RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 MRPS10P82664 201 aaKnown RBP13.17□□□□□ -0.3
TCOF1-202ENST00000377797 CORO6Q6QEF8 472 aa13.17□□□□□ -0.3
TCOF1-202ENST00000377797 ZNF321PQ8N8H1 164 aa13.17□□□□□ -0.3
TCOF1-202ENST00000377797 OR51T1Q8NGJ9 327 aa13.17□□□□□ -0.3
TCOF1-202ENST00000377797 OR52A1Q9UKL2 312 aa13.17□□□□□ -0.3
TCOF1-202ENST00000377797 ANKUB1A6NFN9 424 aa13.17□□□□□ -0.3
TCOF1-202ENST00000377797 MT-CO3P00414 261 aa13.17□□□□□ -0.3
TCOF1-202ENST00000377797 PDGFBP01127 241 aaPredicted RBP13.17□□□□□ -0.3
TCOF1-202ENST00000377797 THBS2P35442 1172 aa13.17□□□□□ -0.3
TCOF1-202ENST00000377797 MFAP5Q13361 173 aa13.17□□□□□ -0.3
TCOF1-202ENST00000377797 RIN1Q13671 783 aa13.17□□□□□ -0.3
TCOF1-202ENST00000377797 CD226Q15762 336 aa13.17□□□□□ -0.3
TCOF1-202ENST00000377797 POGLUT1Q8NBL1 392 aa13.17□□□□□ -0.3
TCOF1-202ENST00000377797 HAVCR1Q96D42 359 aa13.17□□□□□ -0.3
TCOF1-202ENST00000377797 NECAB3Q96P71 396 aaPredicted RBP13.17□□□□□ -0.3
TCOF1-202ENST00000377797 SCN2AQ99250 2005 aa13.17□□□□□ -0.3
TCOF1-202ENST00000377797 IGHV5-10-1A0A0J9YXX1 117 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 SCGNO76038 276 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 RAB3DO95716 219 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 CT45A8P0DMV1 189 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 CT45A9P0DMV2 189 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 HOXD12P35452 270 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 CT45A2Q5DJT8 189 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 ZNF813Q6ZN06 617 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 APH1BQ8WW43 257 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 EMC7Q9NPA0 242 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 CHST2Q9Y4C5 530 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 A0A1W2PR77 199 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 QDPRP09417 244 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 NAGAP17050 411 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 MAML2Q8IZL2 1156 aaPredicted RBP13.16□□□□□ -0.3
TCOF1-202ENST00000377797 PLPP5Q8NEB5 264 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 PTPMT1Q8WUK0 201 aaPredicted RBP13.16□□□□□ -0.3
TCOF1-202ENST00000377797 TAAR8Q969N4 342 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 DTX4Q9Y2E6 619 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 IGHV3-9P01782 118 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 RFC3P40938 356 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 FOXK1P85037 733 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 ARL6IP1Q15041 203 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 C11orf91Q3C1V1 193 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 NCCRP1Q6ZVX7 275 aaPredicted RBP13.16□□□□□ -0.3
TCOF1-202ENST00000377797 KIF18BQ86Y91 864 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 CPT1CQ8TCG5 803 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 DNASE2BQ8WZ79 361 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 RADILQ96JH8 1075 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 P4HTMQ9NXG6 502 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 REV1Q9UBZ9 1251 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 ANKRD36A6QL64 1941 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 CCDC163A0A0D9SF12 145 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 CENPVL1A0A0U1RR11 272 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 TRIM64CA6NLI5 447 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 INO80EQ8NBZ0 244 aaPredicted RBP13.16□□□□□ -0.3
TCOF1-202ENST00000377797 CHPT1Q8WUD6 406 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 FLRT3Q9NZU0 649 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 ASH2LQ9UBL3 628 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 FBXO9Q9UK97 447 aaPredicted RBP13.16□□□□□ -0.3
TCOF1-202ENST00000377797 FBXL3Q9UKT7 428 aa13.16□□□□□ -0.3
TCOF1-202ENST00000377797 PRAMEF27A3QJZ7 478 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 ZNF850A8MQ14 1090 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 OGFOD3Q6PK18 319 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 OR13C5Q8NGS8 318 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 MGAT4CQ9UBM8 478 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 hCG_1807616A0A1W2PRN6 198 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 L7N2F9 121 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 ARPC3O15145 178 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 CXCL13O43927 109 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 GIFP27352 417 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 FOXL2P58012 376 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 ATXN7L3Q14CW9 347 aaPredicted RBP13.15□□□□□ -0.3
TCOF1-202ENST00000377797 CCDC58Q4VC31 144 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 TMEM53Q6P2H8 277 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 DGAT2L6Q6ZPD8 337 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 COX15Q7KZN9 410 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 SYT9Q86SS6 491 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 GJC3Q8NFK1 279 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 THAP6Q8TBB0 222 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 TSPAN10Q9H1Z9 355 aaPredicted RBP13.15□□□□□ -0.3
TCOF1-202ENST00000377797 KCNG2Q9UJ96 466 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 TCRBV16S1A1N1A0A5B0 115 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 ANKRD61A6NGH8 418 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 CCDC36Q8IYA8 594 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 RDH10Q8IZV5 341 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 OR51D1Q8NGF3 324 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 LRRC20Q8TCA0 184 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 SLC35B4Q969S0 331 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 FGGYQ96C11 551 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 GNRHR2Q96P88 292 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 SORCS2Q96PQ0 1159 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 MENTQ9BUN1 341 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 RCE1Q9Y256 329 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 CBR3O75828 277 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 CTSBP07858 339 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 UBCP0CG48 685 aaKnown RBP13.15□□□□□ -0.3
TCOF1-202ENST00000377797 DNASE1P24855 282 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 RBMXP38159 391 aaKnown RBP13.15□□□□□ -0.3
TCOF1-202ENST00000377797 MAP2K6P52564 334 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 CDK5R1Q15078 307 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 ZSCAN4Q8NAM6 433 aaPredicted RBP13.15□□□□□ -0.3
TCOF1-202ENST00000377797 MIB2Q96AX9 1013 aa13.15□□□□□ -0.3
TCOF1-202ENST00000377797 DCBLD2Q96PD2 775 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms