RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 HOXB1P14653 301 aaPredicted RBP12.96□□□□□ -0.33
COL9A1-204ENST00000370496 ZNF23P17027 643 aa12.96□□□□□ -0.33
COL9A1-204ENST00000370496 NCMAPQ5T1S8 102 aa12.96□□□□□ -0.33
COL9A1-204ENST00000370496 ADAM5Q6NVV9 412 aa12.96□□□□□ -0.33
COL9A1-204ENST00000370496 ZFP1Q6P2D0 407 aa12.96□□□□□ -0.33
COL9A1-204ENST00000370496 ZNF704Q6ZNC4 412 aaPredicted RBP12.96□□□□□ -0.33
COL9A1-204ENST00000370496 ZNF627Q7L945 461 aa12.96□□□□□ -0.33
COL9A1-204ENST00000370496 CCDC36Q8IYA8 594 aa12.96□□□□□ -0.33
COL9A1-204ENST00000370496 C10orf67Q8IYJ2 551 aa12.96□□□□□ -0.33
COL9A1-204ENST00000370496 SLC22A24Q8N4F4 322 aa12.96□□□□□ -0.33
COL9A1-204ENST00000370496 HTRA1Q92743 480 aa12.96□□□□□ -0.33
COL9A1-204ENST00000370496 PLA2G12AQ9BZM1 189 aa12.96□□□□□ -0.33
COL9A1-204ENST00000370496 SYT4Q9H2B2 425 aa12.96□□□□□ -0.33
COL9A1-204ENST00000370496 HRNRQ86YZ3 2850 aaPredicted RBP12.96□□□□□ -0.33
COL9A1-204ENST00000370496 IGKV1D-43A0A0B4J1Z2 117 aa12.95□□□□□ -0.34
COL9A1-204ENST00000370496 SLC22A23A1A5C7 686 aa12.95□□□□□ -0.34
COL9A1-204ENST00000370496 ABCD4O14678 606 aa12.95□□□□□ -0.34
COL9A1-204ENST00000370496 IMPA2O14732 288 aa12.95□□□□□ -0.34
COL9A1-204ENST00000370496 AHCYL1O43865 530 aa12.95□□□□□ -0.34
COL9A1-204ENST00000370496 UBL3O95164 117 aa12.95□□□□□ -0.34
COL9A1-204ENST00000370496 RAB36O95755 333 aa12.95□□□□□ -0.34
COL9A1-204ENST00000370496 TXNDC12O95881 172 aa12.95□□□□□ -0.34
COL9A1-204ENST00000370496 HLA-HP01893 362 aa12.95□□□□□ -0.34
COL9A1-204ENST00000370496 OR8G3PP0DMU2 310 aa12.95□□□□□ -0.34
COL9A1-204ENST00000370496 ANXA8P13928 327 aa12.95□□□□□ -0.34
COL9A1-204ENST00000370496 PAX7P23759 505 aa12.95□□□□□ -0.34
COL9A1-204ENST00000370496 LOXP28300 417 aaPredicted RBP12.95□□□□□ -0.34
COL9A1-204ENST00000370496 GUCA1AP43080 201 aaPredicted RBP12.95□□□□□ -0.34
COL9A1-204ENST00000370496 ZNF133P52736 654 aaPredicted RBP12.95□□□□□ -0.34
COL9A1-204ENST00000370496 COX10Q12887 443 aa12.95□□□□□ -0.34
COL9A1-204ENST00000370496 NPRL3Q12980 569 aa12.95□□□□□ -0.34
COL9A1-204ENST00000370496 GSG1Q2KHT4 349 aa12.95□□□□□ -0.34
COL9A1-204ENST00000370496 SLC36A3Q495N2 470 aa12.95□□□□□ -0.34
COL9A1-204ENST00000370496 LEG1Q6P5S2 330 aa12.95□□□□□ -0.34
COL9A1-204ENST00000370496 AMIGO2Q86SJ2 522 aa12.95□□□□□ -0.34
COL9A1-204ENST00000370496 HIPK1Q86Z02 1210 aa12.95□□□□□ -0.34
COL9A1-204ENST00000370496 SDR9C7Q8NEX9 313 aa12.95□□□□□ -0.34
COL9A1-204ENST00000370496 KBTBD8Q8NFY9 601 aa12.95□□□□□ -0.34
COL9A1-204ENST00000370496 OR2T33Q8NG76 320 aa12.95□□□□□ -0.34
COL9A1-204ENST00000370496 OR8D4Q8NGM9 314 aa12.95□□□□□ -0.34
COL9A1-204ENST00000370496 OR5K1Q8NHB7 308 aa12.95□□□□□ -0.34
COL9A1-204ENST00000370496 LRTOMTQ8WZ04 291 aa12.95□□□□□ -0.34
COL9A1-204ENST00000370496 NMD3Q96D46 503 aaKnown RBP12.95□□□□□ -0.34
COL9A1-204ENST00000370496 NRBF2Q96F24 287 aa12.95□□□□□ -0.34
COL9A1-204ENST00000370496 SLC38A2Q96QD8 506 aa12.95□□□□□ -0.34
COL9A1-204ENST00000370496 KCNS3Q9BQ31 491 aa12.95□□□□□ -0.34
COL9A1-204ENST00000370496 TSSK6Q9BXA6 273 aa12.95□□□□□ -0.34
COL9A1-204ENST00000370496 RERGLQ9H628 205 aa12.95□□□□□ -0.34
COL9A1-204ENST00000370496 UBTD1Q9HAC8 227 aa12.95□□□□□ -0.34
COL9A1-204ENST00000370496 NTN4Q9HB63 628 aa12.95□□□□□ -0.34
COL9A1-204ENST00000370496 IL20Q9NYY1 176 aa12.95□□□□□ -0.34
COL9A1-204ENST00000370496 PRR14LQ5THK1 2151 aa12.95□□□□□ -0.34
COL9A1-204ENST00000370496 ZNF503-AS2A6NEH8 195 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 ARPC3O15145 178 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 IDH3BO43837 385 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 RENP00797 406 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 PRKACGP22612 351 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 PTAFRP25105 342 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 CD40P25942 277 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 CDAP32320 146 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 PTDSS1P48651 473 aaKnown RBP12.94□□□□□ -0.34
COL9A1-204ENST00000370496 IDH3GP51553 393 aaPredicted RBP12.94□□□□□ -0.34
COL9A1-204ENST00000370496 SPOCK1Q08629 439 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 NRN1LQ496H8 165 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 SLC35F1Q5T1Q4 408 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 DNM1P34Q6PK57 102 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 SLC25A47Q6Q0C1 308 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 CD300LDQ6UXZ3 194 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 PTCHD4Q6ZW05 846 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 SLC16A14Q7RTX9 510 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 MDP1Q86V88 176 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 ZDHHC13Q8IUH4 622 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 OR4K13Q8NH42 304 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 DNAJC9Q8WXX5 260 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 SEC61A2Q9H9S3 476 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 POU2F3Q9UKI9 436 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 APCP25054 2843 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 A0A1W2PPR1 153 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 DPRXA6NFQ7 191 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 CYSRT1A8MQ03 144 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 G3V2T6 193 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 BHLHE40O14503 412 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 SLC16A7O60669 478 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 IGFBP1P08833 259 aaPredicted RBP12.94□□□□□ -0.34
COL9A1-204ENST00000370496 HIST1H1CP16403 213 aaKnown RBP12.94□□□□□ -0.34
COL9A1-204ENST00000370496 CTLA4P16410 223 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 NPR2P20594 1047 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 POU1F1P28069 291 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 ARR3P36575 388 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 CDH11P55287 796 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 MRPS34P82930 218 aaKnown RBP12.94□□□□□ -0.34
COL9A1-204ENST00000370496 PIGFQ07326 219 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 SGCAQ16586 387 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 SLC36A2Q495M3 483 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 SLC22A25Q6T423 547 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 CDH24Q86UP0 819 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 SKA3Q8IX90 412 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 DEPDC4Q8N2C3 294 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 SVOPLQ8N434 492 aa12.94□□□□□ -0.34
COL9A1-204ENST00000370496 LRRC18Q8N456 261 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms