RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 G6PDP11413 515 aa7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 GRPRP30550 384 aa7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 DNAJB13P59910 316 aa7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 FGF12P61328 243 aa7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 GNG11P61952 73 aa7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 EGR3Q06889 387 aa7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 TMEM155Q4W5P6 130 aa7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 C6orf136Q5SQH8 315 aa7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 THEM4Q5T1C6 240 aa7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 ATAD3BQ5T9A4 648 aa7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 IL23RQ5VWK5 629 aa7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 WBP2NLQ6ICG8 309 aa7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 FDX2Q6P4F2 183 aa7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 LRFN4Q6PJG9 635 aa7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 C6orf89Q6UWU4 347 aa7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 SERPINA11Q86U17 422 aa7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 C1orf174Q8IYL3 243 aa7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 CPEB3Q8NE35 698 aaKnown RBP7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 OR4A15Q8NGL6 344 aa7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 PNPT1Q8TCS8 783 aaKnown RBP7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 STK35Q8TDR2 534 aa7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 TWIST2Q8WVJ9 160 aa7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 DYRK2Q92630 601 aa7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 PHF21AQ96BD5 680 aa7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 MARS2Q96GW9 593 aaKnown RBP7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 LRR1Q96L50 414 aa7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 ARHGDIGQ99819 225 aa7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 SLC30A2Q9BRI3 323 aa7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 MECRQ9BV79 373 aa7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 CDADC1Q9BWV3 514 aa7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 C16orf95Q9H693 158 aa7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 DENND2DQ9H6A0 471 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 MSL2Q9HCI7 577 aa7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 ATAD3AQ9NVI7 634 aa7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 OR5V1Q9UGF6 321 aa7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 GPR160Q9UJ42 338 aa7.06□□□□□ -1.28
HMGB1P39-201ENST00000366304 ZNF816-ZNF321PA0A0X1KG74 233 aa7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 KIR2DS1A0A191URI9 304 aa7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 H3BQF6 201 aa7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 TNFRSF13BO14836 293 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 TGDSO95455 350 aa7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 MPIG6BO95866 241 aa7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 CD55P08174 381 aa7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 DRD4P21917 467 aa7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 ECHS1P30084 290 aa7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 ARRB2P32121 409 aa7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 RPL3P39023 403 aaKnown RBP7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 PCBP3P57721 371 aaKnown RBP7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 SELENOVP59797 346 aa7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 BTG1P62324 171 aa7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 COL10A1Q03692 680 aa7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 PMS2P3Q13401 168 aa7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 SMU1Q2TAY7 513 aa7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 ESCO2Q56NI9 601 aa7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 CFAP157Q5JU67 520 aa7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 FAM205BPQ63HN1 556 aa7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 LRRN1Q6UXK5 716 aa7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 Q6ZR03 302 aa7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 LYG1Q8N1E2 194 aa7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 MIER2Q8N344 545 aa7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 SLC22A24Q8N4F4 322 aa7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 KLHL36Q8N4N3 616 aa7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 SPICQ8N5J4 248 aa7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 ZNF283Q8N7M2 679 aa7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 C11orf44Q8N8P7 122 aa7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 OR1J1Q8NGS3 322 aa7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 RAB40AQ8WXH6 277 aa7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 WWC2-AS2Q96NR7 200 aa7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 TRNT1Q96Q11 434 aaKnown RBP7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 SSBP3Q9BWW4 388 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 ULBP2Q9BZM5 246 aa7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 RAB17Q9H0T7 212 aa7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 CDH20Q9HBT6 801 aa7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 SIGLEC9Q9Y336 463 aa7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 POMT1Q9Y6A1 747 aa7.05□□□□□ -1.28
HMGB1P39-201ENST00000366304 LOC100509620A0A075B734 347 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 CENPVL3A0A0U1RRI6 287 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 TMEM114B3SHH9 223 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 C22orf46C9J442 243 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 LRRN3E7EW58 273 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 RNASET2O00584 256 aaKnown RBP7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 AIM2O14862 343 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 DHHO43323 396 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 PLIN3O60664 434 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 GLRA3O75311 464 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 LYPLA1O75608 230 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 CPSF4O95639 269 aaKnown RBP7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 PPP1R3DO95685 299 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 AGR2O95994 175 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 MMP7P09237 267 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 IL7RP16871 459 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 PRPS1L1P21108 318 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 UQCRC2P22695 453 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 LSP1P33241 339 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 IER3P46695 156 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 SLC3A1Q07837 685 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 FOXB2Q5VYV0 432 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 LRRC74BQ6ZQY2 392 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 RFPL4BQ6ZWI9 263 aa7.04□□□□□ -1.28
HMGB1P39-201ENST00000366304 H1FNTQ75WM6 255 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms