RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 SYS1Q8N2H4 156 aa7.71□□□□□ -1.17
TDP1-203ENST00000393454 TMEM251Q8N6I4 163 aa7.71□□□□□ -1.17
TDP1-203ENST00000393454 YIPF7Q8N8F6 280 aa7.71□□□□□ -1.17
TDP1-203ENST00000393454 TMEM178AQ8NBL3 297 aa7.71□□□□□ -1.17
TDP1-203ENST00000393454 OR2V1Q8NHB1 315 aa7.71□□□□□ -1.17
TDP1-203ENST00000393454 TRMT61AQ96FX7 289 aaKnown RBP7.71□□□□□ -1.17
TDP1-203ENST00000393454 SLC25A44Q96H78 314 aaPredicted RBP7.71□□□□□ -1.17
TDP1-203ENST00000393454 RNF32Q9H0A6 362 aa7.71□□□□□ -1.17
TDP1-203ENST00000393454 ACOXLQ9NUZ1 547 aa7.71□□□□□ -1.17
TDP1-203ENST00000393454 TXNL4BQ9NX01 149 aaKnown RBP7.71□□□□□ -1.17
TDP1-203ENST00000393454 ING1Q9UK53 422 aaPredicted RBP7.71□□□□□ -1.17
TDP1-203ENST00000393454 GSTK1Q9Y2Q3 226 aa7.71□□□□□ -1.17
TDP1-203ENST00000393454 KLHDC2Q9Y2U9 406 aa7.71□□□□□ -1.17
TDP1-203ENST00000393454 SF3B6Q9Y3B4 125 aaKnown RBP7.71□□□□□ -1.17
TDP1-203ENST00000393454 TMEM14AQ9Y6G1 99 aa7.71□□□□□ -1.17
TDP1-203ENST00000393454 SPTBN2O15020 2390 aa7.71□□□□□ -1.18
TDP1-203ENST00000393454 LOC102725191A0A1B0GVB3 256 aa7.71□□□□□ -1.18
TDP1-203ENST00000393454 CENPBD1B2RD01 187 aa7.71□□□□□ -1.18
TDP1-203ENST00000393454 LINC01387J3KSC0 135 aa7.71□□□□□ -1.18
TDP1-203ENST00000393454 TLX3O43711 291 aaPredicted RBP7.71□□□□□ -1.18
TDP1-203ENST00000393454 RPP14O95059 124 aaKnown RBP7.71□□□□□ -1.18
TDP1-203ENST00000393454 VAMP5O95183 116 aa7.71□□□□□ -1.18
TDP1-203ENST00000393454 MPZL1O95297 269 aa7.71□□□□□ -1.18
TDP1-203ENST00000393454 HLA-DPB1P04440 258 aa7.71□□□□□ -1.18
TDP1-203ENST00000393454 KRT8P05787 483 aa7.71□□□□□ -1.18
TDP1-203ENST00000393454 TACSTD2P09758 323 aa7.71□□□□□ -1.18
TDP1-203ENST00000393454 EDNRAP25101 427 aa7.71□□□□□ -1.18
TDP1-203ENST00000393454 SOX6P35712 828 aa7.71□□□□□ -1.18
TDP1-203ENST00000393454 AGFG1P52594 562 aaKnown RBP7.71□□□□□ -1.18
TDP1-203ENST00000393454 GFRA1P56159 465 aa7.71□□□□□ -1.18
TDP1-203ENST00000393454 MXD1Q05195 221 aa7.71□□□□□ -1.18
TDP1-203ENST00000393454 GPR50Q13585 617 aa7.71□□□□□ -1.18
TDP1-203ENST00000393454 THEM4Q5T1C6 240 aa7.71□□□□□ -1.18
TDP1-203ENST00000393454 NHLRC1Q6VVB1 395 aa7.71□□□□□ -1.18
TDP1-203ENST00000393454 SLC22A16Q86VW1 577 aa7.71□□□□□ -1.18
TDP1-203ENST00000393454 NOXO1Q8NFA2 376 aa7.71□□□□□ -1.18
TDP1-203ENST00000393454 OR9K2Q8NGE7 335 aa7.71□□□□□ -1.18
TDP1-203ENST00000393454 OR6X1Q8NH79 312 aa7.71□□□□□ -1.18
TDP1-203ENST00000393454 OR10D3Q8NH80 312 aa7.71□□□□□ -1.18
TDP1-203ENST00000393454 TBC1D15Q8TC07 691 aa7.71□□□□□ -1.18
TDP1-203ENST00000393454 ROBO4Q8WZ75 1007 aa7.71□□□□□ -1.18
TDP1-203ENST00000393454 PELI1Q96FA3 418 aa7.71□□□□□ -1.18
TDP1-203ENST00000393454 KCTD7Q96MP8 289 aa7.71□□□□□ -1.18
TDP1-203ENST00000393454 MNTQ99583 582 aa7.71□□□□□ -1.18
TDP1-203ENST00000393454 SLC6A15Q9H2J7 730 aa7.71□□□□□ -1.18
TDP1-203ENST00000393454 TIGARQ9NQ88 270 aa7.71□□□□□ -1.18
TDP1-203ENST00000393454 MRPL22Q9NWU5 206 aaKnown RBP7.71□□□□□ -1.18
TDP1-203ENST00000393454 GALNT8Q9NY28 637 aa7.71□□□□□ -1.18
TDP1-203ENST00000393454 KCNG2Q9UJ96 466 aa7.71□□□□□ -1.18
TDP1-203ENST00000393454 AKAP13Q12802 2813 aa7.7□□□□□ -1.18
TDP1-203ENST00000393454 KIAA1549Q9HCM3 1950 aa7.7□□□□□ -1.18
TDP1-203ENST00000393454 IGKV1D-43A0A0B4J1Z2 117 aa7.7□□□□□ -1.18
TDP1-203ENST00000393454 TRDV1A0A1B0GX56 115 aa7.7□□□□□ -1.18
TDP1-203ENST00000393454 A0A1W2PPL8 197 aa7.7□□□□□ -1.18
TDP1-203ENST00000393454 METTL15A6NJ78 407 aa7.7□□□□□ -1.18
TDP1-203ENST00000393454 PRR32B1ATL7 298 aa7.7□□□□□ -1.18
TDP1-203ENST00000393454 PHYHO14832 338 aa7.7□□□□□ -1.18
TDP1-203ENST00000393454 DNPH1O43598 174 aa7.7□□□□□ -1.18
TDP1-203ENST00000393454 RGS9O75916 674 aaPredicted RBP7.7□□□□□ -1.18
TDP1-203ENST00000393454 CDRT1O95170 752 aa7.7□□□□□ -1.18
TDP1-203ENST00000393454 OR8G3PP0DMU2 310 aa7.7□□□□□ -1.18
TDP1-203ENST00000393454 ENTPD1P49961 510 aa7.7□□□□□ -1.18
TDP1-203ENST00000393454 TNFSF10P50591 281 aa7.7□□□□□ -1.18
TDP1-203ENST00000393454 CLDN15P56746 228 aa7.7□□□□□ -1.18
TDP1-203ENST00000393454 SIRPAP78324 504 aa7.7□□□□□ -1.18
TDP1-203ENST00000393454 SLC18B1Q6NT16 456 aa7.7□□□□□ -1.18
TDP1-203ENST00000393454 LRRC69Q6ZNQ3 347 aa7.7□□□□□ -1.18
TDP1-203ENST00000393454 CREB3L2Q70SY1 520 aa7.7□□□□□ -1.18
TDP1-203ENST00000393454 GLB1L2Q8IW92 636 aa7.7□□□□□ -1.18
TDP1-203ENST00000393454 OR10H5Q8NGA6 315 aa7.7□□□□□ -1.18
TDP1-203ENST00000393454 OTOSQ8NHW6 89 aa7.7□□□□□ -1.18
TDP1-203ENST00000393454 MCFD2Q8NI22 146 aa7.7□□□□□ -1.18
TDP1-203ENST00000393454 ZNF775Q96BV0 537 aaPredicted RBP7.7□□□□□ -1.18
TDP1-203ENST00000393454 CDADC1Q9BWV3 514 aa7.7□□□□□ -1.18
TDP1-203ENST00000393454 MRPL13Q9BYD1 178 aaKnown RBP7.7□□□□□ -1.18
TDP1-203ENST00000393454 DEFB127Q9H1M4 99 aa7.7□□□□□ -1.18
TDP1-203ENST00000393454 TPK1Q9H3S4 243 aa7.7□□□□□ -1.18
TDP1-203ENST00000393454 LDAHQ9H6V9 325 aa7.7□□□□□ -1.18
TDP1-203ENST00000393454 EXO5Q9H790 373 aa7.7□□□□□ -1.18
TDP1-203ENST00000393454 MARCH7Q9H992 704 aa7.7□□□□□ -1.18
TDP1-203ENST00000393454 SEC61A2Q9H9S3 476 aa7.7□□□□□ -1.18
TDP1-203ENST00000393454 SNTG1Q9NSN8 517 aa7.7□□□□□ -1.18
TDP1-203ENST00000393454 CSAG2Q9Y5P2 127 aa7.7□□□□□ -1.18
TDP1-203ENST00000393454 TRBV2A0A0J9YWF9 115 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 ACOT7O00154 380 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 GABRPO00591 440 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 SMAD9O15198 467 aaKnown RBP7.69□□□□□ -1.18
TDP1-203ENST00000393454 PLPP2O43688 288 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 GLSO94925 669 aaPredicted RBP7.69□□□□□ -1.18
TDP1-203ENST00000393454 PGA4P0DJD7 388 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 PGA3P0DJD8 388 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 ALOX5APP20292 161 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 RPS19P39019 145 aaKnown RBP7.69□□□□□ -1.18
TDP1-203ENST00000393454 GDI2P50395 445 aaKnown RBP7.69□□□□□ -1.18
TDP1-203ENST00000393454 EIF2B1Q14232 305 aaKnown RBP7.69□□□□□ -1.18
TDP1-203ENST00000393454 INSL4Q14641 139 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 SLC10A1Q14973 349 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 RPL22L1Q6P5R6 122 aaKnown RBP7.69□□□□□ -1.18
TDP1-203ENST00000393454 SPATC1Q76KD6 591 aa7.69□□□□□ -1.18
TDP1-203ENST00000393454 KCTD20Q7Z5Y7 419 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms