RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 PURGQ9UJV8 347 aaKnown RBP12.43□□□□□ -0.42
USP49-201ENST00000373006 A0A087WV62 115 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 KANTRA0A1W2PQU2 76 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 TMEM82A0PJX8 343 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 S100A6P06703 90 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 CCKBRP32239 447 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 MNDAP41218 407 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 MAP3K8P41279 467 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 EXOSC6Q5RKV6 272 aaKnown RBP12.42□□□□□ -0.42
USP49-201ENST00000373006 HEATR5AQ86XA9 2040 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 GALNT16Q8N428 558 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 PLPP7Q8NBV4 271 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 OR1J2Q8NGS2 313 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 OR2G2Q8NGZ5 317 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 NT5CQ8TCD5 201 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 VRK1Q99986 396 aaPredicted RBP12.42□□□□□ -0.42
USP49-201ENST00000373006 LRIT1Q9P2V4 623 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 PCOLCE2Q9UKZ9 415 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 OR4C45A6NMZ5 311 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 ZNF705EA8MWA4 302 aaPredicted RBP12.42□□□□□ -0.42
USP49-201ENST00000373006 OR10H2O60403 315 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 FARS2O95363 451 aaKnown RBP12.42□□□□□ -0.42
USP49-201ENST00000373006 LINC00271P0C7V0 271 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 UBBP0CG47 229 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 UBCP0CG48 685 aaKnown RBP12.42□□□□□ -0.42
USP49-201ENST00000373006 RPS27AP62979 156 aaKnown RBP12.42□□□□□ -0.42
USP49-201ENST00000373006 UBA52P62987 128 aaKnown RBP12.42□□□□□ -0.42
USP49-201ENST00000373006 RBM39Q14498 530 aaKnown RBP12.42□□□□□ -0.42
USP49-201ENST00000373006 JMJD6Q6NYC1 403 aaPredicted RBP12.42□□□□□ -0.42
USP49-201ENST00000373006 MOB3CQ70IA8 216 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 OR2W3Q7Z3T1 314 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 TMEM17Q86X19 198 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 GABRG1Q8N1C3 465 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 CLEC1AQ8NC01 280 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 OR4C3Q8NH37 302 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 OR14C36Q8NHC7 312 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 THAP6Q8TBB0 222 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 TSEN15Q8WW01 171 aaKnown RBP12.42□□□□□ -0.42
USP49-201ENST00000373006 TM4SF19Q96DZ7 209 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 DNTTIP1Q9H147 329 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 ASF1BQ9NVP2 202 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 PILRAQ9UKJ1 303 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 EML5Q05BV3 1969 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 TRBV5-5A0A0J9YX44 114 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 A0A1B0GTQ1 180 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 ELOA3DA6NLF2 546 aaPredicted RBP12.42□□□□□ -0.42
USP49-201ENST00000373006 MPTX1A8MV57 137 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 GPR89AB7ZAQ6 455 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 CYR61O00622 381 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 ABCD4O14678 606 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 ARPC3O15145 178 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 ALOX12BO75342 701 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 SLC25A12O75746 678 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 NKX2-2O95096 273 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 RAB3DO95716 219 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 AMY2AP04746 511 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 GPR89BP0CG08 455 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 CSRP1P21291 193 aaKnown RBP12.42□□□□□ -0.42
USP49-201ENST00000373006 CSF2RBP32927 897 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 CTXN1P60606 82 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 NR0B2Q15466 257 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 MPPED2Q15777 294 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 ELOA3BQ3SY89 546 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 UNQ6126/PRO20091Q6UXV3 157 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 SLC16A9Q7RTY1 509 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 PRSS35Q8N3Z0 413 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 ELOA3Q8NG57 546 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 OR1S2Q8NGQ3 325 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 FAM3DQ96BQ1 224 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 SPACA7Q96KW9 195 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 MOGAT1Q96PD6 335 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 AMELYQ99218 206 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 BIN3Q9NQY0 253 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 DCAF16Q9NXF7 216 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 SLC17A4Q9Y2C5 497 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 PLEKHA6Q9Y2H5 1048 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 TICRRQ7Z2Z1 1910 aa12.42□□□□□ -0.42
USP49-201ENST00000373006 A0A087WUJ7 227 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 A0A1B0GW55 424 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 A0A1W2PQU0 124 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 H0YGG7 62 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 GMFGO60234 142 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 GP1BAP07359 652 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 DUX4L2P0CJ85 424 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 DUX4L3P0CJ86 424 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 DUX4L4P0CJ87 422 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 DUX4L5P0CJ88 424 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 DUX4L6P0CJ89 424 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 DUX4L7P0CJ90 424 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 RNF224P0DH78 156 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 ARF3P61204 181 aaPredicted RBP12.41□□□□□ -0.42
USP49-201ENST00000373006 NKPD1Q17RQ9 610 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 FAM78AQ5JUQ0 283 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 FCRL6Q6DN72 434 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 ABHD13Q7L211 337 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 ZNF784Q8NCA9 323 aaPredicted RBP12.41□□□□□ -0.42
USP49-201ENST00000373006 LRFN5Q96NI6 719 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 COMMD4Q9H0A8 199 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 KIR3DX1Q9H7L2 352 aa12.41□□□□□ -0.42
USP49-201ENST00000373006 CERS4Q9HA82 394 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms