RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 TMEM225BP0DP42 221 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 GABRB1P18505 474 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 ATF1P18846 271 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 NPR2P20594 1047 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 SMCO1Q147U7 214 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 CDK5R1Q15078 307 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 C1orf140Q5VVS0 124 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 ELP2Q6IA86 826 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 WDR88Q6ZMY6 472 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 DCXRQ7Z4W1 244 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 UBALD2Q8IYN6 164 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 SLC25A45Q8N413 288 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 ASB12Q8WXK4 309 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 KCTD12Q96CX2 325 aaKnown RBP7.09□□□□□ -1.27
HERC4-202ENST00000373700 AICDAQ9GZX7 198 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 ERVMER34-1Q9H9K5 563 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 UBQLN2Q9UHD9 624 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 PADI1Q9ULC6 663 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 NPFFR2Q9Y5X5 522 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 A0A0B4J2E0 115 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 A0A1B0GX12 115 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 DISC1C4P0D8 188 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 NUDT21O43809 227 aaKnown RBP7.09□□□□□ -1.27
HERC4-202ENST00000373700 ZNF28P17035 718 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 EVI2BP34910 448 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 CASRP41180 1078 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 ETV6P41212 452 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 ARPC4P59998 168 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 CDC20Q12834 499 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 PRTGQ2VWP7 1150 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 ALKAL2Q6UX46 152 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 C1orf210Q8IVY1 113 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 CADM4Q8NFZ8 388 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 OR4D9Q8NGE8 314 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 FGGYQ96C11 551 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 ZNF578Q96N58 590 aaPredicted RBP7.09□□□□□ -1.27
HERC4-202ENST00000373700 DCLRE1CQ96SD1 692 aaKnown RBP7.09□□□□□ -1.27
HERC4-202ENST00000373700 MIXL1Q9H2W2 232 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 OR51B6Q9H340 312 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 OCIAD1Q9NX40 245 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 PLEK2Q9NYT0 353 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 KLHL13Q9P2N7 655 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 FBXL2Q9UKC9 423 aa7.09□□□□□ -1.27
HERC4-202ENST00000373700 SIRT4Q9Y6E7 314 aaPredicted RBP7.09□□□□□ -1.27
HERC4-202ENST00000373700 TRAV36DV7A0A075B6V5 113 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 TRIM64A6NGJ6 449 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 PEX14O75381 377 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 NKX2-2O95096 273 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 CDK10Q15131 360 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 GRK1Q15835 563 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 TMEM201Q5SNT2 666 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 FAM69AQ5T7M9 428 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 METTL11BQ5VVY1 283 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.08□□□□□ -1.28
HERC4-202ENST00000373700 OR14A16Q8NHC5 309 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 SMIM19Q96E16 107 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 SLC41A2Q96JW4 573 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 SNX18Q96RF0 628 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 ABHD1Q96SE0 405 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 DNAJB12Q9NXW2 375 aaKnown RBP7.08□□□□□ -1.28
HERC4-202ENST00000373700 ABI3Q9P2A4 366 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 RHBDD3Q9Y3P4 386 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 AKAP6Q13023 2319 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 LILRA5A6NI73 299 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 CYR61O00622 381 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 FOXS1O43638 330 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 ZFPL1O95159 310 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 APOC3P02656 99 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 AMY2BP19961 511 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 CDK2P24941 298 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 PPICP45877 212 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 EEF1A1P68104 462 aaKnown RBP7.08□□□□□ -1.28
HERC4-202ENST00000373700 IRF3Q14653 427 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 CD226Q15762 336 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 ABCA11PQ4W5N1 156 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 SPIN3Q5JUX0 258 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 ABHD17BQ5VST6 288 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 TMEM71Q6P5X7 295 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 TMPRSS11FQ6ZWK6 438 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 RAB11FIP2Q7L804 512 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 SSX6Q7RTT6 188 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 CCDC28AQ8IWP9 274 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 BATF2Q8N1L9 274 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 OR56B4Q8NH76 319 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 HSD17B8Q92506 261 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 KIAA1143Q96AT1 154 aaPredicted RBP7.08□□□□□ -1.28
HERC4-202ENST00000373700 ANKRD9Q96BM1 317 aaPredicted RBP7.08□□□□□ -1.28
HERC4-202ENST00000373700 C3orf49Q96BT1 292 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 SFXN2Q96NB2 322 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 PARPBPQ9NWS1 579 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 DOCK7Q96N67 2140 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 SPTBN1Q01082 2364 aaKnown RBP7.08□□□□□ -1.28
HERC4-202ENST00000373700 PRRC2CQ9Y520 2896 aaKnown RBP7.08□□□□□ -1.28
HERC4-202ENST00000373700 A0A0A6YYJ9 748 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 SLC43A1O75387 559 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 RP2O75695 350 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 MSL3P1P0C860 447 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 EPXP11678 715 aa7.08□□□□□ -1.28
HERC4-202ENST00000373700 ENDOUP21128 410 aaKnown RBP7.08□□□□□ -1.28
HERC4-202ENST00000373700 DCTDP32321 178 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms