RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 MDFIC2A0A1B0GVS7 189 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 TMEM82A0PJX8 343 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 SMLR1H3BR10 107 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 SGCEO43556 437 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 TSFMP43897 325 aaKnown RBP11.81□□□□□ -0.52
PTPRK-207ENST00000368226 SRP9P49458 86 aaKnown RBP11.81□□□□□ -0.52
PTPRK-207ENST00000368226 IDH3GP51553 393 aaPredicted RBP11.81□□□□□ -0.52
PTPRK-207ENST00000368226 PMPCAQ10713 525 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 GPR176Q14439 515 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 C5orf46Q6UWT4 87 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 DLEU7Q6UYE1 221 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 LRRC56Q8IYG6 542 aaPredicted RBP11.81□□□□□ -0.52
PTPRK-207ENST00000368226 MAML2Q8IZL2 1156 aaPredicted RBP11.81□□□□□ -0.52
PTPRK-207ENST00000368226 ARL11Q969Q4 196 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 RNF167Q9H6Y7 350 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 MED17Q9NVC6 651 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 ZGLP1P0C6A0 271 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 PRKACAP17612 351 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 CCR6P51684 374 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 F2RL1P55085 397 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 TJP1Q07157 1748 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 RIPPLY1Q0D2K3 151 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 OR4A16Q8NH70 328 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 CD300AQ9UGN4 299 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 CDK5RAP2Q96SN8 1893 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 SCG5P05408 212 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 HIST1H1CP16403 213 aaKnown RBP11.81□□□□□ -0.52
PTPRK-207ENST00000368226 NOVA1P51513 510 aaKnown RBP11.81□□□□□ -0.52
PTPRK-207ENST00000368226 AKR1C1Q04828 323 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 ARHGAP11BQ3KRB8 267 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 XKR7Q5GH72 579 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 OR51E1Q8TCB6 317 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 AP1S3Q96PC3 154 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 TSSK2Q96PF2 358 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 METTL17Q9H7H0 456 aaPredicted RBP11.81□□□□□ -0.52
PTPRK-207ENST00000368226 ZFP57Q9NU63 452 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 ZNF346Q9UL40 294 aaKnown RBP11.81□□□□□ -0.52
PTPRK-207ENST00000368226 C19orf53Q9UNZ5 99 aaPredicted RBP11.81□□□□□ -0.52
PTPRK-207ENST00000368226 CORINQ9Y5Q5 1042 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 TMEM221A6NGB7 291 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 NKX6-3A6NJ46 265 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 PHF1O43189 567 aaPredicted RBP11.81□□□□□ -0.52
PTPRK-207ENST00000368226 YOD1Q5VVQ6 348 aaPredicted RBP11.81□□□□□ -0.52
PTPRK-207ENST00000368226 SLC7A5P1Q8MH63 180 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 TMEM99Q8N816 258 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 OR5M9Q8NGP3 310 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 ROBO4Q8WZ75 1007 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 SLC19A3Q9BZV2 496 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 TAS2R4Q9NYW5 299 aa11.81□□□□□ -0.52
PTPRK-207ENST00000368226 C5orf49A4QMS7 147 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 RFPL3O75679 317 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 GLCEO94923 617 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 APEX1P27695 318 aaKnown RBP11.8□□□□□ -0.52
PTPRK-207ENST00000368226 GNB1P62873 340 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 MRPS10P82664 201 aaKnown RBP11.8□□□□□ -0.52
PTPRK-207ENST00000368226 HTD2P86397 168 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 RUNX2Q13950 521 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 SSX2Q16385 188 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 STEAP3Q658P3 488 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 SLC22A25Q6T423 547 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 ANGPTL5Q86XS5 388 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 RDH10Q8IZV5 341 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 UCN3Q969E3 161 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 RANGRFQ9HD47 186 aaPredicted RBP11.8□□□□□ -0.52
PTPRK-207ENST00000368226 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.8□□□□□ -0.523e-6■■■■■ 36.9
PTPRK-207ENST00000368226 COPS3Q9UNS2 423 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 ACOT8O14734 319 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 CXCL13O43927 109 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 CLDN1O95832 211 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 RAB40ALP0C0E4 278 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 GLB1P16278 677 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 MRPL19P49406 292 aaKnown RBP11.8□□□□□ -0.52
PTPRK-207ENST00000368226 NPY4RP50391 375 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 CCR5P51681 352 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 LGALS4P56470 323 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 BAXQ07812 192 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 RAB40AQ8WXH6 277 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 MALSU1Q96EH3 234 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 RNF170Q96K19 258 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 CPNE5Q9HCH3 593 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 PLA2G3Q9NZ20 509 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 ASH2LQ9UBL3 628 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 EDARQ9UNE0 448 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 A0A1B0GTL3 188 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 SYT5O00445 386 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 PRRG2O14669 202 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 CHRNB1P11230 501 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 TPT1P13693 172 aaKnown RBP11.8□□□□□ -0.52
PTPRK-207ENST00000368226 CD22P20273 847 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 PDLIM3Q53GG5 364 aaPredicted RBP11.8□□□□□ -0.52
PTPRK-207ENST00000368226 SLC22A24Q8N4F4 322 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 GJC3Q8NFK1 279 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 ING1Q9UK53 422 aaPredicted RBP11.8□□□□□ -0.52
PTPRK-207ENST00000368226 MED6O75586 246 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 NSA2O95478 260 aaKnown RBP11.8□□□□□ -0.52
PTPRK-207ENST00000368226 LGI1O95970 557 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 IFNA10P01566 189 aa11.8□□□□□ -0.52
PTPRK-207ENST00000368226 SRSF5Q13243 272 aaKnown RBP11.8□□□□□ -0.52
PTPRK-207ENST00000368226 EBPQ15125 230 aaKnown RBP11.8□□□□□ -0.52
PTPRK-207ENST00000368226 PAQR6Q6TCH4 344 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms