RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 RNLSQ5VYX0 342 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 OR4D10Q8NGI6 311 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 LURAP1Q96LR2 239 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 SLC6A18Q96N87 628 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 C20orf141Q9NUB4 165 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 CPNE7Q9UBL6 633 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 DNAJB6O75190 326 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 MPC2O95563 127 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 ITGB8P26012 769 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 ARRB1P49407 418 aaPredicted RBP13.05□□□□□ -0.32
RTF1-201ENST00000389629 ARHGAP11BQ3KRB8 267 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 SLC39A5Q6ZMH5 540 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 HSD17B13Q7Z5P4 300 aaPredicted RBP13.05□□□□□ -0.32
RTF1-201ENST00000389629 BAP18Q8IXM2 172 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 OR1S2Q8NGQ3 325 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 ARHGDIGQ99819 225 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 WFDC6Q9BQY6 131 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 CA10Q9NS85 328 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 LUZP4Q9P127 313 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 MSRAQ9UJ68 235 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 ING1Q9UK53 422 aaPredicted RBP13.05□□□□□ -0.32
RTF1-201ENST00000389629 A0A0A6YYD5 115 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 TRAV1-2A0A0B4J238 106 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 IDSB3KWA1 339 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 S100A8P05109 93 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 AVPR2P30518 371 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 CCR2P41597 374 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 HSD17B11Q8NBQ5 300 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 OR1J2Q8NGS2 313 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 OR9A4Q8NGU2 314 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 MIB2Q96AX9 1013 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 WDR34Q96EX3 536 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 APOBEC3BQ9UH17 382 aaKnown RBP13.05□□□□□ -0.32
RTF1-201ENST00000389629 SPTBP11277 2137 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 PLPP2O43688 288 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 NME1P15531 152 aaKnown RBP13.05□□□□□ -0.32
RTF1-201ENST00000389629 ZNF44P15621 663 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 PI3P19957 117 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 SERPINF1P36955 418 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 SLC26A5P58743 744 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 KIR2DS3Q14952 304 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 SLC16A9Q7RTY1 509 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 OR2A1Q8NGT9 310 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 OR6N1Q8NGY5 312 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 EHFQ9NZC4 300 aa13.05□□□□□ -0.32
RTF1-201ENST00000389629 PRRT4C9JH25 899 aa13.04□□□□□ -0.32
RTF1-201ENST00000389629 CTGFP29279 349 aa13.04□□□□□ -0.32
RTF1-201ENST00000389629 ETFDHQ16134 617 aa13.04□□□□□ -0.32
RTF1-201ENST00000389629 SGCAQ16586 387 aa13.04□□□□□ -0.32
RTF1-201ENST00000389629 SOHLH1Q5JUK2 328 aa13.04□□□□□ -0.32
RTF1-201ENST00000389629 FAM213BQ8TBF2 198 aa13.04□□□□□ -0.32
RTF1-201ENST00000389629 JSRP1Q96MG2 331 aaPredicted RBP13.04□□□□□ -0.32
RTF1-201ENST00000389629 SIGLEC11Q96RL6 698 aa13.04□□□□□ -0.32
RTF1-201ENST00000389629 FN3KRPQ9HA64 309 aa13.04□□□□□ -0.32
RTF1-201ENST00000389629 ZFP64Q9NPA5 681 aa13.04□□□□□ -0.32
RTF1-201ENST00000389629 EXOGQ9Y2C4 368 aaKnown RBP13.04□□□□□ -0.32
RTF1-201ENST00000389629 FAM96BQ9Y3D0 163 aa13.04□□□□□ -0.32
RTF1-201ENST00000389629 RFPL4AA6NLU0 287 aa13.04□□□□□ -0.32
RTF1-201ENST00000389629 RFPL4AL1F8VTS6 287 aa13.04□□□□□ -0.32
RTF1-201ENST00000389629 IFNA2P01563 188 aa13.04□□□□□ -0.32
RTF1-201ENST00000389629 PNMTP11086 282 aa13.04□□□□□ -0.32
RTF1-201ENST00000389629 UBE2KP61086 200 aa13.04□□□□□ -0.32
RTF1-201ENST00000389629 MANEAQ5SRI9 462 aa13.04□□□□□ -0.32
RTF1-201ENST00000389629 PELI1Q96FA3 418 aa13.04□□□□□ -0.32
RTF1-201ENST00000389629 ADAT1Q9BUB4 502 aaKnown RBP13.04□□□□□ -0.32
RTF1-201ENST00000389629 CCDC86Q9H6F5 360 aaKnown RBP13.04□□□□□ -0.32
RTF1-201ENST00000389629 LRFN1Q9P244 771 aa13.04□□□□□ -0.32
RTF1-201ENST00000389629 A0A1W2PS29 197 aa13.04□□□□□ -0.32
RTF1-201ENST00000389629 IL5P05113 134 aa13.04□□□□□ -0.32
RTF1-201ENST00000389629 ARF1P84077 181 aaKnown RBP13.04□□□□□ -0.32
RTF1-201ENST00000389629 GLO1Q04760 184 aa13.04□□□□□ -0.32
RTF1-201ENST00000389629 DUSP8Q13202 625 aa13.04□□□□□ -0.32
RTF1-201ENST00000389629 GPM6BQ13491 265 aa13.04□□□□□ -0.32
RTF1-201ENST00000389629 MEX3BQ6ZN04 569 aaKnown RBP13.04□□□□□ -0.32
RTF1-201ENST00000389629 ZNF704Q6ZNC4 412 aaPredicted RBP13.04□□□□□ -0.32
RTF1-201ENST00000389629 C2orf42Q9NWW7 574 aa13.04□□□□□ -0.32
RTF1-201ENST00000389629 RGPD3A6NKT7 1758 aaPredicted RBP13.04□□□□□ -0.32
RTF1-201ENST00000389629 RGPD4Q7Z3J3 1758 aa13.04□□□□□ -0.32
RTF1-201ENST00000389629 BCL2L11O43521 198 aa13.04□□□□□ -0.32
RTF1-201ENST00000389629 NMBP08949 121 aa13.04□□□□□ -0.32
RTF1-201ENST00000389629 FOSL1P15407 271 aa13.04□□□□□ -0.32
RTF1-201ENST00000389629 CXCL2P19875 107 aa13.04□□□□□ -0.32
RTF1-201ENST00000389629 PSMB6P28072 239 aa13.04□□□□□ -0.32
RTF1-201ENST00000389629 NAXDQ8IW45 347 aa13.04□□□□□ -0.32
RTF1-201ENST00000389629 HAVCR2Q8TDQ0 301 aa13.04□□□□□ -0.32
RTF1-201ENST00000389629 SENP5Q96HI0 755 aaPredicted RBP13.04□□□□□ -0.32
RTF1-201ENST00000389629 TAF9BQ9HBM6 251 aa13.04□□□□□ -0.32
RTF1-201ENST00000389629 SPACA1Q9HBV2 294 aa13.04□□□□□ -0.32
RTF1-201ENST00000389629 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.03□□□□□ -0.32
RTF1-201ENST00000389629 FAM74A7A6NL05 159 aa13.03□□□□□ -0.32
RTF1-201ENST00000389629 GLCEO94923 617 aa13.03□□□□□ -0.32
RTF1-201ENST00000389629 THBS1P07996 1170 aa13.03□□□□□ -0.32
RTF1-201ENST00000389629 CLINT1Q14677 625 aa13.03□□□□□ -0.32
RTF1-201ENST00000389629 PPA1Q15181 289 aa13.03□□□□□ -0.32
RTF1-201ENST00000389629 C2orf76Q3KRA6 126 aa13.03□□□□□ -0.32
RTF1-201ENST00000389629 FAM74A3Q4VXF1 159 aa13.03□□□□□ -0.32
RTF1-201ENST00000389629 DPY19L2P2Q6ZN68 376 aa13.03□□□□□ -0.32
RTF1-201ENST00000389629 GIMAP5Q96F15 307 aa13.03□□□□□ -0.32
RTF1-201ENST00000389629 FAM212BQ9NTI7 297 aaPredicted RBP13.03□□□□□ -0.32
RTF1-201ENST00000389629 WIF1Q9Y5W5 379 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms