RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 SCO1O75880 301 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 NSA2O95478 260 aaKnown RBP11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 GRPP07492 148 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 CNR1P21554 472 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 MPLP40238 635 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 BTG1P62324 171 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 VASH2Q86V25 355 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 STT3BQ8TCJ2 826 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 HPSE2Q8WWQ2 592 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 TMEM38AQ9H6F2 299 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 N4BP2Q86UW6 1770 aaPredicted RBP11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 KIR2DS5A0A0G2JLQ3 304 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 A0A0G2JNG1 304 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 KIR2DS3K7RE56 304 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 PIAS2O75928 621 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 UTS2O95399 124 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 B3GALT4O96024 378 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 ASAH1Q13510 395 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 EDDM3AQ14507 147 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 KIR2DS5Q14953 304 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 C2orf76Q3KRA6 126 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 SHEQ5VZ18 495 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 NPSR1Q6W5P4 371 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 TMEM64Q6YI46 380 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 TMEM106AQ96A25 262 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 GPR78Q96P69 363 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 RBM14Q96PK6 669 aaKnown RBP11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 TMEM59Q9BXS4 323 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 GFRA2O00451 464 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 MRPL33O75394 65 aaKnown RBP11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 DDAH2O95865 285 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 CPEP16870 476 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 ARNTP27540 789 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 HTR5AP47898 357 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 FJX1Q86VR8 437 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 YIPF5Q969M3 257 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 SIDT1Q9NXL6 827 aaKnown RBP11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 MYO5AQ9Y4I1 1855 aaKnown RBP11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 LOC100289279A0A1B0GTE1 492 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 AGAP14A8MT82 685 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 IMPA2O14732 288 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 MMP11P24347 488 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 MTCP1P56278 107 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 BAXQ07812 192 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 KCNAB1Q14722 419 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 GLYR1Q49A26 553 aaPredicted RBP11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 C19orf47Q8N9M1 422 aaKnown RBP11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 ZBTB44Q8NCP5 570 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 C1orf198Q9H425 327 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 M0R1B8 84 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 ZFAND5O76080 213 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 PMS2P2O95744 297 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 NAGAP17050 411 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 MISPQ8IVT2 679 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 BHLHE23Q8NDY6 225 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 OR10R2Q8NGX6 335 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 ST8SIA4Q92187 359 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 PSMF1Q92530 271 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 FGGYQ96C11 551 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 ATG2BQ96BY7 2078 aa11.03□□□□□ -0.64
PCDHA9-201ENST00000378122 TCRBV5S2A0A599 114 aa11.02□□□□□ -0.64
PCDHA9-201ENST00000378122 EPHA5P54756 1037 aa11.02□□□□□ -0.64
PCDHA9-201ENST00000378122 OGFOD3Q6PK18 319 aa11.02□□□□□ -0.64
PCDHA9-201ENST00000378122 DPY19L2P2Q6ZN68 376 aa11.02□□□□□ -0.64
PCDHA9-201ENST00000378122 OR5M9Q8NGP3 310 aa11.02□□□□□ -0.64
PCDHA9-201ENST00000378122 SGK3Q96BR1 496 aa11.02□□□□□ -0.64
PCDHA9-201ENST00000378122 MSI2Q96DH6 328 aaKnown RBP11.02□□□□□ -0.64
PCDHA9-201ENST00000378122 TCTN2Q96GX1 697 aa11.02□□□□□ -0.64
PCDHA9-201ENST00000378122 ZDHHC11BP0C7U3 371 aa11.02□□□□□ -0.64
PCDHA9-201ENST00000378122 CLINT1Q14677 625 aa11.02□□□□□ -0.64
PCDHA9-201ENST00000378122 XKR7Q5GH72 579 aa11.02□□□□□ -0.64
PCDHA9-201ENST00000378122 ANKRD9Q96BM1 317 aaPredicted RBP11.02□□□□□ -0.64
PCDHA9-201ENST00000378122 DDOQ99489 341 aa11.02□□□□□ -0.64
PCDHA9-201ENST00000378122 ULBP2Q9BZM5 246 aa11.02□□□□□ -0.64
PCDHA9-201ENST00000378122 C6orf106Q9H6K1 298 aaPredicted RBP11.02□□□□□ -0.64
PCDHA9-201ENST00000378122 FBXO8Q9NRD0 319 aa11.02□□□□□ -0.64
PCDHA9-201ENST00000378122 CALCBP10092 127 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 FPR3P25089 353 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 EDDM3BP56851 147 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 ZNF718Q3SXZ3 478 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 ZNF468Q5VIY5 522 aaPredicted RBP11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 TMEM71Q6P5X7 295 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 PAQR6Q6TCH4 344 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 Q6ZTK2 550 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 TMPRSS7Q7RTY8 843 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 PPP1R35Q8TAP8 253 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 OR11A1Q9GZK7 315 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 EPHX3Q9H6B9 360 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 OPA3Q9H6K4 179 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 TAF9BQ9HBM6 251 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 IGHV3-20A0A0C4DH32 117 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 A0A1B0GWA3 101 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 HOXC11O43248 304 aaPredicted RBP11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 ATP1B1P05026 303 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 TRAPPC2P0DI81 140 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 TRAPPC2BP0DI82 140 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 BLVRBP30043 206 aaPredicted RBP11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 HOXA1P49639 335 aaPredicted RBP11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 PMPCAQ10713 525 aa11.02□□□□□ -0.65
PCDHA9-201ENST00000378122 MDGA2Q7Z553 956 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms