RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 NR4A1P22736 598 aa14.55□□□□□ -0.08
HMGN4-201ENST00000377575 ZNF133P52736 654 aaPredicted RBP14.55□□□□□ -0.08
HMGN4-201ENST00000377575 CTXN1P60606 82 aa14.55□□□□□ -0.08
HMGN4-201ENST00000377575 RPL27P61353 136 aaKnown RBP14.55□□□□□ -0.08
HMGN4-201ENST00000377575 LSM11P83369 360 aaKnown RBP eCLIP14.55□□□□□ -0.08
HMGN4-201ENST00000377575 MXRA7P84157 204 aa14.55□□□□□ -0.08
HMGN4-201ENST00000377575 RAB39AQ14964 217 aa14.55□□□□□ -0.08
HMGN4-201ENST00000377575 C16orf89Q6UX73 402 aa14.55□□□□□ -0.08
HMGN4-201ENST00000377575 SLC16A14Q7RTX9 510 aa14.55□□□□□ -0.08
HMGN4-201ENST00000377575 MAPK1IP1LQ8NDC0 245 aa14.55□□□□□ -0.08
HMGN4-201ENST00000377575 OR10H5Q8NGA6 315 aa14.55□□□□□ -0.08
HMGN4-201ENST00000377575 OR13C2Q8NGS9 318 aa14.55□□□□□ -0.08
HMGN4-201ENST00000377575 FNDC8Q8TC99 324 aa14.55□□□□□ -0.08
HMGN4-201ENST00000377575 FAM168AQ92567 244 aa14.55□□□□□ -0.08
HMGN4-201ENST00000377575 SORCS2Q96PQ0 1159 aa14.55□□□□□ -0.08
HMGN4-201ENST00000377575 SH3GL3Q99963 347 aa14.55□□□□□ -0.08
HMGN4-201ENST00000377575 C1orf198Q9H425 327 aa14.55□□□□□ -0.08
HMGN4-201ENST00000377575 GORASP2Q9H8Y8 452 aa14.55□□□□□ -0.08
HMGN4-201ENST00000377575 RNF121Q9H920 327 aa14.55□□□□□ -0.08
HMGN4-201ENST00000377575 KRCC1Q9NPI7 259 aaPredicted RBP14.55□□□□□ -0.08
HMGN4-201ENST00000377575 SLC7A8Q9UHI5 535 aa14.55□□□□□ -0.08
HMGN4-201ENST00000377575 CMAHPQ9Y471 501 aa14.55□□□□□ -0.08
HMGN4-201ENST00000377575 CSPG4Q6UVK1 2322 aa14.55□□□□□ -0.08
HMGN4-201ENST00000377575 IGHV4-30-2A0A087WSY4 118 aa14.54□□□□□ -0.08
HMGN4-201ENST00000377575 A0A1W2PRQ8 180 aa14.54□□□□□ -0.08
HMGN4-201ENST00000377575 A6NIZ1 184 aa14.54□□□□□ -0.08
HMGN4-201ENST00000377575 DYNC1I1O14576 645 aa14.54□□□□□ -0.08
HMGN4-201ENST00000377575 TP53P04637 393 aaPredicted RBP14.54□□□□□ -0.08
HMGN4-201ENST00000377575 SERPINA5P05154 406 aa14.54□□□□□ -0.08
HMGN4-201ENST00000377575 ZNF35P13682 527 aa14.54□□□□□ -0.08
HMGN4-201ENST00000377575 SLC25A16P16260 332 aa14.54□□□□□ -0.08
HMGN4-201ENST00000377575 ITGA2P17301 1181 aa14.54□□□□□ -0.08
HMGN4-201ENST00000377575 TCN1P20061 433 aaPredicted RBP14.54□□□□□ -0.08
HMGN4-201ENST00000377575 GPR4P46093 362 aa14.54□□□□□ -0.08
HMGN4-201ENST00000377575 MNAT1P51948 309 aa14.54□□□□□ -0.08
HMGN4-201ENST00000377575 RAP1BP61224 184 aa14.54□□□□□ -0.08
HMGN4-201ENST00000377575 RAP1AP62834 184 aa14.54□□□□□ -0.08
HMGN4-201ENST00000377575 PPP2R2BQ00005 443 aa14.54□□□□□ -0.08
HMGN4-201ENST00000377575 DGCR6Q14129 220 aa14.54□□□□□ -0.08
HMGN4-201ENST00000377575 KRT72Q14CN4 511 aa14.54□□□□□ -0.08
HMGN4-201ENST00000377575 FXNQ16595 210 aa14.54□□□□□ -0.08
HMGN4-201ENST00000377575 KRTAP21-3Q3LHN1 58 aa14.54□□□□□ -0.08
HMGN4-201ENST00000377575 FGD3Q5JSP0 725 aa14.54□□□□□ -0.08
HMGN4-201ENST00000377575 GKAP1Q5VSY0 366 aaPredicted RBP14.54□□□□□ -0.08
HMGN4-201ENST00000377575 TMPRSS11FQ6ZWK6 438 aa14.54□□□□□ -0.08
HMGN4-201ENST00000377575 MEX3DQ86XN8 651 aaKnown RBP14.54□□□□□ -0.08
HMGN4-201ENST00000377575 ANKS4BQ8N8V4 417 aa14.54□□□□□ -0.08
HMGN4-201ENST00000377575 FAM156AQ8NDB6 213 aa14.54□□□□□ -0.08
HMGN4-201ENST00000377575 OR51A7Q8NH64 312 aa14.54□□□□□ -0.08
HMGN4-201ENST00000377575 HDAC2Q92769 488 aaKnown RBP14.54□□□□□ -0.08
HMGN4-201ENST00000377575 KCNK17Q96T54 332 aa14.54□□□□□ -0.08
HMGN4-201ENST00000377575 VRK1Q99986 396 aaPredicted RBP14.54□□□□□ -0.08
HMGN4-201ENST00000377575 RAB1BQ9H0U4 201 aa14.54□□□□□ -0.08
HMGN4-201ENST00000377575 KCNN2Q9H2S1 579 aa14.54□□□□□ -0.08
HMGN4-201ENST00000377575 MYOZ1Q9NP98 299 aaPredicted RBP14.54□□□□□ -0.08
HMGN4-201ENST00000377575 ARL8BQ9NVJ2 186 aa14.54□□□□□ -0.08
HMGN4-201ENST00000377575 NDUFAF4Q9P032 175 aa14.54□□□□□ -0.08
HMGN4-201ENST00000377575 CHD3Q12873 2000 aaKnown RBP14.54□□□□□ -0.08
HMGN4-201ENST00000377575 NAV3Q8IVL0 2385 aa14.53□□□□□ -0.08
HMGN4-201ENST00000377575 SLC2A10O95528 541 aa14.53□□□□□ -0.08
HMGN4-201ENST00000377575 PTHP01270 115 aa14.53□□□□□ -0.08
HMGN4-201ENST00000377575 PATE4P0C8F1 98 aa14.53□□□□□ -0.08
HMGN4-201ENST00000377575 RPL4P36578 427 aaKnown RBP14.53□□□□□ -0.08
HMGN4-201ENST00000377575 PDLIM4P50479 330 aa14.53□□□□□ -0.08
HMGN4-201ENST00000377575 MRPS34P82930 218 aaKnown RBP14.53□□□□□ -0.08
HMGN4-201ENST00000377575 PLP2Q04941 152 aa14.53□□□□□ -0.08
HMGN4-201ENST00000377575 SPATS1Q496A3 300 aa14.53□□□□□ -0.08
HMGN4-201ENST00000377575 THEM4Q5T1C6 240 aa14.53□□□□□ -0.08
HMGN4-201ENST00000377575 TBPL2Q6SJ96 375 aa14.53□□□□□ -0.08
HMGN4-201ENST00000377575 IGFN1Q86VF2 1251 aa14.53□□□□□ -0.08
HMGN4-201ENST00000377575 ZNF584Q8IVC4 421 aa14.53□□□□□ -0.08
HMGN4-201ENST00000377575 SVOPLQ8N434 492 aa14.53□□□□□ -0.08
HMGN4-201ENST00000377575 LRRC75AQ8NAA5 344 aa14.53□□□□□ -0.08
HMGN4-201ENST00000377575 SLC30A7Q8NEW0 376 aa14.53□□□□□ -0.08
HMGN4-201ENST00000377575 SLC7A13Q8TCU3 470 aa14.53□□□□□ -0.08
HMGN4-201ENST00000377575 NSMCE2Q96MF7 247 aa14.53□□□□□ -0.08
HMGN4-201ENST00000377575 TSPAN32Q96QS1 320 aa14.53□□□□□ -0.08
HMGN4-201ENST00000377575 RBP7Q96R05 134 aa14.53□□□□□ -0.08
HMGN4-201ENST00000377575 DYNLRB1Q9NP97 96 aa14.53□□□□□ -0.08
HMGN4-201ENST00000377575 FN1P02751 2386 aaKnown RBP14.52□□□□□ -0.08
HMGN4-201ENST00000377575 IQCMA0A1B0GVH7 501 aa14.52□□□□□ -0.09
HMGN4-201ENST00000377575 SLC22A23A1A5C7 686 aa14.52□□□□□ -0.09
HMGN4-201ENST00000377575 CDC42EP2O14613 210 aa14.52□□□□□ -0.09
HMGN4-201ENST00000377575 ARPC2O15144 300 aa14.52□□□□□ -0.09
HMGN4-201ENST00000377575 GLRXP35754 106 aa14.52□□□□□ -0.09
HMGN4-201ENST00000377575 GUCA1AP43080 201 aaPredicted RBP14.52□□□□□ -0.09
HMGN4-201ENST00000377575 VLDLRP98155 873 aa14.52□□□□□ -0.09
HMGN4-201ENST00000377575 FMODQ06828 376 aa14.52□□□□□ -0.09
HMGN4-201ENST00000377575 FHL1Q13642 323 aa14.52□□□□□ -0.09
HMGN4-201ENST00000377575 TBC1D28Q2M2D7 210 aa14.52□□□□□ -0.09
HMGN4-201ENST00000377575 ZBED5Q49AG3 693 aa14.52□□□□□ -0.09
HMGN4-201ENST00000377575 PODNL1Q6PEZ8 512 aa14.52□□□□□ -0.09
HMGN4-201ENST00000377575 TSEN54Q7Z6J9 526 aaKnown RBP14.52□□□□□ -0.09
HMGN4-201ENST00000377575 DEFB107AQ8IZN7 70 aa14.52□□□□□ -0.09
HMGN4-201ENST00000377575 LRRC18Q8N456 261 aa14.52□□□□□ -0.09
HMGN4-201ENST00000377575 FAM86B1Q8N7N1 296 aa14.52□□□□□ -0.09
HMGN4-201ENST00000377575 OR1J2Q8NGS2 313 aa14.52□□□□□ -0.09
HMGN4-201ENST00000377575 FGFBP3Q8TAT2 258 aa14.52□□□□□ -0.09
HMGN4-201ENST00000377575 ZNF519Q8TB69 540 aa14.52□□□□□ -0.09
HMGN4-201ENST00000377575 C10orf105Q8TEF2 133 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms