RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 F5P12259 2224 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 TICRRQ7Z2Z1 1910 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 A0A1W2PQF6 199 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 GXYLT2A0PJZ3 443 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 KLF4O43474 513 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 PRKNO60260 465 aaPredicted RBP12.6□□□□□ -0.39
SDC1-202ENST00000381150 OR2T7P0C7T2 308 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 ZNF136P52737 540 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 ADAM8P78325 824 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 SHHQ15465 462 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 CSRP2Q16527 193 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 TMEM64Q6YI46 380 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 RD3Q7Z3Z2 195 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 OR2L5Q8NG80 312 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 OR2T27Q8NH04 317 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 MOAP1Q96BY2 351 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 LCORQ96JN0 433 aaPredicted RBP12.6□□□□□ -0.39
SDC1-202ENST00000381150 CNTNAP3BQ96NU0 1288 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 SDF2Q99470 211 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 CDCA3Q99618 268 aaPredicted RBP12.6□□□□□ -0.39
SDC1-202ENST00000381150 TRAV14DV4A0A0A6YYC5 116 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 OR6C65A6NJZ3 312 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 GPANK1O95872 356 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 ACAA1P09110 424 aaPredicted RBP12.6□□□□□ -0.39
SDC1-202ENST00000381150 RAB40ALP0C0E4 278 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 POU3F4P49335 361 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 DHODHQ02127 395 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 PEA15Q15121 130 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 CEBPEQ15744 281 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 LIPNQ5VXI9 398 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 MFSD12Q6NUT3 480 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 SLC48A1Q6P1K1 146 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 LEG1Q6P5S2 330 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 NUDT18Q6ZVK8 323 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 DND1Q8IYX4 353 aaKnown RBP12.6□□□□□ -0.39
SDC1-202ENST00000381150 CHST4Q8NCG5 386 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 OR6N2Q8NGY6 317 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 RAB40AQ8WXH6 277 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 SLC6A7Q99884 636 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 LMAN2LQ9H0V9 348 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 ANKRD10Q9NXR5 420 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 KLF15Q9UIH9 416 aa12.6□□□□□ -0.39
SDC1-202ENST00000381150 TBC1D3DA0A087WVF3 549 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 TBC1D3IA0A087WXS9 549 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 TBC1D3KA0A087X1G2 549 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 A0A1B0GV50 99 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 DCDC2BA2VCK2 349 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 TBC1D3FA6NER0 549 aaPredicted RBP12.59□□□□□ -0.39
SDC1-202ENST00000381150 MPTX1A8MV57 137 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 TBC1D3LB9A6J9 549 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 ACTL6AO96019 429 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 TBC1D3HP0C7X1 549 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 ADRA2CP18825 462 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 COL9A1P20849 921 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 AGTR1P30556 359 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 RFC3P40938 356 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 EXOSC6Q5RKV6 272 aaKnown RBP12.59□□□□□ -0.39
SDC1-202ENST00000381150 TBC1D3GQ6DHY5 549 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 TBC1D3CQ6IPX1 549 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 NAA40Q86UY6 237 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 TMEM200AQ86VY9 491 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 TBC1D3Q8IZP1 549 aaPredicted RBP12.59□□□□□ -0.39
SDC1-202ENST00000381150 ARMC10Q8N2F6 343 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 CCDC107Q8WV48 283 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 DCUN1D4Q92564 292 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 MIB2Q96AX9 1013 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 ZNF681Q96N22 645 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 SELENOIQ9C0D9 397 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 TWSG1Q9GZX9 223 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 MIOXQ9UGB7 285 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 POM121BA6NF01 834 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 RPA2P15927 270 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 ZNF14P17017 642 aaPredicted RBP12.59□□□□□ -0.39
SDC1-202ENST00000381150 ADCYAP1P18509 176 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 RORAP35398 523 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 RAB5BP61020 215 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 CLINT1Q14677 625 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 EIPR1Q53HC9 387 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 STOML3Q8TAV4 291 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 GLYATL2Q8WU03 294 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 ZBTB8AQ96BR9 441 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 CHRDQ9H2X0 955 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 KIR3DX1Q9H7L2 352 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 TBC1D29Q9UFV1 150 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 A0A0D9SG52 128 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 DNAJB6O75190 326 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 ALOX12BO75342 701 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 GLSO94925 669 aaPredicted RBP12.59□□□□□ -0.39
SDC1-202ENST00000381150 CSF1P09603 554 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 CPMP14384 443 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 PGAM2P15259 253 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 PGDP52209 483 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 HYAL1Q12794 435 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 SMAD2Q15796 467 aaKnown RBP12.59□□□□□ -0.39
SDC1-202ENST00000381150 CDNFQ49AH0 187 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 ARHGAP11AQ6P4F7 1023 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 TMEM205Q6UW68 189 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 SLC36A1Q7Z2H8 476 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 FAM122BQ7Z309 247 aa12.59□□□□□ -0.39
SDC1-202ENST00000381150 MFSD9Q8NBP5 474 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms