RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 LINC01599Q8WXQ3 324 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 TGFBR1P36897 503 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 MAP2K6P52564 334 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 B4GALNT1Q00973 533 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 EXOSC2Q13868 293 aaKnown RBP10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 MEP1BQ16820 701 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 OR51S1Q8NGJ8 323 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 BCL7CQ8WUZ0 217 aaPredicted RBP10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 FBXL2Q9UKC9 423 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 NEU3Q9UQ49 428 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 EMC9Q9Y3B6 208 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 CIB4A0PJX0 185 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 HTR3BO95264 441 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 CXCL10P02778 98 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 CLDN12P56749 244 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 A4GNTQ9UNA3 340 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 IL33O95760 270 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 F13BP05160 661 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 MSX1P28360 303 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 DEFB103AP81534 67 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 CDK5Q00535 292 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 ST8SIA4Q92187 359 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 HRH4Q9H3N8 390 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 PLPP2O43688 288 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 ZFAND5O76080 213 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 RACK1P63244 317 aaKnown RBP10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 ECH1Q13011 328 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 FAM111BQ6SJ93 734 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 OR51B4Q9Y5P0 310 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 ROS1P08922 2347 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 LUMP51884 338 aaPredicted RBP10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 ACSM1Q08AH1 577 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 SLC14A1Q13336 389 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 SSX1Q16384 188 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 NIPSNAP3BQ9BS92 247 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 IFNA10P01566 189 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 ELAVL1Q15717 326 aaKnown RBP10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 MMP21Q8N119 569 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 FAM71F1Q96KD3 344 aaPredicted RBP10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 RLFQ13129 1914 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 MEIS3P1A6NDR6 274 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 AQP8O94778 261 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 IGFBP1P08833 259 aaPredicted RBP10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 SLC25A1P53007 311 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 MSMO1Q15800 293 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 SIGIRRQ6IA17 410 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 TTC9Q92623 222 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 HRASLSQ9HDD0 168 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 KPTNQ9Y664 436 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 MZT1Q08AG7 82 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 RSPO2Q6UXX9 243 aaPredicted RBP10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 VN1R2Q8NFZ6 395 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 B3GALT1Q9Y5Z6 326 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 SHANK1Q9Y566 2161 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 LRP5LA4QPB2 252 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 B3GALT4O96024 378 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 ALDH3B1P43353 468 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 PLGLB1Q02325 96 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 C3orf49Q96BT1 292 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 RBM24Q9BX46 236 aaKnown RBP10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 VN1R3Q9BXE9 311 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 NXF2Q9GZY0 626 aaKnown RBP10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 PARPBPQ9NWS1 579 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 YARS2Q9Y2Z4 477 aaKnown RBP10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 CFIP05156 583 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 CLDN2P57739 230 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 SLC30A7Q8NEW0 376 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 DOK4Q8TEW6 326 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 ACOXLQ9NUZ1 547 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 HCSTQ9UBK5 93 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 LIMS3P0CW19 117 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 LIMS4P0CW20 117 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 HIST1H1CP16403 213 aaKnown RBP10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 TUBG1P23258 451 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 TLE4Q04727 773 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 SNTB1Q13884 538 aaKnown RBP10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 IRF3Q14653 427 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 POMT2Q9UKY4 750 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 INHBBP09529 407 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 RBM39Q14498 530 aaKnown RBP10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 ZNF674Q2M3X9 581 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 OR1S1Q8NH92 325 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 SLC6A18Q96N87 628 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 CCL27Q9Y4X3 112 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 HCFC2Q9Y5Z7 792 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 HIDE1A8MVS5 230 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 F5H5K5 113 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 EIF1BO60739 113 aaKnown RBP10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 LCATP04180 440 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 SPNP16150 400 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 VASPP50552 380 aaPredicted RBP10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 GPR85P60893 370 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 P4HA3Q7Z4N8 544 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 MALSU1Q96EH3 234 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 SLC35A4Q96G79 324 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 NKX6-2Q9C056 277 aaPredicted RBP10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 ZNF275Q9NSD4 429 aaPredicted RBP10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 HRH3Q9Y5N1 445 aa10.82□□□□□ -0.68
CDC42BPA-202ENST00000366764 H3BML4 177 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms