RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 SDHAP31040 664 aa16.3■□□□□ 0.2
GNE-201ENST00000377902 PRSS3P35030 304 aa16.3■□□□□ 0.2
GNE-201ENST00000377902 RAB38P57729 211 aa16.3■□□□□ 0.2
GNE-201ENST00000377902 ZNF546Q86UE3 836 aa16.3■□□□□ 0.2
GNE-201ENST00000377902 GALNT16Q8N428 558 aa16.3■□□□□ 0.2
GNE-201ENST00000377902 METTL27Q8N6F8 245 aaPredicted RBP16.3■□□□□ 0.2
GNE-201ENST00000377902 CLEC1AQ8NC01 280 aa16.3■□□□□ 0.2
GNE-201ENST00000377902 GPR148Q8TDV2 347 aa16.3■□□□□ 0.2
GNE-201ENST00000377902 ZNF75AQ96N20 296 aa16.3■□□□□ 0.2
GNE-201ENST00000377902 GAS2L1Q99501 681 aaPredicted RBP16.3■□□□□ 0.2
GNE-201ENST00000377902 CERS4Q9HA82 394 aa16.3■□□□□ 0.2
GNE-201ENST00000377902 GRHPRQ9UBQ7 328 aa16.3■□□□□ 0.2
GNE-201ENST00000377902 CDV3Q9UKY7 258 aaKnown RBP16.3■□□□□ 0.2
GNE-201ENST00000377902 CCSO14618 274 aa16.3■□□□□ 0.2
GNE-201ENST00000377902 KCNAB3O43448 404 aa16.3■□□□□ 0.2
GNE-201ENST00000377902 ALOX12BO75342 701 aa16.3■□□□□ 0.2
GNE-201ENST00000377902 OR4E1P0C645 316 aa16.3■□□□□ 0.2
GNE-201ENST00000377902 PRKACAP17612 351 aa16.3■□□□□ 0.2
GNE-201ENST00000377902 ALOX5APP20292 161 aa16.3■□□□□ 0.2
GNE-201ENST00000377902 CSF2RBP32927 897 aa16.3■□□□□ 0.2
GNE-201ENST00000377902 RPL18Q07020 188 aaKnown RBP16.3■□□□□ 0.2
GNE-201ENST00000377902 ATXN7L3Q14CW9 347 aaPredicted RBP16.3■□□□□ 0.2
GNE-201ENST00000377902 NR0B2Q15466 257 aa16.3■□□□□ 0.2
GNE-201ENST00000377902 TMEM196Q5HYL7 178 aa16.3■□□□□ 0.2
GNE-201ENST00000377902 PM20D2Q8IYS1 436 aa16.3■□□□□ 0.2
GNE-201ENST00000377902 PXT1Q8NFP0 134 aa16.3■□□□□ 0.2
GNE-201ENST00000377902 ZNF417Q8TAU3 575 aa16.3■□□□□ 0.2
GNE-201ENST00000377902 MCHR2Q969V1 340 aa16.3■□□□□ 0.2
GNE-201ENST00000377902 FAM3DQ96BQ1 224 aa16.3■□□□□ 0.2
GNE-201ENST00000377902 SEC22AQ96IW7 307 aa16.3■□□□□ 0.2
GNE-201ENST00000377902 COMMD4Q9H0A8 199 aa16.3■□□□□ 0.2
GNE-201ENST00000377902 TCEAL2Q9H3H9 227 aaPredicted RBP16.3■□□□□ 0.2
GNE-201ENST00000377902 Q9N2J8 555 aa16.3■□□□□ 0.2
GNE-201ENST00000377902 EFCAB7A8K855 629 aa16.29■□□□□ 0.2
GNE-201ENST00000377902 WISP1O95388 367 aa16.29■□□□□ 0.2
GNE-201ENST00000377902 WNT11O96014 354 aa16.29■□□□□ 0.2
GNE-201ENST00000377902 CELA2BP08218 269 aaPredicted RBP16.29■□□□□ 0.2
GNE-201ENST00000377902 KIR2DL1P43626 348 aaPredicted RBP16.29■□□□□ 0.2
GNE-201ENST00000377902 HTRA3P83110 453 aa16.29■□□□□ 0.2
GNE-201ENST00000377902 SDR16C5Q8N3Y7 309 aa16.29■□□□□ 0.2
GNE-201ENST00000377902 C15orf40Q8WUR7 153 aa16.29■□□□□ 0.2
GNE-201ENST00000377902 LRRC46Q96FV0 321 aa16.29■□□□□ 0.2
GNE-201ENST00000377902 GPX7Q96SL4 187 aaPredicted RBP16.29■□□□□ 0.2
GNE-201ENST00000377902 HIF3AQ9Y2N7 669 aa16.29■□□□□ 0.2
GNE-201ENST00000377902 SLC6A5Q9Y345 797 aa16.29■□□□□ 0.2
GNE-201ENST00000377902 PNPP00491 289 aa16.29■□□□□ 0.2
GNE-201ENST00000377902 RPA2P15927 270 aa16.29■□□□□ 0.2
GNE-201ENST00000377902 CENPAP49450 140 aa16.29■□□□□ 0.2
GNE-201ENST00000377902 SLC25A1P53007 311 aa16.29■□□□□ 0.2
GNE-201ENST00000377902 NFATC4Q14934 902 aa16.29■□□□□ 0.2
GNE-201ENST00000377902 ZNF627Q7L945 461 aa16.29■□□□□ 0.2
GNE-201ENST00000377902 KRT77Q7Z794 578 aa16.29■□□□□ 0.2
GNE-201ENST00000377902 GABRG1Q8N1C3 465 aa16.29■□□□□ 0.2
GNE-201ENST00000377902 OR1J2Q8NGS2 313 aa16.29■□□□□ 0.2
GNE-201ENST00000377902 TMEM185BQ9H7F4 350 aa16.29■□□□□ 0.2
GNE-201ENST00000377902 MMP25Q9NPA2 562 aa16.29■□□□□ 0.2
GNE-201ENST00000377902 PCOLCE2Q9UKZ9 415 aa16.29■□□□□ 0.2
GNE-201ENST00000377902 FARSAQ9Y285 508 aaKnown RBP16.29■□□□□ 0.2
GNE-201ENST00000377902 TRIOO75962 3097 aa16.28■□□□□ 0.2
GNE-201ENST00000377902 LOC100509620A0A075B734 347 aa16.28■□□□□ 0.2
GNE-201ENST00000377902 RFPL4AA6NLU0 287 aa16.28■□□□□ 0.2
GNE-201ENST00000377902 RFPL4AL1F8VTS6 287 aa16.28■□□□□ 0.2
GNE-201ENST00000377902 GDI1P31150 447 aa16.28■□□□□ 0.2
GNE-201ENST00000377902 ISXQ2M1V0 245 aa16.28■□□□□ 0.2
GNE-201ENST00000377902 OR10K2Q6IF99 312 aa16.28■□□□□ 0.2
GNE-201ENST00000377902 MDGA2Q7Z553 956 aa16.28■□□□□ 0.2
GNE-201ENST00000377902 PARGQ86W56 976 aa16.28■□□□□ 0.2
GNE-201ENST00000377902 PHOSPHO1Q8TCT1 267 aa16.28■□□□□ 0.2
GNE-201ENST00000377902 WDR92Q96MX6 357 aa16.28■□□□□ 0.2
GNE-201ENST00000377902 CRISPLD2Q9H0B8 497 aa16.28■□□□□ 0.2
GNE-201ENST00000377902 TAS2R8Q9NYW2 309 aa16.28■□□□□ 0.2
GNE-201ENST00000377902 C11orf98E9PRG8 122 aa16.28■□□□□ 0.2
GNE-201ENST00000377902 AQP8O94778 261 aa16.28■□□□□ 0.2
GNE-201ENST00000377902 PLGP00747 810 aaPredicted RBP16.28■□□□□ 0.2
GNE-201ENST00000377902 ST6GAL1P15907 406 aa16.28■□□□□ 0.2
GNE-201ENST00000377902 C1QL3Q5VWW1 255 aa16.28■□□□□ 0.2
GNE-201ENST00000377902 LIN54Q6MZP7 749 aa16.28■□□□□ 0.2
GNE-201ENST00000377902 ATG4DQ86TL0 474 aaPredicted RBP16.28■□□□□ 0.2
GNE-201ENST00000377902 YAF2Q8IY57 180 aa16.28■□□□□ 0.2
GNE-201ENST00000377902 STEAP2Q8NFT2 490 aa16.28■□□□□ 0.2
GNE-201ENST00000377902 NARS2Q96I59 477 aaKnown RBP16.28■□□□□ 0.2
GNE-201ENST00000377902 C4orf45Q96LM5 186 aa16.28■□□□□ 0.2
GNE-201ENST00000377902 ELOVL3Q9HB03 270 aa16.28■□□□□ 0.2
GNE-201ENST00000377902 TAS2R3Q9NYW6 316 aa16.28■□□□□ 0.2
GNE-201ENST00000377902 GDE1Q9NZC3 331 aa16.28■□□□□ 0.2
GNE-201ENST00000377902 CGGBP1Q9UFW8 167 aaPredicted RBP16.28■□□□□ 0.2
GNE-201ENST00000377902 GLS2Q9UI32 602 aa16.28■□□□□ 0.2
GNE-201ENST00000377902 TMEM212A6NML5 194 aa16.27■□□□□ 0.2
GNE-201ENST00000377902 C2orf74A8MZ97 194 aa16.27■□□□□ 0.2
GNE-201ENST00000377902 HLA-DQA2P01906 255 aa16.27■□□□□ 0.2
GNE-201ENST00000377902 ITGB2P05107 769 aa16.27■□□□□ 0.2
GNE-201ENST00000377902 GLULP15104 373 aa16.27■□□□□ 0.2
GNE-201ENST00000377902 LUMP51884 338 aaPredicted RBP16.27■□□□□ 0.2
GNE-201ENST00000377902 SQSTM1Q13501 440 aa16.27■□□□□ 0.2
GNE-201ENST00000377902 MEP1BQ16820 701 aa16.27■□□□□ 0.2
GNE-201ENST00000377902 ALG11Q2TAA5 492 aa16.27■□□□□ 0.2
GNE-201ENST00000377902 BEST3Q8N1M1 668 aa16.27■□□□□ 0.2
GNE-201ENST00000377902 C12orf45Q8N5I9 185 aaPredicted RBP16.27■□□□□ 0.2
GNE-201ENST00000377902 BPIFCQ8NFQ6 507 aa16.27■□□□□ 0.2
GNE-201ENST00000377902 NPAS1Q99742 590 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms