28827 1452 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 TMEM221A6NGB7 291 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 FCGR2AP12318 317 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 CD99P14209 185 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 PHLDA2Q53GA4 152 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 DHRS13Q6UX07 377 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 USP50Q70EL3 339 aaPredicted RBP12.45□□□□□ -0.42
USP49-203ENST00000394253 TUSC5Q8IXB3 177 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 OR4F15Q8NGB8 312 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 SLC7A6Q92536 515 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 FER1L4A9Z1Z3 1794 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 RNGTTO60942 597 aaKnown RBP12.44□□□□□ -0.42
USP49-203ENST00000394253 TMEM123Q8N131 208 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 DTWD2Q8NBA8 298 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 C7orf43Q8WVR3 580 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 SIRT3Q9NTG7 399 aaPredicted RBP12.44□□□□□ -0.42
USP49-203ENST00000394253 FEZF1A0PJY2 475 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 C9orf131Q5VYM1 1079 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 TMEM106AQ96A25 262 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 GPR34Q9UPC5 381 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 MOKQ9UQ07 419 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 SMCHD1A6NHR9 2005 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 DYSFO75923 2080 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 ARPC3O15145 178 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 POU3F2P20265 443 aaPredicted RBP12.44□□□□□ -0.42
USP49-203ENST00000394253 GALR1P47211 349 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 SLC6A11P48066 632 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 TFAP2EQ6VUC0 442 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 TSEN54Q7Z6J9 526 aaKnown RBP12.44□□□□□ -0.42
USP49-203ENST00000394253 OR2T6Q8NHC8 308 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 LHX4Q969G2 390 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 TUBGCP6Q96RT7 1819 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 DEGS1O15121 323 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 OR4Q2P0C623 313 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 Q499Y3 187 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 SDR9C7Q8NEX9 313 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 FBXL18Q96ME1 805 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 ZNF814B7Z6K7 855 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 ZP2Q05996 745 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 GRM2Q14416 872 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 NLGN4XQ8N0W4 816 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 OR5AP2Q8NGF4 316 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 DYNC2LI1Q8TCX1 351 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 SLC39A7Q92504 469 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 SORBS1Q9BX66 1292 aaKnown RBP12.44□□□□□ -0.42
USP49-203ENST00000394253 SEC11CQ9BY50 192 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 SLC6A12P48065 614 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 CD81P60033 236 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 INPP5JQ15735 1006 aaPredicted RBP12.44□□□□□ -0.42
USP49-203ENST00000394253 AMMECR1LQ6DCA0 310 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 OR10X1Q8NGY0 326 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 CCNL2Q96S94 520 aaPredicted RBP12.44□□□□□ -0.42
USP49-203ENST00000394253 GPA33Q99795 319 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 BTNL2Q9UIR0 455 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 LAMP1P11279 417 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 LMO2P25791 158 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 KIR2DL3P43628 341 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 ILKQ13418 452 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 IGSF11Q5DX21 431 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 RABEPKQ7Z6M1 372 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 LRP11Q86VZ4 500 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 OR1L3Q8NH93 324 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 KHSRPQ92945 711 aaKnown RBP eCLIP12.44□□□□□ -0.42
USP49-203ENST00000394253 C1orf74Q96LT6 269 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 AMBRA1Q9C0C7 1298 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 PISDQ9UG56 409 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 RARRES3Q9UL19 164 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 HSD17B6O14756 317 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 SMIM6P0DI80 62 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 DCTP40126 519 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 HSD17B13Q7Z5P4 300 aaPredicted RBP12.44□□□□□ -0.42
USP49-203ENST00000394253 CNEP1R1Q8N9A8 125 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 GPR32P1Q8NGA4 272 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 PINX1Q96BK5 328 aaKnown RBP12.44□□□□□ -0.42
USP49-203ENST00000394253 WDR76Q9H967 626 aa12.44□□□□□ -0.42
USP49-203ENST00000394253 SDR39U1Q9NRG7 319 aaPredicted RBP12.44□□□□□ -0.42
USP49-203ENST00000394253 I6L893 689 aaPredicted RBP12.43□□□□□ -0.42
USP49-203ENST00000394253 PLSCR1O15162 318 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 PRAMEF11O60813 436 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 KCNJ3P48549 501 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 ARG2P78540 354 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 EXT1Q16394 746 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 RNASEKQ6P5S7 137 aaKnown RBP12.43□□□□□ -0.42
USP49-203ENST00000394253 ZNF66Q6ZN08 573 aa12.43□□□□□ -0.42
USP49-203ENST00000394253 A0A1W2PRU2 124 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms