RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 KDM4DQ6B0I6 523 aa16.96■□□□□ 0.31
GTF3A-201ENST00000381140 LRFN4Q6PJG9 635 aa16.96■□□□□ 0.31
GTF3A-201ENST00000381140 SMARCD3Q6STE5 483 aa16.96■□□□□ 0.31
GTF3A-201ENST00000381140 KLHL17Q6TDP4 642 aa16.96■□□□□ 0.31
GTF3A-201ENST00000381140 THSD4Q6ZMP0 1018 aa16.96■□□□□ 0.31
GTF3A-201ENST00000381140 Q96M85 177 aa16.96■□□□□ 0.31
GTF3A-201ENST00000381140 NELFAQ9H3P2 528 aa16.96■□□□□ 0.31
GTF3A-201ENST00000381140 LIME1Q9H400 295 aa16.96■□□□□ 0.31
GTF3A-201ENST00000381140 SMURF2Q9HAU4 748 aa16.96■□□□□ 0.31
GTF3A-201ENST00000381140 SMPD3Q9NY59 655 aaPredicted RBP16.96■□□□□ 0.31
GTF3A-201ENST00000381140 GRHPRQ9UBQ7 328 aa16.96■□□□□ 0.31
GTF3A-201ENST00000381140 RAB26Q9ULW5 256 aa16.96■□□□□ 0.31
GTF3A-201ENST00000381140 DPRXA6NFQ7 191 aa16.95■□□□□ 0.3
GTF3A-201ENST00000381140 A6NIZ1 184 aa16.95■□□□□ 0.3
GTF3A-201ENST00000381140 NPIPB13A6NJU9 1138 aa16.95■□□□□ 0.3
GTF3A-201ENST00000381140 NPIPB4C9JG80 1138 aa16.95■□□□□ 0.3
GTF3A-201ENST00000381140 H7C1C5 153 aa16.95■□□□□ 0.3
GTF3A-201ENST00000381140 ARHGEF9O43307 516 aa16.95■□□□□ 0.3
GTF3A-201ENST00000381140 DHHO43323 396 aa16.95■□□□□ 0.3
GTF3A-201ENST00000381140 ANXA8P13928 327 aa16.95■□□□□ 0.3
GTF3A-201ENST00000381140 RAP1BP61224 184 aa16.95■□□□□ 0.3
GTF3A-201ENST00000381140 LCN6P62502 163 aa16.95■□□□□ 0.3
GTF3A-201ENST00000381140 RAP1AP62834 184 aa16.95■□□□□ 0.3
GTF3A-201ENST00000381140 FMODQ06828 376 aa16.95■□□□□ 0.3
GTF3A-201ENST00000381140 NCMAPQ5T1S8 102 aa16.95■□□□□ 0.3
GTF3A-201ENST00000381140 ZNF770Q6IQ21 691 aaPredicted RBP16.95■□□□□ 0.3
GTF3A-201ENST00000381140 C1orf94Q6P1W5 598 aa16.95■□□□□ 0.3
GTF3A-201ENST00000381140 ZNF704Q6ZNC4 412 aaPredicted RBP16.95■□□□□ 0.3
GTF3A-201ENST00000381140 SSX8Q7RTT4 187 aa16.95■□□□□ 0.3
GTF3A-201ENST00000381140 CLDN22Q8N7P3 220 aa16.95■□□□□ 0.3
GTF3A-201ENST00000381140 AQP11Q8NBQ7 271 aa16.95■□□□□ 0.3
GTF3A-201ENST00000381140 NSMAFQ92636 917 aa16.95■□□□□ 0.3
GTF3A-201ENST00000381140 HTRA1Q92743 480 aa16.95■□□□□ 0.3
GTF3A-201ENST00000381140 MCHR2Q969V1 340 aa16.95■□□□□ 0.3
GTF3A-201ENST00000381140 GTPBP3Q969Y2 492 aaKnown RBP16.95■□□□□ 0.3
GTF3A-201ENST00000381140 ZNF570Q96NI8 536 aa16.95■□□□□ 0.3
GTF3A-201ENST00000381140 FOXB1Q99853 325 aa16.95■□□□□ 0.3
GTF3A-201ENST00000381140 MRPL13Q9BYD1 178 aaKnown RBP16.95■□□□□ 0.3
GTF3A-201ENST00000381140 TMEFF2Q9UIK5 374 aaPredicted RBP16.95■□□□□ 0.3
GTF3A-201ENST00000381140 IER3IP1Q9Y5U9 82 aa16.95■□□□□ 0.3
GTF3A-201ENST00000381140 LRBAP50851 2863 aa16.95■□□□□ 0.3
GTF3A-201ENST00000381140 TEX13CA0A0J9YWL9 993 aa16.94■□□□□ 0.3
GTF3A-201ENST00000381140 XKRYO14609 159 aa16.94■□□□□ 0.3
GTF3A-201ENST00000381140 SLC2A10O95528 541 aa16.94■□□□□ 0.3
GTF3A-201ENST00000381140 PPP1R3DO95685 299 aa16.94■□□□□ 0.3
GTF3A-201ENST00000381140 GASTP01350 101 aa16.94■□□□□ 0.3
GTF3A-201ENST00000381140 GSSP48637 474 aa16.94■□□□□ 0.3
GTF3A-201ENST00000381140 DAPP51397 102 aa16.94■□□□□ 0.3
GTF3A-201ENST00000381140 FXYD6P3P58550 94 aa16.94■□□□□ 0.3
GTF3A-201ENST00000381140 TSPAN31Q12999 210 aa16.94■□□□□ 0.3
GTF3A-201ENST00000381140 FAM205BPQ63HN1 556 aa16.94■□□□□ 0.3
GTF3A-201ENST00000381140 ADAM5Q6NVV9 412 aa16.94■□□□□ 0.3
GTF3A-201ENST00000381140 CDH24Q86UP0 819 aa16.94■□□□□ 0.3
GTF3A-201ENST00000381140 ARIH2OSQ8N7S6 290 aa16.94■□□□□ 0.3
GTF3A-201ENST00000381140 ZNF519Q8TB69 540 aa16.94■□□□□ 0.3
GTF3A-201ENST00000381140 RASD2Q96D21 266 aa16.94■□□□□ 0.3
GTF3A-201ENST00000381140 SAMD8Q96LT4 415 aa16.94■□□□□ 0.3
GTF3A-201ENST00000381140 OR52D1Q9H346 318 aa16.94■□□□□ 0.3
GTF3A-201ENST00000381140 PLEKHF2Q9H8W4 249 aa16.94■□□□□ 0.3
GTF3A-201ENST00000381140 KIF17Q9P2E2 1029 aa16.94■□□□□ 0.3
GTF3A-201ENST00000381140 RNF115Q9Y4L5 304 aa16.94■□□□□ 0.3
GTF3A-201ENST00000381140 RAI1Q7Z5J4 1906 aaPredicted RBP16.93■□□□□ 0.3
GTF3A-201ENST00000381140 ABCD4O14678 606 aa16.93■□□□□ 0.3
GTF3A-201ENST00000381140 IGFBP5P24593 272 aa16.93■□□□□ 0.3
GTF3A-201ENST00000381140 SLC6A6P31641 620 aa16.93■□□□□ 0.3
GTF3A-201ENST00000381140 ZNF84P51523 738 aa16.93■□□□□ 0.3
GTF3A-201ENST00000381140 RAD23AP54725 363 aa16.93■□□□□ 0.3
GTF3A-201ENST00000381140 KRR1Q13601 381 aaKnown RBP16.93■□□□□ 0.3
GTF3A-201ENST00000381140 TMEM108Q6UXF1 575 aa16.93■□□□□ 0.3
GTF3A-201ENST00000381140 ATG16L2Q8NAA4 619 aa16.93■□□□□ 0.3
GTF3A-201ENST00000381140 KBTBD8Q8NFY9 601 aa16.93■□□□□ 0.3
GTF3A-201ENST00000381140 RBP7Q96R05 134 aa16.93■□□□□ 0.3
GTF3A-201ENST00000381140 KCNK17Q96T54 332 aa16.93■□□□□ 0.3
GTF3A-201ENST00000381140 FEVQ99581 238 aa16.93■□□□□ 0.3
GTF3A-201ENST00000381140 ALG12Q9BV10 488 aa16.93■□□□□ 0.3
GTF3A-201ENST00000381140 IFT27Q9BW83 186 aa16.93■□□□□ 0.3
GTF3A-201ENST00000381140 EGLN3Q9H6Z9 239 aa16.93■□□□□ 0.3
GTF3A-201ENST00000381140 OBP2BQ9NPH6 170 aa16.93■□□□□ 0.3
GTF3A-201ENST00000381140 MGAT4BQ9UQ53 548 aa16.93■□□□□ 0.3
GTF3A-201ENST00000381140 ORC6Q9Y5N6 252 aa16.93■□□□□ 0.3
GTF3A-201ENST00000381140 ARPC4-TTLL3A0A0A6YYG9 625 aa16.92■□□□□ 0.3
GTF3A-201ENST00000381140 CENPBD1B2RD01 187 aa16.92■□□□□ 0.3
GTF3A-201ENST00000381140 HLA-HP01893 362 aa16.92■□□□□ 0.3
GTF3A-201ENST00000381140 CD79AP11912 226 aa16.92■□□□□ 0.3
GTF3A-201ENST00000381140 PIGFQ07326 219 aa16.92■□□□□ 0.3
GTF3A-201ENST00000381140 SPOCK1Q08629 439 aa16.92■□□□□ 0.3
GTF3A-201ENST00000381140 NPRL3Q12980 569 aa16.92■□□□□ 0.3
GTF3A-201ENST00000381140 HIST3H3Q16695 136 aa16.92■□□□□ 0.3
GTF3A-201ENST00000381140 MESTQ5EB52 335 aa16.92■□□□□ 0.3
GTF3A-201ENST00000381140 DPY19L2P2Q6ZN68 376 aa16.92■□□□□ 0.3
GTF3A-201ENST00000381140 FAM122BQ7Z309 247 aa16.92■□□□□ 0.3
GTF3A-201ENST00000381140 NEUROG1Q92886 237 aa16.92■□□□□ 0.3
GTF3A-201ENST00000381140 ERMAPQ96PL5 475 aaPredicted RBP16.92■□□□□ 0.3
GTF3A-201ENST00000381140 ADI1Q9BV57 179 aa16.92■□□□□ 0.3
GTF3A-201ENST00000381140 DGCR6LQ9BY27 220 aa16.92■□□□□ 0.3
GTF3A-201ENST00000381140 Q9H521 79 aa16.92■□□□□ 0.3
GTF3A-201ENST00000381140 NRIP3Q9NQ35 241 aa16.92■□□□□ 0.3
GTF3A-201ENST00000381140 TMEM38BQ9NVV0 291 aa16.92■□□□□ 0.3
GTF3A-201ENST00000381140 PLEKHA6Q9Y2H5 1048 aa16.92■□□□□ 0.3
GTF3A-201ENST00000381140 IGKV1D-43A0A0B4J1Z2 117 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms