RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 HEXBP07686 556 aa2.1□□□□□ -2.07
RNU4-28P-201ENST00000364739 OR56A5P0C7T3 313 aa2.1□□□□□ -2.07
RNU4-28P-201ENST00000364739 HRH1P35367 487 aa2.1□□□□□ -2.07
RNU4-28P-201ENST00000364739 GRIA1P42261 906 aa2.1□□□□□ -2.07
RNU4-28P-201ENST00000364739 KRTAP12-3P60328 96 aa2.1□□□□□ -2.07
RNU4-28P-201ENST00000364739 MAB21L1Q13394 359 aa2.1□□□□□ -2.07
RNU4-28P-201ENST00000364739 PRPSAP1Q14558 356 aa2.1□□□□□ -2.07
RNU4-28P-201ENST00000364739 TMEM179Q6ZVK1 233 aa2.1□□□□□ -2.07
RNU4-28P-201ENST00000364739 ZNF382Q96SR6 550 aa2.1□□□□□ -2.07
RNU4-28P-201ENST00000364739 COPS8Q99627 209 aa2.1□□□□□ -2.07
RNU4-28P-201ENST00000364739 TMEM59Q9BXS4 323 aa2.1□□□□□ -2.07
RNU4-28P-201ENST00000364739 ISYNA1Q9NPH2 558 aa2.1□□□□□ -2.07
RNU4-28P-201ENST00000364739 SCN4AP35499 1836 aa2.1□□□□□ -2.07
RNU4-28P-201ENST00000364739 ZNF850A8MQ14 1090 aa2.09□□□□□ -2.07
RNU4-28P-201ENST00000364739 CCL21O00585 134 aa2.09□□□□□ -2.07
RNU4-28P-201ENST00000364739 RP2O75695 350 aa2.09□□□□□ -2.07
RNU4-28P-201ENST00000364739 IGKV1D-16P01601 117 aa2.09□□□□□ -2.07
RNU4-28P-201ENST00000364739 CEACAM6P40199 344 aa2.09□□□□□ -2.07
RNU4-28P-201ENST00000364739 MAGEA8P43361 318 aa2.09□□□□□ -2.07
RNU4-28P-201ENST00000364739 CCT3P49368 545 aaKnown RBP2.09□□□□□ -2.07
RNU4-28P-201ENST00000364739 ZNF92Q03936 586 aa2.09□□□□□ -2.07
RNU4-28P-201ENST00000364739 FGL1Q08830 312 aa2.09□□□□□ -2.07
RNU4-28P-201ENST00000364739 ZNF816Q0VGE8 651 aaPredicted RBP2.09□□□□□ -2.07
RNU4-28P-201ENST00000364739 SAXO2Q658L1 398 aa2.09□□□□□ -2.07
RNU4-28P-201ENST00000364739 SLC25A24Q6NUK1 477 aa2.09□□□□□ -2.07
RNU4-28P-201ENST00000364739 OR4S2Q8NH73 311 aa2.09□□□□□ -2.07
RNU4-28P-201ENST00000364739 FAM3DQ96BQ1 224 aa2.09□□□□□ -2.07
RNU4-28P-201ENST00000364739 CCT7Q99832 543 aa2.09□□□□□ -2.07
RNU4-28P-201ENST00000364739 TIMM29Q9BSF4 260 aa2.09□□□□□ -2.07
RNU4-28P-201ENST00000364739 TCHPQ9BT92 498 aa2.09□□□□□ -2.07
RNU4-28P-201ENST00000364739 ZSCAN5AQ9BUG6 496 aa2.09□□□□□ -2.07
RNU4-28P-201ENST00000364739 SYNDIG1Q9H7V2 258 aa2.09□□□□□ -2.07
RNU4-28P-201ENST00000364739 CTNNA3Q9UI47 895 aa2.09□□□□□ -2.07
RNU4-28P-201ENST00000364739 ADAM28Q9UKQ2 775 aa2.09□□□□□ -2.07
RNU4-28P-201ENST00000364739 SDK2Q58EX2 2172 aa2.09□□□□□ -2.08
RNU4-28P-201ENST00000364739 SPECC1L-ADORA2AF8WAN1 911 aa2.08□□□□□ -2.08
RNU4-28P-201ENST00000364739 CDRT1O95170 752 aa2.08□□□□□ -2.08
RNU4-28P-201ENST00000364739 C1orf105O95561 183 aa2.08□□□□□ -2.08
RNU4-28P-201ENST00000364739 HLA-DPB1P04440 258 aa2.08□□□□□ -2.08
RNU4-28P-201ENST00000364739 ZNF806P0C7X5 589 aa2.08□□□□□ -2.08
RNU4-28P-201ENST00000364739 MAS1LP35410 378 aa2.08□□□□□ -2.08
RNU4-28P-201ENST00000364739 SERPINB5P36952 375 aa2.08□□□□□ -2.08
RNU4-28P-201ENST00000364739 NUTF2P61970 127 aaKnown RBP2.08□□□□□ -2.08
RNU4-28P-201ENST00000364739 OGDHQ02218 1023 aa2.08□□□□□ -2.08
RNU4-28P-201ENST00000364739 SPECC1LQ69YQ0 1117 aa2.08□□□□□ -2.08
RNU4-28P-201ENST00000364739 ABHD3Q8WU67 409 aa2.08□□□□□ -2.08
RNU4-28P-201ENST00000364739 RLN3Q8WXF3 142 aa2.08□□□□□ -2.08
RNU4-28P-201ENST00000364739 ZNF681Q96N22 645 aa2.08□□□□□ -2.08
RNU4-28P-201ENST00000364739 RPRD1AQ96P16 312 aaPredicted RBP2.08□□□□□ -2.08
RNU4-28P-201ENST00000364739 SH3GL3Q99963 347 aa2.08□□□□□ -2.08
RNU4-28P-201ENST00000364739 TRIM62Q9BVG3 475 aa2.08□□□□□ -2.08
RNU4-28P-201ENST00000364739 FN3KRPQ9HA64 309 aa2.08□□□□□ -2.08
RNU4-28P-201ENST00000364739 NMRAL1Q9HBL8 299 aa2.08□□□□□ -2.08
RNU4-28P-201ENST00000364739 EPS15L1Q9UBC2 864 aa2.08□□□□□ -2.08
RNU4-28P-201ENST00000364739 ZNF229Q9UJW7 825 aa2.08□□□□□ -2.08
RNU4-28P-201ENST00000364739 CDH9Q9ULB4 789 aa2.08□□□□□ -2.08
RNU4-28P-201ENST00000364739 AP1M2Q9Y6Q5 423 aa2.08□□□□□ -2.08
RNU4-28P-201ENST00000364739 CAMTA1Q9Y6Y1 1673 aa2.07□□□□□ -2.08
RNU4-28P-201ENST00000364739 TRAV26-1A0A087WT03 109 aa2.07□□□□□ -2.08
RNU4-28P-201ENST00000364739 SNNO75324 88 aaPredicted RBP2.07□□□□□ -2.08
RNU4-28P-201ENST00000364739 ERLIN2O94905 339 aa2.07□□□□□ -2.08
RNU4-28P-201ENST00000364739 CD34P28906 385 aa2.07□□□□□ -2.08
RNU4-28P-201ENST00000364739 CD1CP29017 333 aa2.07□□□□□ -2.08
RNU4-28P-201ENST00000364739 ARG2P78540 354 aa2.07□□□□□ -2.08
RNU4-28P-201ENST00000364739 SLC39A6Q13433 755 aa2.07□□□□□ -2.08
RNU4-28P-201ENST00000364739 RABL6Q3YEC7 729 aaPredicted RBP2.07□□□□□ -2.08
RNU4-28P-201ENST00000364739 SMUG1Q53HV7 270 aa2.07□□□□□ -2.08
RNU4-28P-201ENST00000364739 GALNT17Q6IS24 598 aa2.07□□□□□ -2.08
RNU4-28P-201ENST00000364739 TMEM205Q6UW68 189 aa2.07□□□□□ -2.08
RNU4-28P-201ENST00000364739 HDDC2Q7Z4H3 204 aa2.07□□□□□ -2.08
RNU4-28P-201ENST00000364739 GMCL1P1Q8NEA9 526 aa2.07□□□□□ -2.08
RNU4-28P-201ENST00000364739 CREB3L1Q96BA8 519 aa2.07□□□□□ -2.08
RNU4-28P-201ENST00000364739 COQ2Q96H96 371 aa2.07□□□□□ -2.08
RNU4-28P-201ENST00000364739 NARS2Q96I59 477 aaKnown RBP2.07□□□□□ -2.08
RNU4-28P-201ENST00000364739 RNF157Q96PX1 679 aa2.07□□□□□ -2.08
RNU4-28P-201ENST00000364739 CNN2Q99439 309 aaKnown RBP2.07□□□□□ -2.08
RNU4-28P-201ENST00000364739 P2RX4Q99571 388 aa2.07□□□□□ -2.08
RNU4-28P-201ENST00000364739 DOK1Q99704 481 aa2.07□□□□□ -2.08
RNU4-28P-201ENST00000364739 ERP44Q9BS26 406 aa2.07□□□□□ -2.08
RNU4-28P-201ENST00000364739 SLC25A2Q9BXI2 301 aa2.07□□□□□ -2.08
RNU4-28P-201ENST00000364739 MFFQ9GZY8 342 aa2.07□□□□□ -2.08
RNU4-28P-201ENST00000364739 UBE2ZQ9H832 354 aaPredicted RBP2.07□□□□□ -2.08
RNU4-28P-201ENST00000364739 S4R3C0 116 aa2.07□□□□□ -2.08
RNU4-28P-201ENST00000364739 PTPRTO14522 1441 aa2.07□□□□□ -2.08
RNU4-28P-201ENST00000364739 ADAMTS13Q76LX8 1427 aa2.07□□□□□ -2.08
RNU4-28P-201ENST00000364739 FBN1P35555 2871 aaKnown RBP2.07□□□□□ -2.08
RNU4-28P-201ENST00000364739 SHROOM3Q8TF72 1996 aa2.07□□□□□ -2.08
RNU4-28P-201ENST00000364739 TSPOAP1O95153 1857 aa2.06□□□□□ -2.08
RNU4-28P-201ENST00000364739 IGLV1-50A0A075B6I6 118 aa2.06□□□□□ -2.08
RNU4-28P-201ENST00000364739 IGKV3D-11A0A0A0MRZ8 115 aa2.06□□□□□ -2.08
RNU4-28P-201ENST00000364739 A0A1B0GVL5 298 aa2.06□□□□□ -2.08
RNU4-28P-201ENST00000364739 F6UB75 175 aa2.06□□□□□ -2.08
RNU4-28P-201ENST00000364739 EIF3GO75821 320 aaKnown RBP eCLIP2.06□□□□□ -2.08
RNU4-28P-201ENST00000364739 CLDN9O95484 217 aa2.06□□□□□ -2.08
RNU4-28P-201ENST00000364739 CCNE2O96020 404 aa2.06□□□□□ -2.08
RNU4-28P-201ENST00000364739 IL4P05112 153 aa2.06□□□□□ -2.08
RNU4-28P-201ENST00000364739 HSD17B2P37059 387 aa2.06□□□□□ -2.08
RNU4-28P-201ENST00000364739 OPRK1P41145 380 aa2.06□□□□□ -2.08
RNU4-28P-201ENST00000364739 KIR3DL2P43630 455 aa2.06□□□□□ -2.08
RNU4-28P-201ENST00000364739 UGT2B15P54855 530 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms