RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 FMODQ06828 376 aa20.25■□□□□ 0.83
HLA-C-202ENST00000376237 MRPL49Q13405 166 aaKnown RBP20.25■□□□□ 0.83
HLA-C-202ENST00000376237 RBM48Q5RL73 367 aaKnown RBP20.25■□□□□ 0.83
HLA-C-202ENST00000376237 FBXW9Q5XUX1 488 aa20.25■□□□□ 0.83
HLA-C-202ENST00000376237 ATCAYQ86WG3 371 aa20.25■□□□□ 0.83
HLA-C-202ENST00000376237 ZNF786Q8N393 782 aa20.25■□□□□ 0.83
HLA-C-202ENST00000376237 ZNF843Q8N446 348 aa20.25■□□□□ 0.83
HLA-C-202ENST00000376237 RND1Q92730 232 aa20.25■□□□□ 0.83
HLA-C-202ENST00000376237 SLC7A10Q9NS82 523 aa20.25■□□□□ 0.83
HLA-C-202ENST00000376237 SCN3BQ9NY72 215 aa20.25■□□□□ 0.83
HLA-C-202ENST00000376237 PCDHGB5Q9Y5G0 923 aa20.25■□□□□ 0.83
HLA-C-202ENST00000376237 EIF4E1BA6NMX2 242 aaKnown RBP20.24■□□□□ 0.83
HLA-C-202ENST00000376237 RPL36A-HNRNPH2H7BZ11 118 aa20.24■□□□□ 0.83
HLA-C-202ENST00000376237 DHHO43323 396 aa20.24■□□□□ 0.83
HLA-C-202ENST00000376237 CD8BP10966 210 aa20.24■□□□□ 0.83
HLA-C-202ENST00000376237 MTNR1AP48039 350 aa20.24■□□□□ 0.83
HLA-C-202ENST00000376237 ZNF84P51523 738 aa20.24■□□□□ 0.83
HLA-C-202ENST00000376237 SMN1Q16637 294 aaKnown RBP20.24■□□□□ 0.83
HLA-C-202ENST00000376237 PHYHD1Q5SRE7 291 aa20.24■□□□□ 0.83
HLA-C-202ENST00000376237 NAXEQ8NCW5 288 aa20.24■□□□□ 0.83
HLA-C-202ENST00000376237 BPIFB6Q8NFQ5 453 aa20.24■□□□□ 0.83
HLA-C-202ENST00000376237 STARD4Q96DR4 205 aa20.24■□□□□ 0.83
HLA-C-202ENST00000376237 CRLF2Q9HC73 371 aa20.24■□□□□ 0.83
HLA-C-202ENST00000376237 MALT1Q9UDY8 824 aa20.24■□□□□ 0.83
HLA-C-202ENST00000376237 BLOC1S6Q9UL45 172 aa20.24■□□□□ 0.83
HLA-C-202ENST00000376237 PROCRQ9UNN8 238 aa20.24■□□□□ 0.83
HLA-C-202ENST00000376237 PYCR1P32322 319 aa20.23■□□□□ 0.83
HLA-C-202ENST00000376237 GUCA1AP43080 201 aaPredicted RBP20.23■□□□□ 0.83
HLA-C-202ENST00000376237 POU4F2Q12837 409 aa20.23■□□□□ 0.83
HLA-C-202ENST00000376237 SOWAHCQ53LP3 525 aaPredicted RBP20.23■□□□□ 0.83
HLA-C-202ENST00000376237 LINC01590Q5TEZ4 76 aa20.23■□□□□ 0.83
HLA-C-202ENST00000376237 VWA1Q6PCB0 445 aa20.23■□□□□ 0.83
HLA-C-202ENST00000376237 UGT2A3Q6UWM9 527 aa20.23■□□□□ 0.83
HLA-C-202ENST00000376237 TFAP2EQ6VUC0 442 aa20.23■□□□□ 0.83
HLA-C-202ENST00000376237 GLB1L2Q8IW92 636 aa20.23■□□□□ 0.83
HLA-C-202ENST00000376237 UBE2J2Q8N2K1 259 aa20.23■□□□□ 0.83
HLA-C-202ENST00000376237 OR6K6Q8NGW6 343 aa20.23■□□□□ 0.83
HLA-C-202ENST00000376237 NSMAFQ92636 917 aa20.23■□□□□ 0.83
HLA-C-202ENST00000376237 NR1H4Q96RI1 486 aaPredicted RBP20.23■□□□□ 0.83
HLA-C-202ENST00000376237 COA3Q9Y2R0 106 aaPredicted RBP20.23■□□□□ 0.83
HLA-C-202ENST00000376237 TPRKBQ9Y3C4 175 aa20.23■□□□□ 0.83
HLA-C-202ENST00000376237 ALPK2Q86TB3 2170 aa20.23■□□□□ 0.83
HLA-C-202ENST00000376237 IGKV1D-43A0A0B4J1Z2 117 aa20.22■□□□□ 0.83
HLA-C-202ENST00000376237 A0A1B0GUH1 482 aa20.22■□□□□ 0.83
HLA-C-202ENST00000376237 CCDC182A6NF36 153 aa20.22■□□□□ 0.83
HLA-C-202ENST00000376237 ZNF587BE7ETH6 402 aa20.22■□□□□ 0.83
HLA-C-202ENST00000376237 SLC1A7O00341 560 aa20.22■□□□□ 0.83
HLA-C-202ENST00000376237 CCL21O00585 134 aa20.22■□□□□ 0.83
HLA-C-202ENST00000376237 PRB1P04280 392 aa20.22■□□□□ 0.83
HLA-C-202ENST00000376237 DBTP11182 482 aaKnown RBP20.22■□□□□ 0.83
HLA-C-202ENST00000376237 EDNRAP25101 427 aa20.22■□□□□ 0.83
HLA-C-202ENST00000376237 NUDT6P53370 316 aa20.22■□□□□ 0.83
HLA-C-202ENST00000376237 ROR2Q01974 943 aaKnown RBP20.22■□□□□ 0.83
HLA-C-202ENST00000376237 ZNF91Q05481 1191 aa20.22■□□□□ 0.83
HLA-C-202ENST00000376237 ETFDHQ16134 617 aa20.22■□□□□ 0.83
HLA-C-202ENST00000376237 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.22■□□□□ 0.83
HLA-C-202ENST00000376237 BTLAQ7Z6A9 289 aa20.22■□□□□ 0.83
HLA-C-202ENST00000376237 OR51L1Q8NGJ5 315 aa20.22■□□□□ 0.83
HLA-C-202ENST00000376237 ALKBH3Q96Q83 286 aaPredicted RBP20.22■□□□□ 0.83
HLA-C-202ENST00000376237 RBM24Q9BX46 236 aaKnown RBP20.22■□□□□ 0.83
HLA-C-202ENST00000376237 PIGMQ9H3S5 423 aa20.22■□□□□ 0.83
HLA-C-202ENST00000376237 GPR35Q9HC97 309 aa20.22■□□□□ 0.83
HLA-C-202ENST00000376237 AMBNQ9NP70 447 aa20.22■□□□□ 0.83
HLA-C-202ENST00000376237 MRPS18AQ9NVS2 196 aaKnown RBP20.22■□□□□ 0.83
HLA-C-202ENST00000376237 MED12LQ86YW9 2145 aa20.22■□□□□ 0.83
HLA-C-202ENST00000376237 A0A0G2JNJ9 132 aa20.22■□□□□ 0.83
HLA-C-202ENST00000376237 IRGMA1A4Y4 181 aa20.22■□□□□ 0.83
HLA-C-202ENST00000376237 FAM20BO75063 409 aa20.22■□□□□ 0.83
HLA-C-202ENST00000376237 CGAP01215 116 aa20.22■□□□□ 0.83
HLA-C-202ENST00000376237 IGHV3-9P01782 118 aa20.22■□□□□ 0.83
HLA-C-202ENST00000376237 LAP3P28838 519 aa20.22■□□□□ 0.83
HLA-C-202ENST00000376237 GSTT1P30711 240 aa20.22■□□□□ 0.83
HLA-C-202ENST00000376237 CHN2P52757 468 aa20.22■□□□□ 0.83
HLA-C-202ENST00000376237 HSF2Q03933 536 aa20.22■□□□□ 0.83
HLA-C-202ENST00000376237 GGTLC2Q14390 218 aa20.22■□□□□ 0.83
HLA-C-202ENST00000376237 KLHL22Q53GT1 634 aa20.22■□□□□ 0.83
HLA-C-202ENST00000376237 ZNRF4Q8WWF5 429 aa20.22■□□□□ 0.83
HLA-C-202ENST00000376237 KISS1RQ969F8 398 aaPredicted RBP20.22■□□□□ 0.83
HLA-C-202ENST00000376237 CNOT2Q9NZN8 540 aaKnown RBP20.22■□□□□ 0.83
HLA-C-202ENST00000376237 Q9UFV3 132 aa20.22■□□□□ 0.83
HLA-C-202ENST00000376237 PRSS50Q9UI38 385 aa20.22■□□□□ 0.83
HLA-C-202ENST00000376237 MYRFQ9Y2G1 1151 aa20.22■□□□□ 0.83
HLA-C-202ENST00000376237 POLEQ07864 2286 aa20.21■□□□□ 0.83
HLA-C-202ENST00000376237 DOCK7Q96N67 2140 aa20.21■□□□□ 0.83
HLA-C-202ENST00000376237 ARHGAP21Q5T5U3 1957 aa20.21■□□□□ 0.83
HLA-C-202ENST00000376237 EFCAB10A6NFE3 127 aa20.21■□□□□ 0.83
HLA-C-202ENST00000376237 CRHBPP24387 322 aa20.21■□□□□ 0.83
HLA-C-202ENST00000376237 SLC15A1P46059 708 aa20.21■□□□□ 0.83
HLA-C-202ENST00000376237 FAPQ12884 760 aa20.21■□□□□ 0.83
HLA-C-202ENST00000376237 CEACAM16Q2WEN9 425 aa20.21■□□□□ 0.83
HLA-C-202ENST00000376237 Q6ZT83 130 aa20.21■□□□□ 0.83
HLA-C-202ENST00000376237 ZMYND19Q96E35 227 aaPredicted RBP20.21■□□□□ 0.83
HLA-C-202ENST00000376237 RNFT2Q96EX2 444 aa20.21■□□□□ 0.83
HLA-C-202ENST00000376237 PSORS1C1Q9UIG5 152 aa20.21■□□□□ 0.83
HLA-C-202ENST00000376237 FAM171A2A8MVW0 826 aa20.2■□□□□ 0.82
HLA-C-202ENST00000376237 DVL2O14641 736 aa20.2■□□□□ 0.82
HLA-C-202ENST00000376237 XPNPEP2O43895 674 aa20.2■□□□□ 0.82
HLA-C-202ENST00000376237 HLA-DQA2P01906 255 aa20.2■□□□□ 0.82
HLA-C-202ENST00000376237 HRGP04196 525 aa20.2■□□□□ 0.82
HLA-C-202ENST00000376237 PIPP12273 146 aaPredicted RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms