RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 CAMKMTQ7Z624 323 aa15.54■□□□□ 0.08
TRAF3IP1-202ENST00000391993 SGK3Q96BR1 496 aa15.54■□□□□ 0.08
TRAF3IP1-202ENST00000391993 C5orf34Q96MH7 638 aa15.54■□□□□ 0.08
TRAF3IP1-202ENST00000391993 SLC22A13Q9Y226 551 aa15.54■□□□□ 0.08
TRAF3IP1-202ENST00000391993 PRAMEF27A3QJZ7 478 aa15.54■□□□□ 0.08
TRAF3IP1-202ENST00000391993 BTBD17A6NE02 478 aa15.54■□□□□ 0.08
TRAF3IP1-202ENST00000391993 OR5K4A6NMS3 321 aa15.54■□□□□ 0.08
TRAF3IP1-202ENST00000391993 HCKP08631 526 aa15.54■□□□□ 0.08
TRAF3IP1-202ENST00000391993 TIMP2P16035 220 aa15.54■□□□□ 0.08
TRAF3IP1-202ENST00000391993 SERPINA2P20848 420 aa15.54■□□□□ 0.08
TRAF3IP1-202ENST00000391993 SRSF3P84103 164 aaKnown RBP15.54■□□□□ 0.08
TRAF3IP1-202ENST00000391993 TMEM104Q8NE00 496 aa15.54■□□□□ 0.08
TRAF3IP1-202ENST00000391993 MIB2Q96AX9 1013 aa15.54■□□□□ 0.08
TRAF3IP1-202ENST00000391993 ZNF514Q96K75 400 aaPredicted RBP15.54■□□□□ 0.08
TRAF3IP1-202ENST00000391993 OR2M4Q96R27 311 aa15.54■□□□□ 0.08
TRAF3IP1-202ENST00000391993 SOSTQ9BQB4 213 aa15.54■□□□□ 0.08
TRAF3IP1-202ENST00000391993 CNTNAP3Q9BZ76 1288 aa15.54■□□□□ 0.08
TRAF3IP1-202ENST00000391993 PPP4R1LQ9P1A2 415 aa15.54■□□□□ 0.08
TRAF3IP1-202ENST00000391993 B3GALT1Q9Y5Z6 326 aa15.54■□□□□ 0.08
TRAF3IP1-202ENST00000391993 DNAH12Q6ZR08 3092 aa15.54■□□□□ 0.08
TRAF3IP1-202ENST00000391993 HOXB9P17482 250 aaPredicted RBP15.54■□□□□ 0.08
TRAF3IP1-202ENST00000391993 CASP6P55212 293 aa15.54■□□□□ 0.08
TRAF3IP1-202ENST00000391993 UBE2KP61086 200 aa15.54■□□□□ 0.08
TRAF3IP1-202ENST00000391993 ZNF805Q5CZA5 627 aa15.54■□□□□ 0.08
TRAF3IP1-202ENST00000391993 PPP1R14AQ96A00 147 aa15.54■□□□□ 0.08
TRAF3IP1-202ENST00000391993 SEC61A2Q9H9S3 476 aa15.54■□□□□ 0.08
TRAF3IP1-202ENST00000391993 CXorf65A6NEN9 183 aa15.53■□□□□ 0.08
TRAF3IP1-202ENST00000391993 CPN1P15169 458 aa15.53■□□□□ 0.08
TRAF3IP1-202ENST00000391993 RIPPLY1Q0D2K3 151 aa15.53■□□□□ 0.08
TRAF3IP1-202ENST00000391993 PJVKQ0ZLH3 352 aa15.53■□□□□ 0.08
TRAF3IP1-202ENST00000391993 IRF4Q15306 451 aa15.53■□□□□ 0.08
TRAF3IP1-202ENST00000391993 DCST2Q5T1A1 773 aa15.53■□□□□ 0.08
TRAF3IP1-202ENST00000391993 ARMC6Q6NXE6 501 aa15.53■□□□□ 0.08
TRAF3IP1-202ENST00000391993 CMBLQ96DG6 245 aa15.53■□□□□ 0.08
TRAF3IP1-202ENST00000391993 SIRT3Q9NTG7 399 aaPredicted RBP15.53■□□□□ 0.08
TRAF3IP1-202ENST00000391993 SMCO3A2RU48 225 aa15.53■□□□□ 0.08
TRAF3IP1-202ENST00000391993 GPANK1O95872 356 aa15.53■□□□□ 0.08
TRAF3IP1-202ENST00000391993 RPA2P15927 270 aa15.53■□□□□ 0.08
TRAF3IP1-202ENST00000391993 LAP3P28838 519 aa15.53■□□□□ 0.08
TRAF3IP1-202ENST00000391993 BSGP35613 385 aa15.53■□□□□ 0.08
TRAF3IP1-202ENST00000391993 EFNB2P52799 333 aa15.53■□□□□ 0.08
TRAF3IP1-202ENST00000391993 PPP1R1AQ13522 171 aa15.53■□□□□ 0.08
TRAF3IP1-202ENST00000391993 DND1Q8IYX4 353 aaKnown RBP15.53■□□□□ 0.08
TRAF3IP1-202ENST00000391993 CAMKVQ8NCB2 501 aa15.53■□□□□ 0.08
TRAF3IP1-202ENST00000391993 OR10AC1Q8NH08 325 aa15.53■□□□□ 0.08
TRAF3IP1-202ENST00000391993 MARCH1Q8TCQ1 289 aa15.53■□□□□ 0.08
TRAF3IP1-202ENST00000391993 MITD1Q8WV92 249 aa15.53■□□□□ 0.08
TRAF3IP1-202ENST00000391993 PRRT1Q99946 306 aa15.53■□□□□ 0.08
TRAF3IP1-202ENST00000391993 ADGRL4Q9HBW9 690 aa15.53■□□□□ 0.08
TRAF3IP1-202ENST00000391993 SIPA1L1O43166 1804 aa15.53■□□□□ 0.08
TRAF3IP1-202ENST00000391993 GREB1LQ9C091 1923 aaPredicted RBP15.53■□□□□ 0.08
TRAF3IP1-202ENST00000391993 ALOX12BO75342 701 aa15.53■□□□□ 0.08
TRAF3IP1-202ENST00000391993 RHOP08100 348 aa15.53■□□□□ 0.08
TRAF3IP1-202ENST00000391993 CD300LGQ6UXG3 332 aa15.53■□□□□ 0.08
TRAF3IP1-202ENST00000391993 STEAP1Q9UHE8 339 aa15.53■□□□□ 0.08
TRAF3IP1-202ENST00000391993 GALR3O60755 368 aaPredicted RBP15.52■□□□□ 0.08
TRAF3IP1-202ENST00000391993 ITGA5P08648 1049 aa15.52■□□□□ 0.08
TRAF3IP1-202ENST00000391993 HOXB3P14651 431 aaPredicted RBP15.52■□□□□ 0.08
TRAF3IP1-202ENST00000391993 THBS2P35442 1172 aa15.52■□□□□ 0.08
TRAF3IP1-202ENST00000391993 CAV2P51636 162 aa15.52■□□□□ 0.08
TRAF3IP1-202ENST00000391993 SHC2P98077 582 aa15.52■□□□□ 0.08
TRAF3IP1-202ENST00000391993 ABCA11PQ4W5N1 156 aa15.52■□□□□ 0.08
TRAF3IP1-202ENST00000391993 KLHL24Q6TFL4 600 aa15.52■□□□□ 0.08
TRAF3IP1-202ENST00000391993 DMRTA2Q96SC8 542 aa15.52■□□□□ 0.08
TRAF3IP1-202ENST00000391993 RAB33BQ9H082 229 aa15.52■□□□□ 0.08
TRAF3IP1-202ENST00000391993 FBXO34Q9NWN3 711 aa15.52■□□□□ 0.08
TRAF3IP1-202ENST00000391993 ANKRD31Q8N7Z5 1873 aa15.52■□□□□ 0.08
TRAF3IP1-202ENST00000391993 OTOFQ9HC10 1997 aa15.52■□□□□ 0.08
TRAF3IP1-202ENST00000391993 UNC13CQ8NB66 2214 aa15.52■□□□□ 0.08
TRAF3IP1-202ENST00000391993 SDCBPO00560 298 aaPredicted RBP15.52■□□□□ 0.08
TRAF3IP1-202ENST00000391993 HOXA2O43364 376 aa15.52■□□□□ 0.08
TRAF3IP1-202ENST00000391993 AGR2O95994 175 aa15.52■□□□□ 0.08
TRAF3IP1-202ENST00000391993 TAGLN2P37802 199 aaKnown RBP15.52■□□□□ 0.08
TRAF3IP1-202ENST00000391993 IDH3GP51553 393 aaPredicted RBP15.52■□□□□ 0.08
TRAF3IP1-202ENST00000391993 BDH1Q02338 343 aa15.52■□□□□ 0.08
TRAF3IP1-202ENST00000391993 TANGO2Q6ICL3 276 aa15.52■□□□□ 0.08
TRAF3IP1-202ENST00000391993 GALNT16Q8N428 558 aa15.52■□□□□ 0.08
TRAF3IP1-202ENST00000391993 ZNF248Q8NDW4 579 aa15.52■□□□□ 0.08
TRAF3IP1-202ENST00000391993 ABT1Q9ULW3 272 aaKnown RBP15.52■□□□□ 0.08
TRAF3IP1-202ENST00000391993 PCYT1BQ9Y5K3 369 aaPredicted RBP15.52■□□□□ 0.08
TRAF3IP1-202ENST00000391993 LTBP4Q8N2S1 1624 aa15.52■□□□□ 0.07
TRAF3IP1-202ENST00000391993 K7EPK0 472 aa15.52■□□□□ 0.07
TRAF3IP1-202ENST00000391993 NDUFA2O43678 99 aa15.52■□□□□ 0.07
TRAF3IP1-202ENST00000391993 SOX15O60248 233 aa15.52■□□□□ 0.07
TRAF3IP1-202ENST00000391993 ADAM11O75078 769 aa15.52■□□□□ 0.07
TRAF3IP1-202ENST00000391993 ADAP1O75689 374 aa15.52■□□□□ 0.07
TRAF3IP1-202ENST00000391993 IGHA1P01876 353 aa15.52■□□□□ 0.07
TRAF3IP1-202ENST00000391993 C8AP07357 584 aa15.52■□□□□ 0.07
TRAF3IP1-202ENST00000391993 ZNF888P0CJ79 500 aaPredicted RBP15.52■□□□□ 0.07
TRAF3IP1-202ENST00000391993 AWAT1Q58HT5 328 aa15.52■□□□□ 0.07
TRAF3IP1-202ENST00000391993 FAM71E2Q8N5Q1 922 aa15.52■□□□□ 0.07
TRAF3IP1-202ENST00000391993 KIRREL1Q96J84 757 aa15.52■□□□□ 0.07
TRAF3IP1-202ENST00000391993 SRMSQ9H3Y6 488 aa15.52■□□□□ 0.07
TRAF3IP1-202ENST00000391993 STARD5Q9NSY2 213 aa15.52■□□□□ 0.07
TRAF3IP1-202ENST00000391993 EXOGQ9Y2C4 368 aaKnown RBP15.52■□□□□ 0.07
TRAF3IP1-202ENST00000391993 A0A087X0M5 115 aa15.52■□□□□ 0.07
TRAF3IP1-202ENST00000391993 BORCS7-ASMTA0A0B4J1R7 106 aa15.52■□□□□ 0.07
TRAF3IP1-202ENST00000391993 TRAV1-2A0A0B4J238 106 aa15.52■□□□□ 0.07
TRAF3IP1-202ENST00000391993 A0A1B0GX30 115 aa15.52■□□□□ 0.07
TRAF3IP1-202ENST00000391993 H7C417 338 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms