RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 C2CD4CQ8TF44 421 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 PIGKQ92643 395 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 TSLPQ969D9 159 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 RHOVQ96L33 236 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 NMNAT2Q9BZQ4 307 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 TCF7L1Q9HCS4 588 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 MMP25Q9NPA2 562 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 MCUBQ9NWR8 336 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 KLHL9Q9P2J3 617 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 DHCR7Q9UBM7 475 aaKnown RBP8.75□□□□□ -1.01
COL6A3-204ENST00000392003 COL4A2P08572 1712 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 TRIOO75962 3097 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 IGKV1D-42A0A075B6H8 117 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 LGALS8O00214 317 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 OIP5O43482 229 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 CD3GP09693 182 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 GP1BBP13224 206 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 CBR1P16152 277 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 SRMP19623 302 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 PGCP20142 388 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 LCN1P31025 176 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 NR0B1P51843 470 aaKnown RBP8.75□□□□□ -1.01
COL6A3-204ENST00000392003 NSDHLQ15738 373 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 SWI5Q1ZZU3 235 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 EMC4Q5J8M3 183 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 LYSMD4Q5XG99 296 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 RAB33BQ9H082 229 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 NIPAL2Q9H841 368 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 PRMT8Q9NR22 394 aaPredicted RBP8.75□□□□□ -1.01
COL6A3-204ENST00000392003 LANCL2Q9NS86 450 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 AUP1Q9Y679 476 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 TMEM72A0PK05 275 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 LANCL1O43813 399 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 SLC6A1P30531 599 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 PLCXD2Q0VAA5 305 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 ARHGAP40Q5TG30 622 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 C1orf189Q5VU69 101 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 DPPA2Q7Z7J5 298 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 ZNF321PQ8N8H1 164 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 OR6N2Q8NGY6 317 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 LGALS14Q8TCE9 139 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 ZPLD1Q8TCW7 415 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 LPAR4Q99677 370 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 C7orf50Q9BRJ6 194 aaKnown RBP8.75□□□□□ -1.01
COL6A3-204ENST00000392003 MFRPQ9BY79 579 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 PARD6GQ9BYG4 376 aaPredicted RBP8.75□□□□□ -1.01
COL6A3-204ENST00000392003 SHARPINQ9H0F6 387 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 GALNT9Q9HCQ5 603 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 PRDM6Q9NQX0 595 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 NUBP2Q9Y5Y2 271 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 TMEM14AQ9Y6G1 99 aa8.75□□□□□ -1.01
COL6A3-204ENST00000392003 ACOD1A6NK06 481 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 SMPD2O60906 423 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 OR6A2O95222 327 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 LDOC1O95751 146 aaPredicted RBP8.74□□□□□ -1.01
COL6A3-204ENST00000392003 FAM157BP0CG42 384 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 OR8G3PP0DMU2 310 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 RAB13P51153 203 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 MMP15P51511 669 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 RPL18Q07020 188 aaKnown RBP8.74□□□□□ -1.01
COL6A3-204ENST00000392003 SSX2Q16385 188 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 UBE2NLQ5JXB2 153 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 BCL2L15Q5TBC7 163 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 LYPD4Q6UWN0 246 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 LINGO2Q7L985 606 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 CLRN3Q8NCR9 226 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 OR5AK2Q8NH90 309 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.74□□□□□ -1.01
COL6A3-204ENST00000392003 LIPHQ8WWY8 451 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 TSSK2Q96PF2 358 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 CACNG6Q9BXT2 260 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 COMMD4Q9H0A8 199 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 FKRPQ9H9S5 495 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 NUDT15Q9NV35 164 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 CACNA1IQ9P0X4 2223 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 TMEM131Q92545 1883 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 A0A1W2PPC1 479 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 LOC390937A0A1W2PQ73 354 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 SLC22A23A1A5C7 686 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 KHNYNO15037 678 aaKnown RBP8.74□□□□□ -1.01
COL6A3-204ENST00000392003 ICOSLGO75144 302 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 HLA-DQA2P01906 255 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 C1QBP02746 253 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 CLPSP04118 112 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 GNALP38405 381 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 ZP2Q05996 745 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 FNDC7Q5VTL7 733 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 SLC22A10Q63ZE4 541 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 OGFOD3Q6PK18 319 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 UNQ9370/PRO34162Q6UXP9 181 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 LUZP2Q86TE4 346 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 ZNRF4Q8WWF5 429 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 DDOQ99489 341 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 MRI1Q9BV20 369 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 SLC25A18Q9H1K4 315 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 V9GY05 133 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 HEATR5AQ86XA9 2040 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 CDC14CA4D256 554 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 STOMP27105 288 aa8.74□□□□□ -1.01
COL6A3-204ENST00000392003 SNTB2Q13425 540 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms