RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 CDV3Q9UKY7 258 aaKnown RBP17.03■□□□□ 0.32
CBX1-202ENST00000393408 CHURC1-FNTBB4DL54 471 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 B3GALNT1O75752 331 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 AKAIN1P0CW23 69 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 ATXN8OSP0DMR3 200 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 GTF2F2P13984 249 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 FNTBP49356 437 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 ZNF117Q03924 483 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 SLC17A1Q14916 467 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 C2orf76Q3KRA6 126 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 KIAA0895LQ68EN5 471 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 TMUB2Q71RG4 321 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 GALNT11Q8NCW6 608 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 OR2AK2Q8NG84 335 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 LRRC61Q9BV99 259 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 CLEC1BQ9P126 229 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 THADAQ6YHU6 1953 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 MYO9BQ13459 2157 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 MFSD2BA6NFX1 497 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 SLC17A2O00624 439 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 ARPC5O15511 151 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 ZNF35P13682 527 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 EN2P19622 333 aaPredicted RBP17.02■□□□□ 0.32
CBX1-202ENST00000393408 CD1CP29017 333 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 CCKBRP32239 447 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 CAPZBP47756 277 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 CCR5P51681 352 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 OC90Q02509 493 aaPredicted RBP17.02■□□□□ 0.32
CBX1-202ENST00000393408 RAB11BQ15907 218 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 MEP1BQ16820 701 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.02■□□□□ 0.32
CBX1-202ENST00000393408 OTPQ5XKR4 325 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 B3GNTL1Q67FW5 361 aaPredicted RBP17.02■□□□□ 0.32
CBX1-202ENST00000393408 RGS7BPQ6MZT1 257 aaPredicted RBP17.02■□□□□ 0.32
CBX1-202ENST00000393408 MUC20Q8N307 709 aaPredicted RBP17.02■□□□□ 0.32
CBX1-202ENST00000393408 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.02■□□□□ 0.32
CBX1-202ENST00000393408 OR51S1Q8NGJ8 323 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 FAM3DQ96BQ1 224 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 SLC46A1Q96NT5 459 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 ADOQ96SZ5 270 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 PNO1Q9NRX1 252 aaKnown RBP17.02■□□□□ 0.32
CBX1-202ENST00000393408 MED9Q9NWA0 146 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 SDHAF2Q9NX18 166 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 COQ3Q9NZJ6 369 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 PLCL2Q9UPR0 1127 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 KCNMB2Q9Y691 235 aa17.02■□□□□ 0.32
CBX1-202ENST00000393408 CDC40O60508 579 aaKnown RBP eCLIP17.01■□□□□ 0.31
CBX1-202ENST00000393408 NMBP08949 121 aa17.01■□□□□ 0.31
CBX1-202ENST00000393408 FBXO45P0C2W1 286 aa17.01■□□□□ 0.31
CBX1-202ENST00000393408 SLC6A8P48029 635 aa17.01■□□□□ 0.31
CBX1-202ENST00000393408 UBE2MP61081 183 aaKnown RBP17.01■□□□□ 0.31
CBX1-202ENST00000393408 C1QL3Q5VWW1 255 aa17.01■□□□□ 0.31
CBX1-202ENST00000393408 ASPHD2Q6ICH7 369 aa17.01■□□□□ 0.31
CBX1-202ENST00000393408 OR7E24Q6IFN5 339 aa17.01■□□□□ 0.31
CBX1-202ENST00000393408 FAM166AQ6J272 317 aa17.01■□□□□ 0.31
CBX1-202ENST00000393408 PRR22Q8IZ63 422 aa17.01■□□□□ 0.31
CBX1-202ENST00000393408 SLC17A5Q9NRA2 495 aa17.01■□□□□ 0.31
CBX1-202ENST00000393408 LANCL2Q9NS86 450 aa17.01■□□□□ 0.31
CBX1-202ENST00000393408 LOC100289279A0A1B0GTE1 492 aa17.01■□□□□ 0.31
CBX1-202ENST00000393408 MEIS3P1A6NDR6 274 aa17.01■□□□□ 0.31
CBX1-202ENST00000393408 FRG2CA6NGY1 282 aa17.01■□□□□ 0.31
CBX1-202ENST00000393408 F5H5P2 479 aa17.01■□□□□ 0.31
CBX1-202ENST00000393408 GOSR2O14653 212 aa17.01■□□□□ 0.31
CBX1-202ENST00000393408 GMFGO60234 142 aa17.01■□□□□ 0.31
CBX1-202ENST00000393408 ICOSLGO75144 302 aa17.01■□□□□ 0.31
CBX1-202ENST00000393408 RP2O75695 350 aa17.01■□□□□ 0.31
CBX1-202ENST00000393408 PRSS3P35030 304 aa17.01■□□□□ 0.31
CBX1-202ENST00000393408 BAMBIQ13145 260 aa17.01■□□□□ 0.31
CBX1-202ENST00000393408 BIKQ13323 160 aa17.01■□□□□ 0.31
CBX1-202ENST00000393408 PRSS42Q7Z5A4 293 aa17.01■□□□□ 0.31
CBX1-202ENST00000393408 CLEC1AQ8NC01 280 aa17.01■□□□□ 0.31
CBX1-202ENST00000393408 MRPL38Q96DV4 380 aaKnown RBP17.01■□□□□ 0.31
CBX1-202ENST00000393408 DNAJA3Q96EY1 480 aa17.01■□□□□ 0.31
CBX1-202ENST00000393408 CXorf58Q96LI9 332 aa17.01■□□□□ 0.31
CBX1-202ENST00000393408 C1QTNF6Q9BXI9 259 aa17.01■□□□□ 0.31
CBX1-202ENST00000393408 NKX2-4Q9H2Z4 354 aa17.01■□□□□ 0.31
CBX1-202ENST00000393408 MMP17Q9ULZ9 603 aa17.01■□□□□ 0.31
CBX1-202ENST00000393408 B9D1Q9UPM9 204 aa17.01■□□□□ 0.31
CBX1-202ENST00000393408 SLCO1B1Q9Y6L6 691 aa17.01■□□□□ 0.31
CBX1-202ENST00000393408 RANBP2P49792 3224 aaKnown RBP17.01■□□□□ 0.31
CBX1-202ENST00000393408 ALPK2Q86TB3 2170 aa17.01■□□□□ 0.31
CBX1-202ENST00000393408 KNL1Q8NG31 2342 aa17.01■□□□□ 0.31
CBX1-202ENST00000393408 TTLL8A6PVC2 850 aa17■□□□□ 0.31
CBX1-202ENST00000393408 A8MUA0 341 aa17■□□□□ 0.31
CBX1-202ENST00000393408 C11orf98E9PRG8 122 aa17■□□□□ 0.31
CBX1-202ENST00000393408 H0YIG0 161 aa17■□□□□ 0.31
CBX1-202ENST00000393408 XKRYO14609 159 aa17■□□□□ 0.31
CBX1-202ENST00000393408 TPD52L2O43399 206 aaKnown RBP17■□□□□ 0.31
CBX1-202ENST00000393408 PROS1P07225 676 aa17■□□□□ 0.31
CBX1-202ENST00000393408 ZP3P21754 424 aa17■□□□□ 0.31
CBX1-202ENST00000393408 CALCRP30988 508 aa17■□□□□ 0.31
CBX1-202ENST00000393408 RORAP35398 523 aa17■□□□□ 0.31
CBX1-202ENST00000393408 DLX2Q07687 328 aaPredicted RBP17■□□□□ 0.31
CBX1-202ENST00000393408 TOMM34Q15785 309 aaPredicted RBP17■□□□□ 0.31
CBX1-202ENST00000393408 DCAF12L2Q5VW00 463 aa17■□□□□ 0.31
CBX1-202ENST00000393408 SLC35D2Q76EJ3 337 aa17■□□□□ 0.31
CBX1-202ENST00000393408 OR8D2Q9GZM6 311 aa17■□□□□ 0.31
CBX1-202ENST00000393408 APMAPQ9HDC9 416 aa17■□□□□ 0.31
CBX1-202ENST00000393408 SLC22A13Q9Y226 551 aa17■□□□□ 0.31
CBX1-202ENST00000393408 CACNA1CQ13936 2221 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms