RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 OR2L5Q8NG80 312 aa3.48□□□□□ -1.85
MCF2-203ENST00000370576 OR1M1Q8NGA1 313 aa3.48□□□□□ -1.85
MCF2-203ENST00000370576 TFAP2CQ92754 450 aa3.48□□□□□ -1.85
MCF2-203ENST00000370576 UBE2E3Q969T4 207 aa3.48□□□□□ -1.85
MCF2-203ENST00000370576 BSCL2Q96G97 398 aaPredicted RBP3.48□□□□□ -1.85
MCF2-203ENST00000370576 TGM7Q96PF1 710 aa3.48□□□□□ -1.85
MCF2-203ENST00000370576 NANOGQ9H9S0 305 aa3.48□□□□□ -1.85
MCF2-203ENST00000370576 ELOVL3Q9HB03 270 aa3.48□□□□□ -1.85
MCF2-203ENST00000370576 P2RX2Q9UBL9 471 aa3.48□□□□□ -1.85
MCF2-203ENST00000370576 POMT2Q9UKY4 750 aa3.48□□□□□ -1.85
MCF2-203ENST00000370576 B3GALT5Q9Y2C3 310 aa3.48□□□□□ -1.85
MCF2-203ENST00000370576 RNF11Q9Y3C5 154 aa3.48□□□□□ -1.85
MCF2-203ENST00000370576 CHST2Q9Y4C5 530 aa3.48□□□□□ -1.85
MCF2-203ENST00000370576 ANTXRLA6NF34 631 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 C9JVG2 144 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 TMX2-CTNND1H3BSU7 103 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 J3QRE1 110 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 NTN3O00634 580 aaPredicted RBP3.47□□□□□ -1.85
MCF2-203ENST00000370576 PLPP1O14494 284 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 CFLARO15519 480 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 GATBO75879 557 aaKnown RBP3.47□□□□□ -1.85
MCF2-203ENST00000370576 GHRHP01286 108 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 FOLR1P15328 257 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 PAICSP22234 425 aaKnown RBP3.47□□□□□ -1.85
MCF2-203ENST00000370576 PPIBP23284 216 aaKnown RBP3.47□□□□□ -1.85
MCF2-203ENST00000370576 CFPP27918 469 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 EPHA3P29320 983 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 IFNA8P32881 189 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 GDNFP39905 211 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 GNPDA1P46926 289 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 CDK9P50750 372 aaKnown RBP3.47□□□□□ -1.85
MCF2-203ENST00000370576 TBPL1P62380 186 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 DNASE1L3Q13609 305 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 FHL1Q13642 323 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 CRMP1Q14194 572 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 ANGPT1Q15389 498 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 MRPL23Q16540 153 aaKnown RBP3.47□□□□□ -1.85
MCF2-203ENST00000370576 SYPL1Q16563 259 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 HLA-BQ31612 363 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 ACCSLQ4AC99 568 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 PHF19Q5T6S3 580 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 C1orf94Q6P1W5 598 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 BHLHB9Q6PI77 547 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 WDR74Q6RFH5 385 aaPredicted RBP3.47□□□□□ -1.85
MCF2-203ENST00000370576 ZNF474Q6S9Z5 364 aaPredicted RBP3.47□□□□□ -1.85
MCF2-203ENST00000370576 PRSS45Q7RTY3 260 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 FAM19A1Q7Z5A9 133 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 LDLRAD3Q86YD5 345 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 BOD1L2Q8IYS8 172 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 C1orf87Q8N0U7 546 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 CYP4Z2PQ8N1L4 340 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 OR2L13Q8N349 312 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 NEIL2Q969S2 332 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 ZNF775Q96BV0 537 aaPredicted RBP3.47□□□□□ -1.85
MCF2-203ENST00000370576 MS4A6EQ96DS6 147 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 LOXL4Q96JB6 756 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 RPL10LQ96L21 214 aaKnown RBP3.47□□□□□ -1.85
MCF2-203ENST00000370576 IKZF5Q9H5V7 419 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 AP5S1Q9NUS5 200 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 TAAR2Q9P1P5 351 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 NLKQ9UBE8 527 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 UPB1Q9UBR1 384 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 C3orf18Q9UK00 162 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 OR10H1Q9Y4A9 318 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 KMT2BQ9UMN6 2715 aaPredicted RBP3.47□□□□□ -1.85
MCF2-203ENST00000370576 IGLV3-32A0A0A0MS00 114 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 SRRM4A7MD48 611 aaKnown RBP3.47□□□□□ -1.85
MCF2-203ENST00000370576 RRASP10301 218 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 ENGP17813 658 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 COMPP49747 757 aaPredicted RBP3.47□□□□□ -1.85
MCF2-203ENST00000370576 GABARAPL2P60520 117 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 IRX4P78413 519 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 KLC1Q07866 573 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 FASTKQ14296 549 aaKnown RBP3.47□□□□□ -1.85
MCF2-203ENST00000370576 TATDN3Q17R31 274 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 OTUD3Q5T2D3 398 aaPredicted RBP3.47□□□□□ -1.85
MCF2-203ENST00000370576 SERTAD4-AS1Q5TG53 156 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 SLX4IPQ5VYV7 408 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 TCTN3Q6NUS6 607 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 CYP2R1Q6VVX0 501 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 LIAT1Q6ZQX7 453 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 LRRC18Q8N456 261 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 CLDN22Q8N7P3 220 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 NECAP1Q8NC96 275 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 NFAM1Q8NET5 270 aaPredicted RBP3.47□□□□□ -1.85
MCF2-203ENST00000370576 OR4Q3Q8NH05 313 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 ERGIC1Q969X5 290 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 C8orf44Q96CB5 159 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 HIST1H2AHQ96KK5 128 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 SNX18Q96RF0 628 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 UBL7Q96S82 380 aaPredicted RBP3.47□□□□□ -1.85
MCF2-203ENST00000370576 MBOAT4Q96T53 435 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 HIST1H2AJQ99878 128 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 C2orf88Q9BSF0 95 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 FN3KQ9H479 309 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 CXorf36Q9H7Y0 433 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 LRTM1Q9HBL6 345 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 MLXIPLQ9NP71 852 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 CD320Q9NPF0 282 aa3.47□□□□□ -1.85
MCF2-203ENST00000370576 PNO1Q9NRX1 252 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms