RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 RAB3AP20336 220 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 GNRHRP30968 328 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 FAM189A2Q15884 450 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 CORO6Q6QEF8 472 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 SLC16A9Q7RTY1 509 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 NUDCD2Q8WVJ2 157 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 PHYHIPQ92561 330 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 HDAC8Q9BY41 377 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 NKX6-2Q9C056 277 aaPredicted RBP12.7□□□□□ -0.38
COL6A1-201ENST00000361866 PPP4R1LQ9P1A2 415 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 ETV7Q9Y603 341 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 PIAS3Q9Y6X2 628 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 PMS2P2O95744 297 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 CCINQ13939 588 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 UBE3DQ7Z6J8 389 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 GABRG1Q8N1C3 465 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 TCEAL3Q969E4 200 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 WDR34Q96EX3 536 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 SENP5Q96HI0 755 aaPredicted RBP12.7□□□□□ -0.38
COL6A1-201ENST00000361866 ADGRL4Q9HBW9 690 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 ZNF304Q9HCX3 659 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 TAS2R4Q9NYW5 299 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 EHFQ9NZC4 300 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 HIF3AQ9Y2N7 669 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 CENPVL1A0A0U1RR11 272 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 SIGLEC5O15389 551 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 GABRR1P24046 479 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 BDKRB2P30411 391 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 RAB38P57729 211 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 SIGLEC14Q08ET2 396 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 SNTB1Q13884 538 aaKnown RBP12.7□□□□□ -0.38
COL6A1-201ENST00000361866 SERTAD2Q14140 314 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 SLC36A2Q495M3 483 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 TMEM156Q8N614 296 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 ZNF565Q8N9K5 539 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 OR4S1Q8NGB4 309 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 OR5D14Q8NGL3 314 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 OR51Q1Q8NH59 317 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 RSC1A1Q92681 617 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 ZNF775Q96BV0 537 aaPredicted RBP12.7□□□□□ -0.38
COL6A1-201ENST00000361866 PELOQ9BRX2 385 aaKnown RBP12.7□□□□□ -0.38
COL6A1-201ENST00000361866 SLC5A7Q9GZV3 580 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 NKX2-4Q9H2Z4 354 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 PRMT8Q9NR22 394 aaPredicted RBP12.7□□□□□ -0.38
COL6A1-201ENST00000361866 MOKQ9UQ07 419 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 SERPINA2P20848 420 aa12.69□□□□□ -0.38
COL6A1-201ENST00000361866 EOGTQ5NDL2 527 aa12.69□□□□□ -0.38
COL6A1-201ENST00000361866 PAPD4Q6PIY7 484 aaKnown RBP12.69□□□□□ -0.38
COL6A1-201ENST00000361866 MEX3BQ6ZN04 569 aaKnown RBP12.69□□□□□ -0.38
COL6A1-201ENST00000361866 TET1Q8NFU7 2136 aa12.69□□□□□ -0.38
COL6A1-201ENST00000361866 SPPL3Q8TCT6 385 aa12.69□□□□□ -0.38
COL6A1-201ENST00000361866 MAP3K3Q99759 626 aa12.69□□□□□ -0.38
COL6A1-201ENST00000361866 TRAF4Q9BUZ4 470 aaPredicted RBP12.69□□□□□ -0.38
COL6A1-201ENST00000361866 DNTTIP1Q9H147 329 aa12.69□□□□□ -0.38
COL6A1-201ENST00000361866 THAP10Q9P2Z0 257 aaPredicted RBP12.69□□□□□ -0.38
COL6A1-201ENST00000361866 PRAMEF27A3QJZ7 478 aa12.69□□□□□ -0.38
COL6A1-201ENST00000361866 CEACAM5P06731 702 aa12.69□□□□□ -0.38
COL6A1-201ENST00000361866 OR4E1P0C645 316 aa12.69□□□□□ -0.38
COL6A1-201ENST00000361866 TBXA2RP21731 343 aa12.69□□□□□ -0.38
COL6A1-201ENST00000361866 FBLP22087 321 aaKnown RBP12.69□□□□□ -0.38
COL6A1-201ENST00000361866 TSFMP43897 325 aaKnown RBP12.69□□□□□ -0.38
COL6A1-201ENST00000361866 EPHA4P54764 986 aa12.69□□□□□ -0.38
COL6A1-201ENST00000361866 GNMTQ14749 295 aa12.69□□□□□ -0.38
COL6A1-201ENST00000361866 GLDNQ6ZMI3 551 aaPredicted RBP12.69□□□□□ -0.38
COL6A1-201ENST00000361866 P4HA3Q7Z4N8 544 aa12.69□□□□□ -0.38
COL6A1-201ENST00000361866 OR4C3Q8NH37 302 aa12.69□□□□□ -0.38
COL6A1-201ENST00000361866 MIB2Q96AX9 1013 aa12.69□□□□□ -0.38
COL6A1-201ENST00000361866 C20orf24Q9BUV8 137 aa12.69□□□□□ -0.38
COL6A1-201ENST00000361866 EMC6Q9BV81 110 aa12.69□□□□□ -0.38
COL6A1-201ENST00000361866 KCNK15Q9H427 330 aa12.69□□□□□ -0.38
COL6A1-201ENST00000361866 KCNJ16Q9NPI9 418 aa12.69□□□□□ -0.38
COL6A1-201ENST00000361866 SLC22A7Q9Y694 548 aa12.69□□□□□ -0.38
COL6A1-201ENST00000361866 RNF215Q9Y6U7 377 aa12.69□□□□□ -0.38
COL6A1-201ENST00000361866 CFDP00746 253 aaPredicted RBP12.69□□□□□ -0.38
COL6A1-201ENST00000361866 CD53P19397 219 aa12.69□□□□□ -0.38
COL6A1-201ENST00000361866 AVPR2P30518 371 aa12.69□□□□□ -0.38
COL6A1-201ENST00000361866 SNRPNP63162 240 aaKnown RBP12.69□□□□□ -0.38
COL6A1-201ENST00000361866 MESP2Q0VG99 397 aa12.69□□□□□ -0.38
COL6A1-201ENST00000361866 HLXQ14774 488 aaPredicted RBP12.69□□□□□ -0.38
COL6A1-201ENST00000361866 DEFB133Q30KQ1 61 aa12.69□□□□□ -0.38
COL6A1-201ENST00000361866 EID2Q8N6I1 236 aa12.69□□□□□ -0.38
COL6A1-201ENST00000361866 OR2G2Q8NGZ5 317 aa12.69□□□□□ -0.38
COL6A1-201ENST00000361866 FBXW5Q969U6 566 aa12.69□□□□□ -0.38
COL6A1-201ENST00000361866 SLAMF9Q96A28 289 aa12.69□□□□□ -0.38
COL6A1-201ENST00000361866 SLC25A21Q9BQT8 299 aaPredicted RBP12.69□□□□□ -0.38
COL6A1-201ENST00000361866 TINAGL1Q9GZM7 467 aaPredicted RBP12.69□□□□□ -0.38
COL6A1-201ENST00000361866 BANF2Q9H503 90 aa12.69□□□□□ -0.38
COL6A1-201ENST00000361866 OR6C68A6NDL8 312 aa12.68□□□□□ -0.38
COL6A1-201ENST00000361866 OR2T1O43869 369 aa12.68□□□□□ -0.38
COL6A1-201ENST00000361866 ADRA2AP08913 450 aa12.68□□□□□ -0.38
COL6A1-201ENST00000361866 SRSF5Q13243 272 aaKnown RBP12.68□□□□□ -0.38
COL6A1-201ENST00000361866 MUC20Q8N307 709 aaPredicted RBP12.68□□□□□ -0.38
COL6A1-201ENST00000361866 OR11H4Q8NGC9 324 aa12.68□□□□□ -0.38
COL6A1-201ENST00000361866 SLC37A2Q8TED4 501 aa12.68□□□□□ -0.38
COL6A1-201ENST00000361866 PPP1R1CQ8WVI7 109 aa12.68□□□□□ -0.38
COL6A1-201ENST00000361866 RBM24Q9BX46 236 aaKnown RBP12.68□□□□□ -0.38
COL6A1-201ENST00000361866 COA3Q9Y2R0 106 aaPredicted RBP12.68□□□□□ -0.38
COL6A1-201ENST00000361866 BRWD3Q6RI45 1802 aa12.68□□□□□ -0.38
COL6A1-201ENST00000361866 UNC13CQ8NB66 2214 aa12.68□□□□□ -0.38
COL6A1-201ENST00000361866 TRAV1-2A0A0B4J238 106 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms