RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 SHC4Q6S5L8 630 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 SLC30A8Q8IWU4 369 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 GPALPP1Q8IXQ4 340 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 TMEM251Q8N6I4 163 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 ACBD4Q8NC06 268 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 OR13A1Q8NGR1 328 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 OR5AK3PQ8NH89 298 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 PYROXD1Q8WU10 500 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 TEPSINQ96N21 525 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 OPALINQ96PE5 141 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 TSSK3Q96PN8 268 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 RIOK2Q9BVS4 552 aaKnown RBP3.12□□□□□ -1.91
XRN1-202ENST00000392981 TIPINQ9BVW5 301 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 RDH14Q9HBH5 336 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 ASCL3Q9NQ33 180 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 EPRSP07814 1512 aaKnown RBP3.12□□□□□ -1.91
XRN1-202ENST00000392981 NSG1A0A0A6YYJ2 146 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 CENPVL1A0A0U1RR11 272 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 RBMY1BA6NDE4 496 aaKnown RBP3.12□□□□□ -1.91
XRN1-202ENST00000392981 RBMY1EA6NEQ0 496 aaKnown RBP3.12□□□□□ -1.91
XRN1-202ENST00000392981 MIF4GDA9UHW6 222 aaKnown RBP3.12□□□□□ -1.91
XRN1-202ENST00000392981 IGF1P05019 195 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 RBMY1DP0C7P1 496 aaKnown RBP3.12□□□□□ -1.91
XRN1-202ENST00000392981 RBMY1A1P0DJD3 496 aaKnown RBP3.12□□□□□ -1.91
XRN1-202ENST00000392981 HOXA9P31269 272 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 QARSP47897 775 aaKnown RBP3.12□□□□□ -1.91
XRN1-202ENST00000392981 MAGOHP61326 146 aaKnown RBP3.12□□□□□ -1.91
XRN1-202ENST00000392981 HMGCS1Q01581 520 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 RELAQ04206 551 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 SMCO1Q147U7 214 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 SLC17A1Q14916 467 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 MAD2L1BPQ15013 274 aaPredicted RBP3.12□□□□□ -1.91
XRN1-202ENST00000392981 GUK1Q16774 197 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 GOLGA7BQ2TAP0 167 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 UNQ6126/PRO20091Q6UXV3 157 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 FAM122BQ7Z309 247 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 PTAR1Q7Z6K3 402 aaPredicted RBP3.12□□□□□ -1.91
XRN1-202ENST00000392981 LINC01561Q8N1V8 128 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 PGBD5Q8N414 524 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 LNX2Q8N448 690 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 TPRX1Q8N7U7 411 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 ZNF680Q8NEM1 530 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 GRPEL2Q8TAA5 225 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 FNDC8Q8TC99 324 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 SMARCD2Q92925 531 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 NEIL2Q969S2 332 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 RITA1Q96K30 269 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 DCTN5Q9BTE1 182 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 ENY2Q9NPA8 101 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 CCDC59Q9P031 241 aaKnown RBP3.12□□□□□ -1.91
XRN1-202ENST00000392981 SLC17A4Q9Y2C5 497 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 POLDIP2Q9Y2S7 368 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 RPL36Q9Y3U8 105 aaKnown RBP3.12□□□□□ -1.91
XRN1-202ENST00000392981 CACNG2Q9Y698 323 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 ATP10AO60312 1499 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 CELSR3Q9NYQ7 3312 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 BSNQ9UPA5 3926 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 GLYATL1P3A0A0U1RQE8 302 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 RNF222A6NCQ9 220 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 FAM228BP0C875 321 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 SLC2A1P11166 492 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 ADORA1P30542 326 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 CALCRP30988 508 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 HOXA6P31267 233 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 PGGT1BP53609 377 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 ELLP55199 621 aaPredicted RBP3.12□□□□□ -1.91
XRN1-202ENST00000392981 XGP55808 180 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 MESP2Q0VG99 397 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 CDC20Q12834 499 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 EIPR1Q53HC9 387 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 SAMD12Q8N8I0 201 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 LGALS14Q8TCE9 139 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 SAP25Q8TEE9 199 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 CMTM7Q96FZ5 175 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 MS4A4EQ96PG1 132 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 P2RY13Q9BPV8 354 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 KIFC1Q9BW19 673 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 TMEM181Q9P2C4 612 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 COL24A1Q17RW2 1714 aa3.12□□□□□ -1.91
XRN1-202ENST00000392981 C2orf74A8MZ97 194 aa3.11□□□□□ -1.91
XRN1-202ENST00000392981 DCTN6O00399 190 aa3.11□□□□□ -1.91
XRN1-202ENST00000392981 CATP04040 527 aaKnown RBP3.11□□□□□ -1.91
XRN1-202ENST00000392981 RLN2P04090 185 aa3.11□□□□□ -1.91
XRN1-202ENST00000392981 ZNF250P15622 560 aa3.11□□□□□ -1.91
XRN1-202ENST00000392981 SHMT2P34897 504 aa3.11□□□□□ -1.91
XRN1-202ENST00000392981 BIDP55957 195 aa3.11□□□□□ -1.91
XRN1-202ENST00000392981 FBXW4P57775 412 aa3.11□□□□□ -1.91
XRN1-202ENST00000392981 ZNF528Q3MIS6 628 aa3.11□□□□□ -1.91
XRN1-202ENST00000392981 FAM106AQ4KMX7 169 aa3.11□□□□□ -1.91
XRN1-202ENST00000392981 TPTE2P1Q5T6R2 138 aa3.11□□□□□ -1.91
XRN1-202ENST00000392981 STUMQ69YW2 141 aa3.11□□□□□ -1.91
XRN1-202ENST00000392981 COLCA1Q6ZS62 124 aa3.11□□□□□ -1.91
XRN1-202ENST00000392981 NUFIP2Q7Z417 695 aaKnown RBP3.11□□□□□ -1.91
XRN1-202ENST00000392981 SLC47A2Q86VL8 602 aa3.11□□□□□ -1.91
XRN1-202ENST00000392981 OR10V1Q8NGI7 309 aa3.11□□□□□ -1.91
XRN1-202ENST00000392981 PHOSPHO2Q8TCD6 241 aa3.11□□□□□ -1.91
XRN1-202ENST00000392981 CD101Q93033 1021 aa3.11□□□□□ -1.91
XRN1-202ENST00000392981 TOP1MTQ969P6 601 aa3.11□□□□□ -1.91
XRN1-202ENST00000392981 VAT1Q99536 393 aa3.11□□□□□ -1.91
XRN1-202ENST00000392981 ARL6Q9H0F7 186 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms