RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 B4DSR2 109 aa11.23□□□□□ -0.61
RPF1-201ENST00000370654 PPIHO43447 177 aaKnown RBP11.23□□□□□ -0.61
RPF1-201ENST00000370654 PIP5K1CO60331 668 aa11.23□□□□□ -0.61
RPF1-201ENST00000370654 RGS9O75916 674 aaPredicted RBP11.23□□□□□ -0.61
RPF1-201ENST00000370654 OR7A10O76100 309 aa11.23□□□□□ -0.61
RPF1-201ENST00000370654 GAAP10253 952 aa11.23□□□□□ -0.61
RPF1-201ENST00000370654 SAGP10523 405 aaPredicted RBP11.23□□□□□ -0.61
RPF1-201ENST00000370654 ZNF250P15622 560 aa11.23□□□□□ -0.61
RPF1-201ENST00000370654 OR1E2P47887 323 aa11.23□□□□□ -0.61
RPF1-201ENST00000370654 CCL8P80075 99 aa11.23□□□□□ -0.61
RPF1-201ENST00000370654 FMODQ06828 376 aa11.23□□□□□ -0.61
RPF1-201ENST00000370654 LAPTM4AQ15012 233 aa11.23□□□□□ -0.61
RPF1-201ENST00000370654 ARMC4Q5T2S8 1044 aa11.23□□□□□ -0.61
RPF1-201ENST00000370654 SLC16A14Q7RTX9 510 aa11.23□□□□□ -0.61
RPF1-201ENST00000370654 NANOGNBQ7Z5D8 188 aa11.23□□□□□ -0.61
RPF1-201ENST00000370654 SNX32Q86XE0 403 aa11.23□□□□□ -0.61
RPF1-201ENST00000370654 MEX3DQ86XN8 651 aaKnown RBP11.23□□□□□ -0.61
RPF1-201ENST00000370654 RFLNBQ8N5W9 214 aa11.23□□□□□ -0.61
RPF1-201ENST00000370654 NOXO1Q8NFA2 376 aa11.23□□□□□ -0.61
RPF1-201ENST00000370654 SLC26A7Q8TE54 656 aa11.23□□□□□ -0.61
RPF1-201ENST00000370654 HDAC2Q92769 488 aaKnown RBP11.23□□□□□ -0.61
RPF1-201ENST00000370654 NABP1Q96AH0 204 aa11.23□□□□□ -0.61
RPF1-201ENST00000370654 MPP4Q96JB8 637 aa11.23□□□□□ -0.61
RPF1-201ENST00000370654 SLC19A3Q9BZV2 496 aa11.23□□□□□ -0.61
RPF1-201ENST00000370654 METTL17Q9H7H0 456 aaPredicted RBP11.23□□□□□ -0.61
RPF1-201ENST00000370654 HIF1ANQ9NWT6 349 aa11.23□□□□□ -0.61
RPF1-201ENST00000370654 A0A0G2JND7 137 aa11.22□□□□□ -0.61
RPF1-201ENST00000370654 C17orf100A8MU93 164 aa11.22□□□□□ -0.61
RPF1-201ENST00000370654 TCF21O43680 179 aa11.22□□□□□ -0.61
RPF1-201ENST00000370654 MGRN1O60291 552 aa11.22□□□□□ -0.61
RPF1-201ENST00000370654 IGHG1P01857 330 aa11.22□□□□□ -0.61
RPF1-201ENST00000370654 MT-ND1P03886 318 aa11.22□□□□□ -0.61
RPF1-201ENST00000370654 HIST1H2ABP04908 130 aa11.22□□□□□ -0.61
RPF1-201ENST00000370654 LCKP06239 509 aa11.22□□□□□ -0.61
RPF1-201ENST00000370654 TSPAN19P0C672 248 aa11.22□□□□□ -0.61
RPF1-201ENST00000370654 ACADSP16219 412 aa11.22□□□□□ -0.61
RPF1-201ENST00000370654 WNT5AP41221 380 aa11.22□□□□□ -0.61
RPF1-201ENST00000370654 ZNF133P52736 654 aaPredicted RBP11.22□□□□□ -0.61
RPF1-201ENST00000370654 UCP2P55851 309 aa11.22□□□□□ -0.61
RPF1-201ENST00000370654 CLRN1P58418 232 aa11.22□□□□□ -0.61
RPF1-201ENST00000370654 RPS23P62266 143 aaKnown RBP11.22□□□□□ -0.61
RPF1-201ENST00000370654 NKPD1Q17RQ9 610 aa11.22□□□□□ -0.61
RPF1-201ENST00000370654 SPRNQ5BIV9 151 aa11.22□□□□□ -0.61
RPF1-201ENST00000370654 LCE2DQ5TA82 110 aaPredicted RBP11.22□□□□□ -0.61
RPF1-201ENST00000370654 LIPNQ5VXI9 398 aa11.22□□□□□ -0.61
RPF1-201ENST00000370654 THSD4Q6ZMP0 1018 aa11.22□□□□□ -0.61
RPF1-201ENST00000370654 HIST3H2AQ7L7L0 130 aa11.22□□□□□ -0.61
RPF1-201ENST00000370654 ZNF101Q8IZC7 436 aa11.22□□□□□ -0.61
RPF1-201ENST00000370654 ICA1LQ8NDH6 482 aa11.22□□□□□ -0.61
RPF1-201ENST00000370654 TSPEARQ8WU66 669 aa11.22□□□□□ -0.61
RPF1-201ENST00000370654 HIST1H2ACQ93077 130 aa11.22□□□□□ -0.61
RPF1-201ENST00000370654 TMEM186Q96B77 213 aa11.22□□□□□ -0.61
RPF1-201ENST00000370654 CDH20Q9HBT6 801 aa11.22□□□□□ -0.61
RPF1-201ENST00000370654 HINT3Q9NQE9 182 aaKnown RBP11.22□□□□□ -0.61
RPF1-201ENST00000370654 RIMS3Q9UJD0 308 aa11.22□□□□□ -0.61
RPF1-201ENST00000370654 LOC100509620A0A075B734 347 aa11.21□□□□□ -0.61
RPF1-201ENST00000370654 MSMBP08118 114 aa11.21□□□□□ -0.61
RPF1-201ENST00000370654 MPV17P39210 176 aa11.21□□□□□ -0.61
RPF1-201ENST00000370654 TMEM33P57088 247 aa11.21□□□□□ -0.61
RPF1-201ENST00000370654 MVKQ03426 396 aa11.21□□□□□ -0.61
RPF1-201ENST00000370654 PABPC1L2AQ5JQF8 200 aa11.21□□□□□ -0.61
RPF1-201ENST00000370654 SPATA46Q5T0L3 261 aa11.21□□□□□ -0.61
RPF1-201ENST00000370654 CGB2Q6NT52 195 aa11.21□□□□□ -0.61
RPF1-201ENST00000370654 TMEM53Q6P2H8 277 aa11.21□□□□□ -0.61
RPF1-201ENST00000370654 GLCCI1Q86VQ1 547 aa11.21□□□□□ -0.61
RPF1-201ENST00000370654 SLC30A8Q8IWU4 369 aa11.21□□□□□ -0.61
RPF1-201ENST00000370654 RBM15BQ8NDT2 890 aaKnown RBP11.21□□□□□ -0.61
RPF1-201ENST00000370654 SEMA6DQ8NFY4 1073 aa11.21□□□□□ -0.61
RPF1-201ENST00000370654 AKR7LQ8NHP1 331 aa11.21□□□□□ -0.61
RPF1-201ENST00000370654 SYNPRQ8TBG9 265 aa11.21□□□□□ -0.61
RPF1-201ENST00000370654 NSMAFQ92636 917 aa11.21□□□□□ -0.61
RPF1-201ENST00000370654 LRRC58Q96CX6 371 aa11.21□□□□□ -0.61
RPF1-201ENST00000370654 SGTBQ96EQ0 304 aa11.21□□□□□ -0.61
RPF1-201ENST00000370654 ZNF583Q96ND8 569 aa11.21□□□□□ -0.61
RPF1-201ENST00000370654 LRRC37BQ96QE4 947 aa11.21□□□□□ -0.61
RPF1-201ENST00000370654 TMEM120AQ9BXJ8 343 aa11.21□□□□□ -0.61
RPF1-201ENST00000370654 OCEL1Q9H607 264 aa11.21□□□□□ -0.61
RPF1-201ENST00000370654 INIPQ9NRY2 104 aa11.21□□□□□ -0.61
RPF1-201ENST00000370654 FBXL3Q9UKT7 428 aa11.21□□□□□ -0.61
RPF1-201ENST00000370654 NBEAL1Q6ZS30 2694 aa11.2□□□□□ -0.62
RPF1-201ENST00000370654 ARHGAP32A7KAX9 2087 aa11.2□□□□□ -0.62
RPF1-201ENST00000370654 DEAF1O75398 565 aaPredicted RBP11.2□□□□□ -0.62
RPF1-201ENST00000370654 FARS2O95363 451 aaKnown RBP11.2□□□□□ -0.62
RPF1-201ENST00000370654 SNAP29O95721 258 aa11.2□□□□□ -0.62
RPF1-201ENST00000370654 SCG5P05408 212 aa11.2□□□□□ -0.62
RPF1-201ENST00000370654 ZNF32P17041 273 aa11.2□□□□□ -0.62
RPF1-201ENST00000370654 CCNOP22674 350 aa11.2□□□□□ -0.62
RPF1-201ENST00000370654 KLF3P57682 345 aaPredicted RBP11.2□□□□□ -0.62
RPF1-201ENST00000370654 TAS2R41P59536 307 aa11.2□□□□□ -0.62
RPF1-201ENST00000370654 MRPS11P82912 194 aaKnown RBP11.2□□□□□ -0.62
RPF1-201ENST00000370654 FHL1Q13642 323 aa11.2□□□□□ -0.62
RPF1-201ENST00000370654 TSTQ16762 297 aaKnown RBP11.2□□□□□ -0.62
RPF1-201ENST00000370654 TBC1D28Q2M2D7 210 aa11.2□□□□□ -0.62
RPF1-201ENST00000370654 SLC36A2Q495M3 483 aa11.2□□□□□ -0.62
RPF1-201ENST00000370654 C10orf128Q5T292 105 aa11.2□□□□□ -0.62
RPF1-201ENST00000370654 INTS11Q5TA45 600 aaKnown RBP11.2□□□□□ -0.62
RPF1-201ENST00000370654 REP15Q6BDI9 236 aa11.2□□□□□ -0.62
RPF1-201ENST00000370654 SLC25A47Q6Q0C1 308 aa11.2□□□□□ -0.62
RPF1-201ENST00000370654 ZNF771Q7L3S4 317 aaPredicted RBP11.2□□□□□ -0.62
RPF1-201ENST00000370654 IGFN1Q86VF2 1251 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms