RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 PLA2G7Q13093 441 aa17.3■□□□□ 0.36
PCDHA4-201ENST00000378125 NUBPLQ8TB37 319 aa17.3■□□□□ 0.36
PCDHA4-201ENST00000378125 SYNPRQ8TBG9 265 aa17.3■□□□□ 0.36
PCDHA4-201ENST00000378125 STK35Q8TDR2 534 aa17.3■□□□□ 0.36
PCDHA4-201ENST00000378125 TSEN15Q8WW01 171 aaKnown RBP17.3■□□□□ 0.36
PCDHA4-201ENST00000378125 PHYHIPQ92561 330 aa17.3■□□□□ 0.36
PCDHA4-201ENST00000378125 CREB3L1Q96BA8 519 aa17.3■□□□□ 0.36
PCDHA4-201ENST00000378125 SLITRK2Q9H156 845 aa17.3■□□□□ 0.36
PCDHA4-201ENST00000378125 CPAMD8Q8IZJ3 1885 aa17.3■□□□□ 0.36
PCDHA4-201ENST00000378125 TRABD2BA6NFA1 517 aa17.29■□□□□ 0.36
PCDHA4-201ENST00000378125 MEN1O00255 615 aa17.29■□□□□ 0.36
PCDHA4-201ENST00000378125 OR2T1O43869 369 aa17.29■□□□□ 0.36
PCDHA4-201ENST00000378125 POU3F1Q03052 451 aaPredicted RBP17.29■□□□□ 0.36
PCDHA4-201ENST00000378125 PUDPQ08623 228 aa17.29■□□□□ 0.36
PCDHA4-201ENST00000378125 EIF2B1Q14232 305 aaKnown RBP17.29■□□□□ 0.36
PCDHA4-201ENST00000378125 ZNF248Q8NDW4 579 aa17.29■□□□□ 0.36
PCDHA4-201ENST00000378125 EDAQ92838 391 aa17.29■□□□□ 0.36
PCDHA4-201ENST00000378125 EMC6Q9BV81 110 aa17.29■□□□□ 0.36
PCDHA4-201ENST00000378125 OR2B2Q9GZK3 357 aa17.29■□□□□ 0.36
PCDHA4-201ENST00000378125 PPP4R1LQ9P1A2 415 aa17.29■□□□□ 0.36
PCDHA4-201ENST00000378125 A0A0A6YYJ9 748 aa17.29■□□□□ 0.36
PCDHA4-201ENST00000378125 TRBV5-5A0A0J9YX44 114 aa17.29■□□□□ 0.36
PCDHA4-201ENST00000378125 ANXA2P2A6NMY6 339 aa17.29■□□□□ 0.36
PCDHA4-201ENST00000378125 ANXA2P07355 339 aaKnown RBP17.29■□□□□ 0.36
PCDHA4-201ENST00000378125 CELA2AP08217 269 aa17.29■□□□□ 0.36
PCDHA4-201ENST00000378125 TMIGD3P0DMS9 266 aaPredicted RBP17.29■□□□□ 0.36
PCDHA4-201ENST00000378125 CCKBRP32239 447 aa17.29■□□□□ 0.36
PCDHA4-201ENST00000378125 MRPL28Q13084 256 aaKnown RBP17.29■□□□□ 0.36
PCDHA4-201ENST00000378125 SLC17A1Q14916 467 aa17.29■□□□□ 0.36
PCDHA4-201ENST00000378125 KRT77Q7Z794 578 aa17.29■□□□□ 0.36
PCDHA4-201ENST00000378125 NOXA1Q86UR1 476 aa17.29■□□□□ 0.36
PCDHA4-201ENST00000378125 LINC00346Q8IVM7 164 aa17.29■□□□□ 0.36
PCDHA4-201ENST00000378125 MISPQ8IVT2 679 aa17.29■□□□□ 0.36
PCDHA4-201ENST00000378125 UBALD2Q8IYN6 164 aa17.29■□□□□ 0.36
PCDHA4-201ENST00000378125 ADAMTS14Q8WXS8 1223 aa17.29■□□□□ 0.36
PCDHA4-201ENST00000378125 ITFG2Q969R8 447 aa17.29■□□□□ 0.36
PCDHA4-201ENST00000378125 C5orf34Q96MH7 638 aa17.29■□□□□ 0.36
PCDHA4-201ENST00000378125 DCBLD2Q96PD2 775 aa17.29■□□□□ 0.36
PCDHA4-201ENST00000378125 OR8B4Q96RC9 309 aa17.29■□□□□ 0.36
PCDHA4-201ENST00000378125 MFRPQ9BY79 579 aa17.29■□□□□ 0.36
PCDHA4-201ENST00000378125 METTL7AQ9H8H3 244 aa17.29■□□□□ 0.36
PCDHA4-201ENST00000378125 MRPL39Q9NYK5 338 aaKnown RBP17.29■□□□□ 0.36
PCDHA4-201ENST00000378125 VSX1Q9NZR4 365 aaPredicted RBP17.29■□□□□ 0.36
PCDHA4-201ENST00000378125 FREM2Q5SZK8 3169 aa17.28■□□□□ 0.36
PCDHA4-201ENST00000378125 EXPH5Q8NEV8 1989 aa17.28■□□□□ 0.36
PCDHA4-201ENST00000378125 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.28■□□□□ 0.36
PCDHA4-201ENST00000378125 IGKV1D-43A0A0B4J1Z2 117 aa17.28■□□□□ 0.36
PCDHA4-201ENST00000378125 TEX51A0A1B0GUA7 166 aa17.28■□□□□ 0.36
PCDHA4-201ENST00000378125 VSTM2BA6NLU5 285 aa17.28■□□□□ 0.36
PCDHA4-201ENST00000378125 EFNA2O43921 213 aa17.28■□□□□ 0.36
PCDHA4-201ENST00000378125 MFGE8Q08431 387 aaPredicted RBP17.28■□□□□ 0.36
PCDHA4-201ENST00000378125 LRRTM1Q86UE6 522 aa17.28■□□□□ 0.36
PCDHA4-201ENST00000378125 RNF170Q96K19 258 aa17.28■□□□□ 0.36
PCDHA4-201ENST00000378125 C4orf45Q96LM5 186 aa17.28■□□□□ 0.36
PCDHA4-201ENST00000378125 BEX1Q9HBH7 125 aa17.28■□□□□ 0.36
PCDHA4-201ENST00000378125 MYOTQ9UBF9 498 aa17.28■□□□□ 0.36
PCDHA4-201ENST00000378125 MED12Q93074 2177 aa17.28■□□□□ 0.36
PCDHA4-201ENST00000378125 NPIPA5E9PKD4 350 aa17.27■□□□□ 0.36
PCDHA4-201ENST00000378125 MAPK3P27361 379 aaPredicted RBP17.27■□□□□ 0.36
PCDHA4-201ENST00000378125 GDNFP39905 211 aa17.27■□□□□ 0.36
PCDHA4-201ENST00000378125 TLE3Q04726 772 aa17.27■□□□□ 0.36
PCDHA4-201ENST00000378125 SQSTM1Q13501 440 aa17.27■□□□□ 0.36
PCDHA4-201ENST00000378125 SLC18B1Q6NT16 456 aa17.27■□□□□ 0.36
PCDHA4-201ENST00000378125 GPR148Q8TDV2 347 aa17.27■□□□□ 0.36
PCDHA4-201ENST00000378125 ABHD6Q9BV23 337 aa17.27■□□□□ 0.36
PCDHA4-201ENST00000378125 NPIPA1Q9UND3 350 aa17.27■□□□□ 0.36
PCDHA4-201ENST00000378125 TMEM212A6NML5 194 aa17.27■□□□□ 0.35
PCDHA4-201ENST00000378125 ZNF254O75437 659 aa17.27■□□□□ 0.35
PCDHA4-201ENST00000378125 RRAS2P62070 204 aaPredicted RBP17.27■□□□□ 0.35
PCDHA4-201ENST00000378125 TMEM53Q6P2H8 277 aa17.27■□□□□ 0.35
PCDHA4-201ENST00000378125 ST8SIA1Q92185 356 aa17.27■□□□□ 0.35
PCDHA4-201ENST00000378125 DPAGT1Q9H3H5 408 aa17.27■□□□□ 0.35
PCDHA4-201ENST00000378125 KCNK15Q9H427 330 aa17.27■□□□□ 0.35
PCDHA4-201ENST00000378125 FBXL3Q9UKT7 428 aa17.27■□□□□ 0.35
PCDHA4-201ENST00000378125 ZFAND5O76080 213 aa17.26■□□□□ 0.35
PCDHA4-201ENST00000378125 TCRBP04435 133 aa17.26■□□□□ 0.35
PCDHA4-201ENST00000378125 SFRP4Q6FHJ7 346 aaPredicted RBP17.26■□□□□ 0.35
PCDHA4-201ENST00000378125 CORO6Q6QEF8 472 aa17.26■□□□□ 0.35
PCDHA4-201ENST00000378125 ZNF679Q8IYX0 411 aa17.26■□□□□ 0.35
PCDHA4-201ENST00000378125 OR5L2Q8NGL0 311 aa17.26■□□□□ 0.35
PCDHA4-201ENST00000378125 OR52I2Q8NH67 350 aa17.26■□□□□ 0.35
PCDHA4-201ENST00000378125 MNTQ99583 582 aa17.26■□□□□ 0.35
PCDHA4-201ENST00000378125 CACNG6Q9BXT2 260 aa17.26■□□□□ 0.35
PCDHA4-201ENST00000378125 KLK11Q9UBX7 282 aa17.26■□□□□ 0.35
PCDHA4-201ENST00000378125 FBXL2Q9UKC9 423 aa17.26■□□□□ 0.35
PCDHA4-201ENST00000378125 PHYHO14832 338 aa17.26■□□□□ 0.35
PCDHA4-201ENST00000378125 APOBEC1P41238 236 aaKnown RBP17.26■□□□□ 0.35
PCDHA4-201ENST00000378125 GLO1Q04760 184 aa17.26■□□□□ 0.35
PCDHA4-201ENST00000378125 RASGEF1BQ0VAM2 473 aa17.26■□□□□ 0.35
PCDHA4-201ENST00000378125 LPAL2Q16609 132 aa17.26■□□□□ 0.35
PCDHA4-201ENST00000378125 BTBD16Q32M84 506 aa17.26■□□□□ 0.35
PCDHA4-201ENST00000378125 PRAMEF20Q5VT98 475 aa17.26■□□□□ 0.35
PCDHA4-201ENST00000378125 H1FNTQ75WM6 255 aaPredicted RBP17.26■□□□□ 0.35
PCDHA4-201ENST00000378125 GLB1L2Q8IW92 636 aa17.26■□□□□ 0.35
PCDHA4-201ENST00000378125 DND1Q8IYX4 353 aaKnown RBP17.26■□□□□ 0.35
PCDHA4-201ENST00000378125 SMIM4Q8WVI0 70 aa17.26■□□□□ 0.35
PCDHA4-201ENST00000378125 AKAP1Q92667 903 aaKnown RBP eCLIP17.26■□□□□ 0.35
PCDHA4-201ENST00000378125 SNX18Q96RF0 628 aa17.26■□□□□ 0.35
PCDHA4-201ENST00000378125 GTPBP2Q9BX10 602 aaKnown RBP17.26■□□□□ 0.35
PCDHA4-201ENST00000378125 DEFB126Q9BYW3 111 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms