RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 TMPRSS12Q86WS5 348 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 PM20D2Q8IYS1 436 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 DND1Q8IYX4 353 aaKnown RBP11.04□□□□□ -0.64
UBR4-203ENST00000375225 OR4D9Q8NGE8 314 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 OR5L2Q8NGL0 311 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 OR2I1PQ8NGU4 316 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 GPR119Q8TDV5 335 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 ZNF431Q8TF32 576 aaPredicted RBP11.04□□□□□ -0.64
UBR4-203ENST00000375225 DDIT4LQ96D03 193 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 TSSK2Q96PF2 358 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 C20orf85Q9H1P6 137 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 SDHAF3Q9NRP4 125 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 FGF21Q9NSA1 209 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 FOXJ3Q9UPW0 622 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 CABIN1Q9Y6J0 2220 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 ARID1BQ8NFD5 2236 aaPredicted RBP11.04□□□□□ -0.64
UBR4-203ENST00000375225 A0A0B4J203 849 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 LY6G6EA0A0G2JKS1 128 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 MEGF11A6BM72 1044 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 PSMD9O00233 223 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 ZNF593O00488 134 aaPredicted RBP11.04□□□□□ -0.64
UBR4-203ENST00000375225 FADS1O60427 444 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 ZNF780AO75290 641 aaPredicted RBP11.04□□□□□ -0.64
UBR4-203ENST00000375225 AKR7A3O95154 331 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 HEXBP07686 556 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 CYC1P08574 325 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 CSF1P09603 554 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 FOLR1P15328 257 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 ZNF823P16415 610 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 MSX1P28360 303 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 ZP4Q12836 540 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 SLC17A1Q14916 467 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 ACKR1Q16570 336 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 GSG1Q2KHT4 349 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 RNASE12Q5GAN4 147 aaKnown RBP11.04□□□□□ -0.64
UBR4-203ENST00000375225 VWA2Q5GFL6 755 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 GLT8D1Q68CQ7 371 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 RHBDD2Q6NTF9 364 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 PWWP2BQ6NUJ5 590 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 POMZP3Q6PJE2 187 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 LRRTM1Q86UE6 522 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 NUBPLQ8TB37 319 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 ZNF519Q8TB69 540 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 IFI44Q8TCB0 444 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 RNF128Q8TEB7 428 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 GIMAP1Q8WWP7 306 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 RGP1Q92546 391 aaPredicted RBP11.04□□□□□ -0.64
UBR4-203ENST00000375225 ZNF501Q96CX3 271 aaPredicted RBP11.04□□□□□ -0.64
UBR4-203ENST00000375225 MED30Q96HR3 178 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 RADILQ96JH8 1075 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 C4orf45Q96LM5 186 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 NUDT22Q9BRQ3 303 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 ELOVL3Q9HB03 270 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 HRASLSQ9HDD0 168 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 TAS2R5Q9NYW4 299 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 OR5V1Q9UGF6 321 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 SCP2D1Q9UJQ7 156 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 HSPB11Q9Y547 144 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 R4GN57 208 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 U3KQA8 63 aa11.04□□□□□ -0.64
UBR4-203ENST00000375225 ADAMTS20P59510 1910 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 A0A1B0GUH1 482 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 ANKRD20A5PA0PJZ0 165 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 IDSB3KWA1 339 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 NPIPA5E9PKD4 350 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 H7C1C5 153 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 PLPP3O14495 311 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 XRCC3O43542 346 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 SLC16A7O60669 478 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 NPIPB7O75200 414 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 RBBP9O75884 186 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 ALX3O95076 343 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 MT-ND4P03905 459 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 ANKRD34CP0C6C1 535 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 SOX2P48431 317 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 TAS2R20P59543 309 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 GNG2P59768 71 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 LCN6P62502 163 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 RNF4P78317 190 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 ROM1Q03395 351 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 CFHR1Q03591 330 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 TOMM34Q15785 309 aaPredicted RBP11.03□□□□□ -0.64
UBR4-203ENST00000375225 RAB11BQ15907 218 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 C1orf189Q5VU69 101 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 HDDC2Q7Z4H3 204 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 SYT9Q86SS6 491 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 FAM109AQ8N4B1 249 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 OR8K3Q8NH51 312 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 MFSD8Q8NHS3 518 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 TTC9Q92623 222 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 TMEM106AQ96A25 262 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 NXPE2Q96DL1 559 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 PTDSS2Q9BVG9 487 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 TSPAN10Q9H1Z9 355 aaPredicted RBP11.03□□□□□ -0.64
UBR4-203ENST00000375225 PLSCR3Q9NRY6 295 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 C19orf25Q9UFG5 118 aaPredicted RBP11.03□□□□□ -0.64
UBR4-203ENST00000375225 NPIPA1Q9UND3 350 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 DHDHQ9UQ10 334 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 RCE1Q9Y256 329 aa11.03□□□□□ -0.64
UBR4-203ENST00000375225 KLHDC2Q9Y2U9 406 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms