RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 TOMM34Q15785 309 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 C2orf76Q3KRA6 126 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 C3orf33Q6P1S2 294 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 CHRDL2Q6WN34 429 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 TMUB2Q71RG4 321 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 BAHD1Q8TBE0 780 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 LPAR4Q99677 370 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 PARP12Q9H0J9 701 aaKnown RBP13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 POLMQ9NP87 494 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 TAS2R4Q9NYW5 299 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 PCDHGA5Q9Y5G8 931 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 ENTPD2Q9Y5L3 495 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 TOR1AO14656 332 aa13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 UTS2O95399 124 aa13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 KNG1P01042 644 aa13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 ITGA5P08648 1049 aa13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 ZNF20P17024 532 aa13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 HSD11B1P28845 292 aa13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 SEC61A1P61619 476 aaKnown RBP13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 POU3F1Q03052 451 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 SLC9A3R2Q15599 337 aa13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 WBP2NLQ6ICG8 309 aa13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 SLC18B1Q6NT16 456 aa13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 BAIAP2L2Q6UXY1 529 aa13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 SLC29A4Q7RTT9 530 aa13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 OR2G2Q8NGZ5 317 aa13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 PAQR8Q8TEZ7 354 aa13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 KISS1RQ969F8 398 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 POFUT1Q9H488 388 aa13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 TMEM231Q9H6L2 316 aa13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 COA3Q9Y2R0 106 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 MEIKINA0A087WXM9 373 aa13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 METTL21EPA6NDL7 271 aa13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 C19orf47Q8N9M1 422 aaKnown RBP13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 OR6M1Q8NGM8 313 aa13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 NUDCD2Q8WVJ2 157 aa13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 KCNJ15Q99712 375 aa13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 SELENOIQ9C0D9 397 aa13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 ACKR4Q9NPB9 350 aa13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 MSRAQ9UJ68 235 aa13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 RPH3AQ9Y2J0 694 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 TMEM14AQ9Y6G1 99 aa13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 FREM3P0C091 2139 aa13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 ZNF878C9JN71 531 aa13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 H3BUI4 141 aa13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 PIN1P1O15428 100 aa13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 PRAF2O60831 178 aa13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 PRKACAP17612 351 aa13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 IL13RA1P78552 427 aa13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 NKAPLQ5M9Q1 402 aa13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 RNLSQ5VYX0 342 aa13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 ZC3HAV1LQ96H79 300 aaKnown RBP13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 MED29Q9NX70 200 aa13.08□□□□□ -0.32
TNFRSF1B-201ENST00000376259 hCG_1807616A0A1W2PRN6 198 aa13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 IGF2P01344 180 aa13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 DLSTP36957 453 aa13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 TSFMP43897 325 aaKnown RBP13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 BDH1Q02338 343 aa13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 OR52W1Q6IF63 320 aa13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 MUC20Q8N307 709 aaPredicted RBP13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 MAFIPQ8WZ33 124 aa13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 RBP7Q96R05 134 aa13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 STACQ99469 402 aa13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 ZNF701Q9NV72 531 aaPredicted RBP13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 ELF5Q9UKW6 265 aaPredicted RBP13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 RAB40ALP0C0E4 278 aa13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 ERGP11308 486 aa13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 PTBP1P26599 531 aaKnown RBP eCLIP13.07□□□□□ -0.321e-6■■■■■ 49.4
TNFRSF1B-201ENST00000376259 THBS2P35442 1172 aa13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 BLKP51451 505 aa13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 CLPPQ16740 277 aaPredicted RBP13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 SLC22A6Q4U2R8 563 aa13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 PWWP2BQ6NUJ5 590 aa13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 OVCH1Q7RTY7 1134 aa13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 OR11G2Q8NGC1 345 aa13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 RAB40AQ8WXH6 277 aa13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 ST6GALNAC5Q9BVH7 336 aa13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 ST6GALNAC2Q9UJ37 374 aa13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 B9D1Q9UPM9 204 aa13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 FADS1O60427 444 aa13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 RORAP35398 523 aa13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 ACKR1Q16570 336 aa13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 Q6ZS52 159 aa13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 MAMDC2Q7Z304 686 aaPredicted RBP13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 BATF2Q8N1L9 274 aa13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 TSTD1Q8NFU3 115 aa13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 HAVCR2Q8TDQ0 301 aa13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 SMIM3Q9BZL3 60 aa13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 ZNF223Q9UK11 482 aaPredicted RBP13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 POMT2Q9UKY4 750 aa13.07□□□□□ -0.32
TNFRSF1B-201ENST00000376259 PTPRZ1P23471 2315 aaPredicted RBP13.06□□□□□ -0.32
TNFRSF1B-201ENST00000376259 A0A0B4J2A0 478 aa13.06□□□□□ -0.32
TNFRSF1B-201ENST00000376259 ICOSLGO75144 302 aa13.06□□□□□ -0.32
TNFRSF1B-201ENST00000376259 IFNGR1P15260 489 aa13.06□□□□□ -0.32
TNFRSF1B-201ENST00000376259 AVPR2P30518 371 aa13.06□□□□□ -0.32
TNFRSF1B-201ENST00000376259 FMODQ06828 376 aa13.06□□□□□ -0.32
TNFRSF1B-201ENST00000376259 DND1Q8IYX4 353 aaKnown RBP13.06□□□□□ -0.32
TNFRSF1B-201ENST00000376259 FAM181AQ8N9Y4 354 aa13.06□□□□□ -0.32
TNFRSF1B-201ENST00000376259 NPEPL1Q8NDH3 523 aa13.06□□□□□ -0.32
TNFRSF1B-201ENST00000376259 ZBTB8AQ96BR9 441 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms