RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 INAQ16352 499 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 SNRNP35Q16560 246 aaKnown RBP0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 GGTA1PQ4G0N0 100 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 ORMDL2Q53FV1 153 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 CARD16Q5EG05 197 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 CCNJQ5T5M9 372 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 ARL9Q6T311 187 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 LINC00173Q6ZV60 143 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 NCCRP1Q6ZVX7 275 aaPredicted RBP0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 LHFPL3Q86UP9 236 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 GRAMD2AQ8IUY3 354 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 CDKL3Q8IVW4 592 aaPredicted RBP0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 VSTM4Q8IW00 320 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 TMEM105Q8N8V8 129 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 ST20-AS1Q8NBB2 130 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 GMCL1P1Q8NEA9 526 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 OR4K5Q8NGD3 323 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 OR5M1Q8NGP8 315 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 OR10T2Q8NGX3 314 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 OR2G2Q8NGZ5 317 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 CMTM2Q8TAZ6 248 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 CCDC110Q8TBZ0 833 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 TRMT10AQ8TBZ6 339 aaKnown RBP0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 C15orf40Q8WUR7 153 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 FAM3CQ92520 227 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 FAM3DQ96BQ1 224 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 FLYWCH2Q96CP2 140 aaKnown RBP0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 MED8Q96G25 268 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 CNDP1Q96KN2 507 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 SORT1Q99523 831 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 P2RX4Q99571 388 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 SHANK2-AS3Q9BTD1 123 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 KRTAP4-1Q9BYQ7 146 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 MRPL37Q9BZE1 423 aaKnown RBP0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 MFFQ9GZY8 342 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 UBE2ZQ9H832 354 aaPredicted RBP0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 ELOVL3Q9HB03 270 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 LY9Q9HBG7 655 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 LAMP5Q9UJQ1 280 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 KCNIP3Q9Y2W7 256 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 SIGLEC9Q9Y336 463 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 CBY1Q9Y3M2 126 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 U3KQV3 271 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 SF3B1O75533 1304 aaKnown RBP eCLIP0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 CEMIPQ8WUJ3 1361 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 RPAP1Q9BWH6 1393 aaPredicted RBP0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 GPATCH8Q9UKJ3 1502 aaKnown RBP0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 SHANK1Q9Y566 2161 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 MUC6Q6W4X9 2439 aa0.52□□□□□ -2.33
SNORD28B-201ENST00000390993 IGHV3OR16-8A0A075B7F1 116 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 TRAV19A0A0A6YYK7 116 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 IGHV1OR15-9A0A0B4J2B8 117 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 TMEM120BA0PK00 339 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 KRT87PA6NCN2 255 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 TRIM64A6NGJ6 449 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 TRIM64BA6NI03 449 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 HIDE1A8MVS5 230 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 SPECC1L-ADORA2AF8WAN1 911 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 F8WDY8 70 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 BTN3A3O00478 584 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 CHADO15335 359 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 SOX15O60248 233 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 CDC40O60508 579 aaKnown RBP eCLIP0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 IDH1O75874 414 aaKnown RBP0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 HLA-DQB1P01920 261 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 FGF1P05230 155 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 FUT1P19526 365 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 F2RP25116 425 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 PSMB5P28074 263 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 CCR1P32246 355 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 SSTR5P35346 364 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 SERPINB5P36952 375 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 TGFBR2P37173 567 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 AQP2P41181 271 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 EPS15P42566 896 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 VSX2P58304 361 aaPredicted RBP0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 STARD6P59095 220 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 RPS14P62263 151 aaKnown RBP0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 ZNF235Q14590 738 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 PGGHGQ32M88 737 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 KRTAP21-3Q3LHN1 58 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 ZFAND6Q6FIF0 208 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 HCP5Q6MZN7 132 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 PLBD1Q6P4A8 553 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 SMARCD3Q6STE5 483 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 TEX43Q6ZNM6 134 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 CCDC73Q6ZRK6 1079 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 LINC00336Q6ZUF6 198 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 ADAMTS13Q76LX8 1427 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 ASCL5Q7RTU5 278 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 NT5DC3Q86UY8 548 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 ECHDC2Q86YB7 292 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 SLC38A6Q8IZM9 456 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 TMEM256Q8N2U0 113 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 STPG2Q8N412 459 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 ZNF557Q8N988 423 aaPredicted RBP0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 FADS6Q8N9I5 356 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 DOCK8Q8NF50 2099 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 OR52H1Q8NGJ2 320 aa0.51□□□□□ -2.33
SNORD28B-201ENST00000390993 OR4D5Q8NGN0 318 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms