RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 GABRR3A8MPY1 467 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 PPP1R11O60927 126 aaPredicted RBP10.78□□□□□ -0.68
VPS13A-205ENST00000376636 COX5AP20674 150 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 MPGP29372 298 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 CARD18P57730 90 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 ZXDBP98169 803 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 B3GNTL1Q67FW5 361 aaPredicted RBP10.78□□□□□ -0.68
VPS13A-205ENST00000376636 NLRC3Q7RTR2 1065 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 FAM3DQ96BQ1 224 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 RPUSD3Q6P087 351 aaKnown RBP10.78□□□□□ -0.68
VPS13A-205ENST00000376636 TSEN54Q7Z6J9 526 aaKnown RBP10.78□□□□□ -0.68
VPS13A-205ENST00000376636 SIAH3Q8IW03 269 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 L3MBTL4Q8NA19 623 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 HRASLS5Q96KN8 279 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 AMBRA1Q9C0C7 1298 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 ZNF629Q9UEG4 869 aaPredicted RBP10.78□□□□□ -0.68
VPS13A-205ENST00000376636 PMS2P1A4D2B8 440 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 ARPC3O15145 178 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 CSF3P09919 207 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 RRADP55042 308 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 EDDM3BP56851 147 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 TUSC1Q2TAM9 212 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 NCR3LG1Q68D85 454 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 ACOT4Q8N9L9 421 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 GSX2Q9BZM3 304 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 DLL4Q9NR61 685 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 HSBP1O75506 76 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 HNF1AP20823 631 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 NXNL2Q5VZ03 156 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 FRMPD2BQ6IN97 320 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 BMPR1BO00238 502 aa10.77□□□□□ -0.68
VPS13A-205ENST00000376636 GALR2O43603 387 aaPredicted RBP10.77□□□□□ -0.68
VPS13A-205ENST00000376636 BMPR1AP36894 532 aa10.77□□□□□ -0.68
VPS13A-205ENST00000376636 VHLLQ6RSH7 139 aa10.77□□□□□ -0.68
VPS13A-205ENST00000376636 M0R143 59 aa10.77□□□□□ -0.68
VPS13A-205ENST00000376636 RRASP10301 218 aa10.77□□□□□ -0.68
VPS13A-205ENST00000376636 OR10G3Q8NGC4 313 aa10.77□□□□□ -0.68
VPS13A-205ENST00000376636 UTP4Q969X6 686 aaKnown RBP10.77□□□□□ -0.68
VPS13A-205ENST00000376636 PLEKHA2Q9HB19 425 aa10.77□□□□□ -0.68
VPS13A-205ENST00000376636 EIF1BO60739 113 aaKnown RBP10.77□□□□□ -0.69
VPS13A-205ENST00000376636 GLYATL3Q5SZD4 288 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 LETMD1Q6P1Q0 360 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 H1FXQ92522 213 aaKnown RBP10.77□□□□□ -0.69
VPS13A-205ENST00000376636 FAAP24Q9BTP7 215 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 APC2O95996 2303 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 TRBV11-1A0A0K0K1C0 115 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 ATP1B1P05026 303 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 NPY4RP50391 375 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 TRAV20A0A0B4J274 112 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 NXPH3O95157 252 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 SEMA4FO95754 770 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 SCGB1A1P11684 91 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 NME1P15531 152 aaKnown RBP10.77□□□□□ -0.69
VPS13A-205ENST00000376636 PSMB2P49721 201 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 FAM26DQ5JW98 314 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 SLC39A13Q96H72 371 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 NSG2Q9Y328 171 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 CACNA1SQ13698 1873 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 NSG1A0A0A6YYJ2 146 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 M0QZ24 198 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 EIF1P41567 113 aaKnown RBP10.77□□□□□ -0.69
VPS13A-205ENST00000376636 TSPAN31Q12999 210 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 MFAP5Q13361 173 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 OR6M1Q8NGM8 313 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 AAMDCQ9H7C9 122 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 AQP9O43315 295 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 STC2O76061 302 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 P2RX3P56373 397 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 ST8SIA4Q92187 359 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 CHD5Q8TDI0 1954 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 RPS19P39019 145 aaKnown RBP10.77□□□□□ -0.69
VPS13A-205ENST00000376636 BCL6P41182 706 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 KIAA1024LP59773 190 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 ABLIM2Q6H8Q1 611 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 KIR2DS5A0A0G2JLQ3 304 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 A0A0G2JNG1 304 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 KIR2DS3K7RE56 304 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 ABHD16AO95870 558 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 FGF7P21781 194 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 KIR2DS5Q14953 304 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 MARCH8Q5T0T0 291 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 C6orf132Q5T0Z8 1188 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 MRPL2Q5T653 305 aaKnown RBP10.77□□□□□ -0.69
VPS13A-205ENST00000376636 UQCC3Q6UW78 93 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 HSD17B8Q92506 261 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 NECTIN4Q96NY8 510 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 XYLT2Q9H1B5 865 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 TAS2R5Q9NYW4 299 aa10.77□□□□□ -0.69
VPS13A-205ENST00000376636 HEMK1Q9Y5R4 338 aaPredicted RBP10.77□□□□□ -0.69
VPS13A-205ENST00000376636 SGK494L7N484 410 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 BMP1P13497 986 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 SNRPBP14678 240 aaKnown RBP10.76□□□□□ -0.69
VPS13A-205ENST00000376636 OR2T6Q8NHC8 308 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 SLC7A6Q92536 515 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 CAPNS2Q96L46 248 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 CXorf58Q96LI9 332 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 SYT17Q9BSW7 474 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 NOSIPQ9Y314 301 aaKnown RBP10.76□□□□□ -0.69
VPS13A-205ENST00000376636 HEATR5BQ9P2D3 2071 aa10.76□□□□□ -0.69
VPS13A-205ENST00000376636 TCRBV3S1A0A5B6 114 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms