RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 ZNF584Q8IVC4 421 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 CDK20Q8IZL9 346 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 FBXL14Q8N1E6 418 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 DEPDC4Q8N2C3 294 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 MUC15Q8N387 334 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 OR9Q2Q8NGE9 314 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 FANK1Q8TC84 345 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 SLC7A6OSQ96CW6 309 aaPredicted RBP6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 FBXO17Q96EF6 278 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 ZNF75AQ96N20 296 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 SMR3AQ99954 134 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 KCNS3Q9BQ31 491 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 TMUB1Q9BVT8 246 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 GSX2Q9BZM3 304 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 OR51B6Q9H340 312 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 IL1RAPQ9NPH3 570 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 CA10Q9NS85 328 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 ZNF701Q9NV72 531 aaPredicted RBP6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 AURKCQ9UQB9 309 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 SIGLEC7Q9Y286 467 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 TMEM5Q9Y2B1 443 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 U3KQV3 271 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 PRRC2AP48634 2157 aaKnown RBP6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 A0A1W2PPL8 197 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 NPIPB13A6NJU9 1138 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 NPIPB4C9JG80 1138 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 H7C1Q1 480 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 TNFRSF11BO00300 401 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 ACOT8O14734 319 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 SMAD7O15105 426 aaKnown RBP6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 GPRIN2O60269 458 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 PTP4A3O75365 173 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 LY6HO94772 140 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 NDUFB2O95178 105 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 RAB36O95755 333 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 GPANK1O95872 356 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 SCG5P05408 212 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 CD14P08571 375 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 IGFBP1P08833 259 aaPredicted RBP6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 OR8G3PP0DMU2 310 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 ZNF14P17017 642 aaPredicted RBP6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 THBS4P35443 961 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 ARR3P36575 388 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 MAGEA2P43356 314 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 ZNF84P51523 738 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 SNTB2Q13425 540 aaKnown RBP6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 KRR1Q13601 381 aaKnown RBP6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 SGCAQ16586 387 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 MSMPQ1L6U9 139 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 C10orf128Q5T292 105 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 AGAP6Q5VW22 663 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 PGBD2Q6P3X8 592 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 SLC25A47Q6Q0C1 308 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 PTCHD4Q6ZW05 846 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 SLC16A14Q7RTX9 510 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 FAM122BQ7Z309 247 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 PIWIL3Q7Z3Z3 882 aaKnown RBP6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 DTX2Q86UW9 622 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 ADGRG5Q8IZF4 528 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 LRRC75A-AS1Q8N1F1 130 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 ARHGAP24Q8N264 748 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 PAQR4Q8N4S7 273 aaPredicted RBP6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 ARIH2OSQ8N7S6 290 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 MAPK1IP1LQ8NDC0 245 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 OR4C15Q8NGM1 316 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 NANOS1Q8WY41 292 aaKnown RBP6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 NABP1Q96AH0 204 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 ASB9Q96DX5 294 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 SAMD8Q96LT4 415 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 LRGUKQ96M69 825 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 ZNF570Q96NI8 536 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 BTBD10Q9BSF8 475 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 ALG12Q9BV10 488 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 C1orf21Q9H246 121 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 GSX1Q9H4S2 264 aaPredicted RBP6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 RERGLQ9H628 205 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 DENND2DQ9H6A0 471 aaPredicted RBP6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 EGLN3Q9H6Z9 239 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 RNF121Q9H920 327 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 EMC7Q9NPA0 242 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 CBLN4Q9NTU7 201 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 FAIMQ9NVQ4 179 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 GRHPRQ9UBQ7 328 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 TMCC3Q9ULS5 477 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 FZR1Q9UM11 496 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 IER3IP1Q9Y5U9 82 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 LYVE1Q9Y5Y7 322 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 ITPR3Q14573 2671 aa6.64□□□□□ -1.35
HMGB3P1-201ENST00000393368 SLC22A23A1A5C7 686 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 HTR3EA5X5Y0 456 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 CENPBD1B2RD01 187 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 UBL3O95164 117 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 MPZL1O95297 269 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 FARS2O95363 451 aaKnown RBP6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 MMP7P09237 267 aaPredicted RBP6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 OR4A8P0C604 315 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 FAM157BP0CG42 384 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 PAX1P15863 534 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 CTLA4P16410 223 aa6.63□□□□□ -1.35
HMGB3P1-201ENST00000393368 ZNF32P17041 273 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms