RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 MESTQ5EB52 335 aa13.12□□□□□ -0.31
IGHV3-53-201ENST00000390627 ADAM5Q6NVV9 412 aa13.12□□□□□ -0.31
IGHV3-53-201ENST00000390627 SLC25A47Q6Q0C1 308 aa13.12□□□□□ -0.31
IGHV3-53-201ENST00000390627 C20orf204Q6ZNR8 217 aa13.12□□□□□ -0.31
IGHV3-53-201ENST00000390627 YTHDF3Q7Z739 585 aaKnown RBP13.12□□□□□ -0.31
IGHV3-53-201ENST00000390627 DPPA2Q7Z7J5 298 aa13.12□□□□□ -0.31
IGHV3-53-201ENST00000390627 DEPDC4Q8N2C3 294 aa13.12□□□□□ -0.31
IGHV3-53-201ENST00000390627 SLC22A24Q8N4F4 322 aa13.12□□□□□ -0.31
IGHV3-53-201ENST00000390627 NSMAFQ92636 917 aa13.12□□□□□ -0.31
IGHV3-53-201ENST00000390627 NRGNQ92686 78 aa13.12□□□□□ -0.31
IGHV3-53-201ENST00000390627 DUS3LQ96G46 650 aaKnown RBP13.12□□□□□ -0.31
IGHV3-53-201ENST00000390627 SAMD8Q96LT4 415 aa13.12□□□□□ -0.31
IGHV3-53-201ENST00000390627 ERMAPQ96PL5 475 aaPredicted RBP13.12□□□□□ -0.31
IGHV3-53-201ENST00000390627 SLC38A2Q96QD8 506 aa13.12□□□□□ -0.31
IGHV3-53-201ENST00000390627 RAB3IPQ96QF0 476 aaPredicted RBP13.12□□□□□ -0.31
IGHV3-53-201ENST00000390627 KCNS3Q9BQ31 491 aa13.12□□□□□ -0.31
IGHV3-53-201ENST00000390627 DENND2DQ9H6A0 471 aaPredicted RBP13.12□□□□□ -0.31
IGHV3-53-201ENST00000390627 PDP1Q9P0J1 537 aaPredicted RBP13.12□□□□□ -0.31
IGHV3-53-201ENST00000390627 ST6GALNAC2Q9UJ37 374 aa13.12□□□□□ -0.31
IGHV3-53-201ENST00000390627 AP4S1Q9Y587 144 aa13.12□□□□□ -0.31
IGHV3-53-201ENST00000390627 IGKV1D-43A0A0B4J1Z2 117 aa13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 IGHV1-18A0A0C4DH31 117 aa13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 SLC22A23A1A5C7 686 aa13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 H7C1C5 153 aa13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 SOCS2O14508 198 aa13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 HS3ST1O14792 307 aa13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 IDH3BO43837 385 aa13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 IGKV3-15P01624 115 aa13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 IGLV1-44P01699 117 aa13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 HLA-HP01893 362 aa13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 RAF1P04049 648 aa13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 CD79AP11912 226 aa13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 DNASE1P24855 282 aa13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 FASP25445 335 aa13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 NOS3P29474 1203 aa13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 GUCA1AP43080 201 aaPredicted RBP13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 LCN6P62502 163 aa13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 MRPS34P82930 218 aaKnown RBP13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 COX10Q12887 443 aa13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 KEAP1Q14145 624 aa13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 ZNF672Q499Z4 452 aaPredicted RBP13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 SHQ1Q6PI26 577 aaKnown RBP13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 SLC22A25Q6T423 547 aa13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 CD300LDQ6UXZ3 194 aa13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 MDP1Q86V88 176 aa13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 JAZF1Q86VZ6 243 aa13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 KBTBD8Q8NFY9 601 aa13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 AKAP1Q92667 903 aaKnown RBP eCLIP13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 NRBF2Q96F24 287 aa13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 FEVQ99581 238 aa13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 KCNN2Q9H2S1 579 aa13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 EGLN3Q9H6Z9 239 aa13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 ZNF556Q9HAH1 456 aa13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 TBC1D23Q9NUY8 699 aa13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 IL20Q9NYY1 176 aa13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 FBXL3Q9UKT7 428 aa13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 DCHS2Q6V1P9 2916 aa13.11□□□□□ -0.31
IGHV3-53-201ENST00000390627 ZNF503-AS2A6NEH8 195 aa13.1□□□□□ -0.31
IGHV3-53-201ENST00000390627 RAB36O95755 333 aa13.1□□□□□ -0.31
IGHV3-53-201ENST00000390627 IDH3GP51553 393 aaPredicted RBP13.1□□□□□ -0.31
IGHV3-53-201ENST00000390627 CDH11P55287 796 aa13.1□□□□□ -0.31
IGHV3-53-201ENST00000390627 ACTR3P61158 418 aa13.1□□□□□ -0.31
IGHV3-53-201ENST00000390627 NPRL3Q12980 569 aa13.1□□□□□ -0.31
IGHV3-53-201ENST00000390627 ATP6AP1Q15904 470 aa13.1□□□□□ -0.31
IGHV3-53-201ENST00000390627 SLC36A2Q495M3 483 aa13.1□□□□□ -0.31
IGHV3-53-201ENST00000390627 CLEC12AQ5QGZ9 265 aa13.1□□□□□ -0.31
IGHV3-53-201ENST00000390627 DNM1P34Q6PK57 102 aa13.1□□□□□ -0.31
IGHV3-53-201ENST00000390627 SLC16A14Q7RTX9 510 aa13.1□□□□□ -0.31
IGHV3-53-201ENST00000390627 TMEM179BQ7Z7N9 219 aa13.1□□□□□ -0.31
IGHV3-53-201ENST00000390627 SKA3Q8IX90 412 aa13.1□□□□□ -0.31
IGHV3-53-201ENST00000390627 C10orf67Q8IYJ2 551 aa13.1□□□□□ -0.31
IGHV3-53-201ENST00000390627 FBXW5Q969U6 566 aa13.1□□□□□ -0.31
IGHV3-53-201ENST00000390627 SNX18Q96RF0 628 aa13.1□□□□□ -0.31
IGHV3-53-201ENST00000390627 NIPSNAP1Q9BPW8 284 aa13.1□□□□□ -0.31
IGHV3-53-201ENST00000390627 BDH2Q9BUT1 245 aa13.1□□□□□ -0.31
IGHV3-53-201ENST00000390627 SIAEQ9HAT2 523 aa13.1□□□□□ -0.31
IGHV3-53-201ENST00000390627 B3GNT2Q9NY97 397 aa13.1□□□□□ -0.31
IGHV3-53-201ENST00000390627 VSX1Q9NZR4 365 aaPredicted RBP13.1□□□□□ -0.31
IGHV3-53-201ENST00000390627 POU2F3Q9UKI9 436 aa13.1□□□□□ -0.31
IGHV3-53-201ENST00000390627 BAIAP2Q9UQB8 552 aa13.1□□□□□ -0.31
IGHV3-53-201ENST00000390627 PLEKHA6Q9Y2H5 1048 aa13.1□□□□□ -0.31
IGHV3-53-201ENST00000390627 UGT2A1Q9Y4X1 527 aa13.1□□□□□ -0.31
IGHV3-53-201ENST00000390627 A0A1W2PPL8 197 aa13.09□□□□□ -0.31
IGHV3-53-201ENST00000390627 SHISA9B4DS77 424 aa13.09□□□□□ -0.31
IGHV3-53-201ENST00000390627 SOX14O95416 240 aa13.09□□□□□ -0.31
IGHV3-53-201ENST00000390627 RENP00797 406 aa13.09□□□□□ -0.31
IGHV3-53-201ENST00000390627 CRYAAP02489 173 aa13.09□□□□□ -0.31
IGHV3-53-201ENST00000390627 CECR9P0C854 216 aa13.09□□□□□ -0.31
IGHV3-53-201ENST00000390627 ANXA8P13928 327 aa13.09□□□□□ -0.31
IGHV3-53-201ENST00000390627 CDAP32320 146 aa13.09□□□□□ -0.31
IGHV3-53-201ENST00000390627 PTDSS1P48651 473 aaKnown RBP13.09□□□□□ -0.31
IGHV3-53-201ENST00000390627 RAB1AP62820 205 aa13.09□□□□□ -0.31
IGHV3-53-201ENST00000390627 PIGFQ07326 219 aa13.09□□□□□ -0.31
IGHV3-53-201ENST00000390627 SPOCK1Q08629 439 aa13.09□□□□□ -0.31
IGHV3-53-201ENST00000390627 KPNB1Q14974 876 aaKnown RBP13.09□□□□□ -0.31
IGHV3-53-201ENST00000390627 TMEM53Q6P2H8 277 aa13.09□□□□□ -0.31
IGHV3-53-201ENST00000390627 FOXL2NBQ6ZUU3 175 aa13.09□□□□□ -0.31
IGHV3-53-201ENST00000390627 PTCHD4Q6ZW05 846 aa13.09□□□□□ -0.31
IGHV3-53-201ENST00000390627 ZNF611Q8N823 705 aa13.09□□□□□ -0.31
IGHV3-53-201ENST00000390627 IL17RDQ8NFM7 739 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms